Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:56:36 (13570): wrapper (7.7.26015): starting
07:56:36 (13570): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 07:56:36] Arguments: --nthreads 8
[2026-04-19 07:56:36] Threads: 8
[2026-04-19 07:56:36] Checking for CVMFS
[2026-04-19 07:56:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 07:56:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 07:56:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 07:56:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 07:56:39] 2.11.2.0 32757 5092 96576 158609 2 151 21701912 25165824 1060 130560 0 1395025 99.504 4992035 5038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 07:56:39] CVMFS is ok
[2026-04-19 07:56:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 07:56:39] Checking for apptainer binary...
[2026-04-19 07:56:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 07:56:39] Running /usr/bin/apptainer --version
[2026-04-19 07:56:40] apptainer version 1.3.2-1.el7
[2026-04-19 07:56:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 07:56:45] cg-vwn430.simple-grid.lan
[2026-04-19 07:56:45] apptainer works
[2026-04-19 07:56:45] Set ATHENA_PROC_NUMBER=8
[2026-04-19 07:56:45] Set ATHENA_CORE_NUMBER=8
[2026-04-19 07:56:45] Starting ATLAS job with PandaID=7101002076
[2026-04-19 07:56:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 15:15:54]  *** The last 200 lines of the pilot log: ***
[2026-04-19 15:15:54] 2026-04-19 13:14:52,104 | INFO     | log transfer has been attempted: DONE
[2026-04-19 15:15:54] 2026-04-19 13:14:52,105 | INFO     | job 7101002076 has finished - writing final server update
[2026-04-19 15:15:54] 2026-04-19 13:14:52,105 | INFO     | total number of processed events: 400 (read)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,107 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7101002076/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,108 | INFO     | extracted standard info from prmon json
[2026-04-19 15:15:54] 2026-04-19 13:14:52,108 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 15:15:54] 2026-04-19 13:14:52,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 15:15:54] 2026-04-19 13:14:52,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 15:15:54] 2026-04-19 13:14:52,116 | INFO     | fitting pss+swap vs Time
[2026-04-19 15:15:54] 2026-04-19 13:14:52,117 | INFO     | sum of square deviations: 22809618370.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,132 | INFO     | sum of deviations: 212404447381.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,132 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,132 | INFO     | mean y: 2511461.603818616
[2026-04-19 15:15:54] 2026-04-19 13:14:52,132 | INFO     | intersect: 2511461.603818616
[2026-04-19 15:15:54] 2026-04-19 13:14:52,133 | INFO     | chi2: 9.023886127907064
[2026-04-19 15:15:54] 2026-04-19 13:14:52,134 | INFO     | sum of square deviations: 22002747427.5
[2026-04-19 15:15:54] 2026-04-19 13:14:52,139 | INFO     | sum of deviations: 237516594504.00003
[2026-04-19 15:15:54] 2026-04-19 13:14:52,139 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,139 | INFO     | mean y: 2516155.9758454105
[2026-04-19 15:15:54] 2026-04-19 13:14:52,139 | INFO     | intersect: 2516155.9758454105
[2026-04-19 15:15:54] 2026-04-19 13:14:52,140 | INFO     | chi2: 8.302467387900544
[2026-04-19 15:15:54] 2026-04-19 13:14:52,140 | INFO     | current chi2=8.302467387900544 (change=7.994546138780241 %)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,140 | INFO     | right removable region: 413
[2026-04-19 15:15:54] 2026-04-19 13:14:52,141 | INFO     | sum of square deviations: 22002747427.5
[2026-04-19 15:15:54] 2026-04-19 13:14:52,146 | INFO     | sum of deviations: 57085957265.00009
[2026-04-19 15:15:54] 2026-04-19 13:14:52,146 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,146 | INFO     | mean y: 2540810.106280193
[2026-04-19 15:15:54] 2026-04-19 13:14:52,146 | INFO     | intersect: 2540810.106280193
[2026-04-19 15:15:54] 2026-04-19 13:14:52,147 | INFO     | chi2: 3.87966017599357
[2026-04-19 15:15:54] 2026-04-19 13:14:52,147 | INFO     | current chi2=3.87966017599357 (change=57.006769356326195 %)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,148 | INFO     | sum of square deviations: 21215132660.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,155 | INFO     | sum of deviations: -59415188280.000015
[2026-04-19 15:15:54] 2026-04-19 13:14:52,155 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,155 | INFO     | mean y: 2563349.2860635696
[2026-04-19 15:15:54] 2026-04-19 13:14:52,155 | INFO     | intersect: 2563349.2860635696
[2026-04-19 15:15:54] 2026-04-19 13:14:52,156 | INFO     | chi2: 1.09803448819761
[2026-04-19 15:15:54] 2026-04-19 13:14:52,156 | INFO     | current chi2=1.09803448819761 (change=71.69766323885811 %)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,157 | INFO     | sum of square deviations: 20446541505.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,162 | INFO     | sum of deviations: -84171218714.50002
[2026-04-19 15:15:54] 2026-04-19 13:14:52,162 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,162 | INFO     | mean y: 2568247.339108911
[2026-04-19 15:15:54] 2026-04-19 13:14:52,162 | INFO     | intersect: 2568247.339108911
[2026-04-19 15:15:54] 2026-04-19 13:14:52,163 | INFO     | chi2: 0.9356391471785607
[2026-04-19 15:15:54] 2026-04-19 13:14:52,163 | INFO     | current chi2=0.9356391471785607 (change=14.789639375136238 %)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,163 | INFO     | left removable region: 15
[2026-04-19 15:15:54] 2026-04-19 13:14:52,164 | INFO     | sum of square deviations: 19549015839.5
[2026-04-19 15:15:54] 2026-04-19 13:14:52,173 | INFO     | sum of deviations: -56432179273.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,173 | INFO     | mean x (centered): 0.0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,174 | INFO     | mean y: 2573833.3969849246
[2026-04-19 15:15:54] 2026-04-19 13:14:52,174 | INFO     | intersect: 2573833.3969849246
[2026-04-19 15:15:54] 2026-04-19 13:14:52,174 | INFO     | chi2: 0.1531824704411749
[2026-04-19 15:15:54] 2026-04-19 13:14:52,175 | INFO     | current memory leak: -2.89 B/s (using 398 data points, chi2=0.15)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,175 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,175 | INFO     | ..............................
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . Timing measurements:
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . get job = 0 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . initial setup = 119 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . payload setup = 217 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . stage-in = 0 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . payload execution = 25670 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . stage-out = 3 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | . log creation = 1 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,176 | INFO     | ..............................
[2026-04-19 15:15:54] 2026-04-19 13:14:52,712 | INFO     | 
[2026-04-19 15:15:54] 2026-04-19 13:14:52,713 | INFO     | job summary report
[2026-04-19 15:15:54] 2026-04-19 13:14:52,713 | INFO     | --------------------------------------------------
[2026-04-19 15:15:54] 2026-04-19 13:14:52,713 | INFO     | PanDA job id: 7101002076
[2026-04-19 15:15:54] 2026-04-19 13:14:52,713 | INFO     | task id: 49820244
[2026-04-19 15:15:54] 2026-04-19 13:14:52,713 | INFO     | errors: (none)
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | pilot state: finished 
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | transexitcode: 0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | exeerrorcode: 0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | exeerrordiag: 
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | exitcode: 0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | exitmsg: OK
[2026-04-19 15:15:54] 2026-04-19 13:14:52,714 | INFO     | cpuconsumptiontime: 96921 s
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | nevents: 400
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | neventsw: 0
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | pid: 21992
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | pgrp: 21992
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | corecount: 8
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | event service: False
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | sizes: {0: 2280943, 1: 2282001, 2: 2283429, 12: 2283457, 25892: 2319557, 25893: 2319556, 25897: 2328738, 25898: 2328794, 25901: 2328988}
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | --------------------------------------------------
[2026-04-19 15:15:54] 2026-04-19 13:14:52,715 | INFO     | 
[2026-04-19 15:15:54] 2026-04-19 13:14:52,716 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-19 15:15:54] 2026-04-19 13:14:53,312 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 15:15:54] 2026-04-19 13:14:53,314 | INFO     | job 7101002076 has completed (purged errors)
[2026-04-19 15:15:54] 2026-04-19 13:14:53,315 | INFO     | overall cleanup function is called
[2026-04-19 15:15:54] 2026-04-19 13:14:53,481 | INFO     | PID=17544 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 15:15:54] 2026-04-19 13:14:53,481 | INFO     | .. there are 2 such processes running
[2026-04-19 15:15:54] 2026-04-19 13:14:54,323 | INFO     | --- collectZombieJob: --- 10, [21992]
[2026-04-19 15:15:54] 2026-04-19 13:14:54,324 | INFO     | zombie collector waiting for pid 21992
[2026-04-19 15:15:54] 2026-04-19 13:14:54,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 15:15:54] 2026-04-19 13:14:54,324 | INFO     | collected zombie processes
[2026-04-19 15:15:54] 2026-04-19 13:14:54,324 | INFO     | will attempt to kill all subprocesses of pid=21992
[2026-04-19 15:15:54] 2026-04-19 13:14:54,413 | INFO     | process IDs to be killed: [21992] (in reverse order)
[2026-04-19 15:15:54] 2026-04-19 13:14:55,427 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 15:15:54] 2026-04-19 13:14:55,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 15:15:54] 2026-04-19 13:14:55,429 | INFO     | did not find any defunct processes belonging to 21992
[2026-04-19 15:15:54] 2026-04-19 13:14:55,431 | INFO     | did not find any defunct processes belonging to 21992
[2026-04-19 15:15:54] 2026-04-19 13:14:55,431 | INFO     | Ready for new job
[2026-04-19 15:15:54] 2026-04-19 13:14:55,434 | INFO     | **************************************
[2026-04-19 15:15:54] 2026-04-19 13:14:55,434 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 15:15:54] 2026-04-19 13:14:55,434 | INFO     | **************************************
[2026-04-19 15:15:54] 2026-04-19 13:14:55,434 | INFO     | 
[2026-04-19 15:15:54] 2026-04-19 13:14:55,435 | INFO     | pilot is running in a VM
[2026-04-19 15:15:54] 2026-04-19 13:14:55,435 | INFO     | architecture information:
[2026-04-19 15:15:54] 2026-04-19 13:14:55,444 | INFO     | executing command: cat /etc/os-release
[2026-04-19 15:15:54] 2026-04-19 13:14:55,703 | INFO     | cat /etc/os-release:
[2026-04-19 15:15:54] NAME="CentOS Linux"
[2026-04-19 15:15:54] VERSION="7 (Core)"
[2026-04-19 15:15:54] ID="centos"
[2026-04-19 15:15:54] ID_LIKE="rhel fedora"
[2026-04-19 15:15:54] VERSION_ID="7"
[2026-04-19 15:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 15:15:54] ANSI_COLOR="0;31"
[2026-04-19 15:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 15:15:54] HOME_URL="https://www.centos.org/"
[2026-04-19 15:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 15:15:54] 
[2026-04-19 15:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 15:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 15:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 15:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 15:15:54] 
[2026-04-19 15:15:54] 2026-04-19 13:14:55,703 | INFO     | **************************************
[2026-04-19 15:15:54] 2026-04-19 13:14:56,207 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-19 15:15:54] 2026-04-19 13:14:56,463 | INFO     | sufficient remaining disk space (487088717824 B)
[2026-04-19 15:15:54] 2026-04-19 13:14:56,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 15:15:54] 2026-04-19 13:14:56,464 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 15:15:54] 2026-04-19 13:14:56,464 | INFO     | update_server=False
[2026-04-19 15:15:54] 2026-04-19 13:14:56,464 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 15:15:54] 2026-04-19 13:14:56,464 | INFO     | all payload control threads have been joined
[2026-04-19 15:15:54] 2026-04-19 13:14:56,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 15:15:54] 2026-04-19 13:14:56,490 | INFO     | all data control threads have been joined
[2026-04-19 15:15:54] 2026-04-19 13:14:56,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 15:15:54] 2026-04-19 13:14:56,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 15:15:54] 2026-04-19 13:14:56,855 | INFO     | aborting loop
[2026-04-19 15:15:54] 2026-04-19 13:14:56,977 | INFO     | all job control threads have been joined
[2026-04-19 15:15:54] 2026-04-19 13:14:57,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 15:15:54] 2026-04-19 13:14:57,470 | INFO     | [payload] control thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,470 | INFO     | [job] retrieve thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,496 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,497 | INFO     | [data] control thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,752 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,790 | INFO     | [job] validate thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,861 | INFO     | [job] job monitor thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:57,984 | INFO     | [job] control thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,015 | INFO     | [data] copytool_in thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,163 | INFO     | [payload] validate_post thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,247 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,399 | INFO     | [job] queue monitor thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,655 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,857 | INFO     | [data] copytool_out thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:14:58,942 | INFO     | [payload] failed_post thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:15:00,474 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 15:15:54] 2026-04-19 13:15:25,565 | INFO     | PID=17544 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 15:15:54] 2026-04-19 13:15:25,565 | INFO     | .. there are 2 such processes running
[2026-04-19 15:15:54] 2026-04-19 13:15:25,566 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 15:15:54] 2026-04-19 13:15:25,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 15:15:54] 2026-04-19 13:15:25,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 15:15:54] 2026-04-19 13:15:43,298 | INFO     | [monitor] cgroup control has ended
[2026-04-19 15:15:54] 2026-04-19 13:15:43,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159796942656)>', '<ExcThread(monitor, started 140159135770368)>']
[2026-04-19 15:15:54] 2026-04-19 13:15:43,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 15:15:54] 2026-04-19 13:15:43,674 | INFO     | [monitor] control thread has ended
[2026-04-19 15:15:54] 2026-04-19 13:15:48,498 | INFO     | all workflow threads have been joined
[2026-04-19 15:15:54] 2026-04-19 13:15:48,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 15:15:54] 2026-04-19 13:15:48,499 | INFO     | traces error code: 0
[2026-04-19 15:15:54] 2026-04-19 13:15:48,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 15:15:54] 2026-04-19 13:15:48,928 [wrapper] ==== pilot stdout END ====
[2026-04-19 15:15:54] 2026-04-19 13:15:49,065 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 15:15:54] 2026-04-19 13:15:49,188 [wrapper] pilotpid: 17544
[2026-04-19 15:15:54] 2026-04-19 13:15:49,326 [wrapper] Pilot exit status: 0
[2026-04-19 15:15:54] 2026-04-19 13:15:49,872 [wrapper] pandaids: 7101002076
[2026-04-19 15:15:54] 2026-04-19 13:15:50,979 [wrapper] cleanup supervisor_pilot 29255 17545
[2026-04-19 15:15:54] 2026-04-19 13:15:50,994 [wrapper] Test setup, not cleaning
[2026-04-19 15:15:54] 2026-04-19 13:15:50,999 [wrapper] apfmon messages muted
[2026-04-19 15:15:54] 2026-04-19 13:15:51,097 [wrapper] ==== wrapper stdout END ====
[2026-04-19 15:15:54] 2026-04-19 13:15:51,217 [wrapper] ==== wrapper stderr END ====
[2026-04-19 15:15:54]  *** Error codes and diagnostics ***
[2026-04-19 15:15:54]     "exeErrorCode": 0,
[2026-04-19 15:15:54]     "pilotErrorCode": 0,
[2026-04-19 15:15:54]  *** Listing of results directory ***
[2026-04-19 15:15:54] total 2465768
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc     644190 Apr 18 13:57 pilot3.tar.gz
[2026-04-19 15:15:54] -rwx------. 1 boinc boinc      36322 Apr 18 13:58 runpilot2-wrapper.sh
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc       5094 Apr 18 14:01 queuedata.json
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc        100 Apr 19 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 15:15:54] -rwxr-xr-x. 1 boinc boinc       7986 Apr 19 07:56 run_atlas
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc        105 Apr 19 07:56 job.xml
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc       6305 Apr 19 07:56 init_data.xml
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc 2239575486 Apr 19 07:56 EVNT.49820242._000002.pool.root.1
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc      15665 Apr 19 07:56 start_atlas.sh
[2026-04-19 15:15:54] drwxrwx--x. 2 boinc boinc         68 Apr 19 07:56 shared
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc     656903 Apr 19 07:56 input.tar.gz
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc          0 Apr 19 07:56 boinc_lockfile
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc       2548 Apr 19 07:56 pandaJob.out
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc        415 Apr 19 08:02 workernode_map.json
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc     997681 Apr 19 08:02 agis_schedconf.cvmfs.json
[2026-04-19 15:15:54] drwx------. 5 boinc boinc       4096 Apr 19 08:02 pilot3
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc  275258402 Apr 19 15:12 HITS.49820244._000338.pool.root.1
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc        489 Apr 19 15:13 boinc_task_state.xml
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc       1023 Apr 19 15:14 memory_monitor_summary.json
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc    1512404 Apr 19 15:14 agis_ddmendpoints.agis.ALL.json
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc         95 Apr 19 15:14 pilot_heartbeat.json
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc     667186 Apr 19 15:14 log.49820244._000338.job.log.tgz.1
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc       6347 Apr 19 15:14 heartbeat_new.json
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc       6238 Apr 19 15:14 heartbeat.json
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc       8192 Apr 19 15:15 boinc_mmap_file
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc         28 Apr 19 15:15 wrapper_checkpoint.txt
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc       4879 Apr 19 15:15 pilotlog.txt
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc    2365772 Apr 19 15:15 log.49820244._000338.job.log.1
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc        357 Apr 19 15:15 output.list
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc        410 Apr 19 15:15 runtime_log
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc    3051520 Apr 19 15:15 result.tar.gz
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc       8438 Apr 19 15:15 runtime_log.err
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc        656 Apr 19 15:15 71f9ab43c58a.diag
[2026-04-19 15:15:54] -rw-r--r--. 1 boinc boinc      20734 Apr 19 15:15 stderr.txt
[2026-04-19 15:15:54] HITS file was successfully produced:
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc 275258402 Apr 19 15:12 shared/HITS.pool.root.1
[2026-04-19 15:15:54]  *** Contents of shared directory: ***
[2026-04-19 15:15:54] total 2459536
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc 2239575486 Apr 19 07:56 ATLAS.root_0
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc      15665 Apr 19 07:56 start_atlas.sh
[2026-04-19 15:15:54] -rw-r--r--. 2 boinc boinc     656903 Apr 19 07:56 input.tar.gz
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc  275258402 Apr 19 15:12 HITS.pool.root.1
[2026-04-19 15:15:54] -rw-------. 1 boinc boinc    3051520 Apr 19 15:15 result.tar.gz
15:15:55 (13570): run_atlas exited; CPU time 97179.771187
15:15:55 (13570): called boinc_finish(0)

</stderr_txt>
]]>

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