Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:09:50 (4453): wrapper (7.7.26015): starting
21:09:50 (4453): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 21:09:50] Arguments: --nthreads 8
[2026-04-18 21:09:50] Threads: 8
[2026-04-18 21:09:50] Checking for CVMFS
[2026-04-18 21:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 21:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 21:09:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 21:09:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 21:09:53] 2.11.2.0 24858 4446 99496 158594 1 186 25035398 25165825 1060 130560 0 1181061 99.673 3691837 20857 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 21:09:53] CVMFS is ok
[2026-04-18 21:09:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 21:09:53] Checking for apptainer binary...
[2026-04-18 21:09:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 21:09:53] Running /usr/bin/apptainer --version
[2026-04-18 21:09:53] apptainer version 1.3.2-1.el7
[2026-04-18 21:09:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 21:10:21] cg-vwn394.simple-grid.lan
[2026-04-18 21:10:21] apptainer works
[2026-04-18 21:10:21] Set ATHENA_PROC_NUMBER=8
[2026-04-18 21:10:21] Set ATHENA_CORE_NUMBER=8
[2026-04-18 21:10:21] Starting ATLAS job with PandaID=7097258309
[2026-04-18 21:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 01:33:50]  *** The last 200 lines of the pilot log: ***
[2026-04-19 01:33:50] 2026-04-18 23:32:56,017 | INFO     | this job has now completed (state=finished)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,017 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,018 | INFO     | log transfer has been attempted: DONE
[2026-04-19 01:33:50] 2026-04-18 23:32:56,018 | INFO     | job 7097258309 has finished - writing final server update
[2026-04-19 01:33:50] 2026-04-18 23:32:56,018 | INFO     | total number of processed events: 400 (read)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,020 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7097258309/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,021 | INFO     | extracted standard info from prmon json
[2026-04-19 01:33:50] 2026-04-18 23:32:56,021 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 01:33:50] 2026-04-18 23:32:56,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 01:33:50] 2026-04-18 23:32:56,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 01:33:50] 2026-04-18 23:32:56,027 | INFO     | fitting pss+swap vs Time
[2026-04-19 01:33:50] 2026-04-18 23:32:56,028 | INFO     | sum of square deviations: 4729621702.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,030 | INFO     | sum of deviations: 87550514739.99997
[2026-04-19 01:33:50] 2026-04-18 23:32:56,030 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,031 | INFO     | mean y: 2468565.4516129033
[2026-04-19 01:33:50] 2026-04-18 23:32:56,031 | INFO     | intersect: 2468565.4516129033
[2026-04-19 01:33:50] 2026-04-18 23:32:56,031 | INFO     | chi2: 9.231690737730284
[2026-04-19 01:33:50] 2026-04-18 23:32:56,032 | INFO     | sum of square deviations: 4449281562.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,038 | INFO     | sum of deviations: 102459217910.00002
[2026-04-19 01:33:50] 2026-04-18 23:32:56,038 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,039 | INFO     | mean y: 2476528.0823045266
[2026-04-19 01:33:50] 2026-04-18 23:32:56,039 | INFO     | intersect: 2476528.0823045266
[2026-04-19 01:33:50] 2026-04-18 23:32:56,039 | INFO     | chi2: 8.549882602454254
[2026-04-19 01:33:50] 2026-04-18 23:32:56,039 | INFO     | current chi2=8.549882602454254 (change=7.385517503196396 %)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,039 | INFO     | right removable region: 242
[2026-04-19 01:33:50] 2026-04-18 23:32:56,040 | INFO     | sum of square deviations: 4449281562.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,042 | INFO     | sum of deviations: -2085867305.999979
[2026-04-19 01:33:50] 2026-04-18 23:32:56,042 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,043 | INFO     | mean y: 2517305.769547325
[2026-04-19 01:33:50] 2026-04-18 23:32:56,043 | INFO     | intersect: 2517305.769547325
[2026-04-19 01:33:50] 2026-04-18 23:32:56,043 | INFO     | chi2: 3.8603612625098953
[2026-04-19 01:33:50] 2026-04-18 23:32:56,043 | INFO     | current chi2=3.8603612625098953 (change=58.18359418462268 %)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,044 | INFO     | sum of square deviations: 4180243959.5
[2026-04-19 01:33:50] 2026-04-18 23:32:56,046 | INFO     | sum of deviations: -67309538019.499985
[2026-04-19 01:33:50] 2026-04-18 23:32:56,046 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,046 | INFO     | mean y: 2554199.256302521
[2026-04-19 01:33:50] 2026-04-18 23:32:56,046 | INFO     | intersect: 2554199.256302521
[2026-04-19 01:33:50] 2026-04-18 23:32:56,047 | INFO     | chi2: 1.1228581064218786
[2026-04-19 01:33:50] 2026-04-18 23:32:56,047 | INFO     | current chi2=1.1228581064218786 (change=70.91313402902016 %)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,047 | INFO     | sum of square deviations: 3922276332.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,049 | INFO     | sum of deviations: -74928211862.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,050 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,050 | INFO     | mean y: 2558642.8154506437
[2026-04-19 01:33:50] 2026-04-18 23:32:56,050 | INFO     | intersect: 2558642.8154506437
[2026-04-19 01:33:50] 2026-04-18 23:32:56,050 | INFO     | chi2: 1.008582625242413
[2026-04-19 01:33:50] 2026-04-18 23:32:56,051 | INFO     | current chi2=1.008582625242413 (change=10.17719696958131 %)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,051 | INFO     | left removable region: 15
[2026-04-19 01:33:50] 2026-04-18 23:32:56,051 | INFO     | sum of square deviations: 3627000098.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,053 | INFO     | sum of deviations: -57425040222.00001
[2026-04-19 01:33:50] 2026-04-18 23:32:56,053 | INFO     | mean x (centered): 0.0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,054 | INFO     | mean y: 2569281.4405286345
[2026-04-19 01:33:50] 2026-04-18 23:32:56,054 | INFO     | intersect: 2569281.4405286345
[2026-04-19 01:33:50] 2026-04-18 23:32:56,054 | INFO     | chi2: 0.21536700406873865
[2026-04-19 01:33:50] 2026-04-18 23:32:56,054 | INFO     | current memory leak: -15.83 B/s (using 227 data points, chi2=0.22)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,055 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,055 | INFO     | ..............................
[2026-04-19 01:33:50] 2026-04-18 23:32:56,055 | INFO     | . Timing measurements:
[2026-04-19 01:33:50] 2026-04-18 23:32:56,055 | INFO     | . get job = 0 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . initial setup = 108 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . payload setup = 169 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . stage-in = 0 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . payload execution = 15209 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . stage-out = 3 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | . log creation = 1 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,056 | INFO     | ..............................
[2026-04-19 01:33:50] 2026-04-18 23:32:56,273 | INFO     | 
[2026-04-19 01:33:50] 2026-04-18 23:32:56,273 | INFO     | job summary report
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | --------------------------------------------------
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | PanDA job id: 7097258309
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | task id: 49545114
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | errors: (none)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | pilot state: finished 
[2026-04-19 01:33:50] 2026-04-18 23:32:56,274 | INFO     | transexitcode: 0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | exeerrorcode: 0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | exeerrordiag: 
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | exitcode: 0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | exitmsg: OK
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | cpuconsumptiontime: 57394 s
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | nevents: 400
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | neventsw: 0
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | pid: 12857
[2026-04-19 01:33:50] 2026-04-18 23:32:56,275 | INFO     | pgrp: 12857
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | corecount: 8
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | event service: False
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | sizes: {0: 2281626, 1: 2282027, 2: 2283455, 12: 2283483, 15383: 2314652, 15388: 2323652, 15389: 2323836, 15391: 2324030}
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | --------------------------------------------------
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | 
[2026-04-19 01:33:50] 2026-04-18 23:32:56,276 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-19 01:33:50] 2026-04-18 23:32:56,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 01:33:50] 2026-04-18 23:32:56,626 | INFO     | job 7097258309 has completed (purged errors)
[2026-04-19 01:33:50] 2026-04-18 23:32:56,627 | INFO     | overall cleanup function is called
[2026-04-19 01:33:50] 2026-04-18 23:32:57,635 | INFO     | --- collectZombieJob: --- 10, [12857]
[2026-04-19 01:33:50] 2026-04-18 23:32:57,635 | INFO     | zombie collector waiting for pid 12857
[2026-04-19 01:33:50] 2026-04-18 23:32:57,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 01:33:50] 2026-04-18 23:32:57,636 | INFO     | collected zombie processes
[2026-04-19 01:33:50] 2026-04-18 23:32:57,636 | INFO     | will attempt to kill all subprocesses of pid=12857
[2026-04-19 01:33:50] 2026-04-18 23:32:57,738 | INFO     | process IDs to be killed: [12857] (in reverse order)
[2026-04-19 01:33:50] 2026-04-18 23:32:58,664 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 01:33:50] 2026-04-18 23:32:58,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 01:33:50] 2026-04-18 23:32:58,666 | INFO     | did not find any defunct processes belonging to 12857
[2026-04-19 01:33:50] 2026-04-18 23:32:58,668 | INFO     | did not find any defunct processes belonging to 12857
[2026-04-19 01:33:50] 2026-04-18 23:32:58,669 | INFO     | Ready for new job
[2026-04-19 01:33:50] 2026-04-18 23:32:58,670 | INFO     | **************************************
[2026-04-19 01:33:50] 2026-04-18 23:32:58,671 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 01:33:50] 2026-04-18 23:32:58,671 | INFO     | **************************************
[2026-04-19 01:33:50] 2026-04-18 23:32:58,671 | INFO     | 
[2026-04-19 01:33:50] 2026-04-18 23:32:58,672 | INFO     | pilot is running in a VM
[2026-04-19 01:33:50] 2026-04-18 23:32:58,672 | INFO     | architecture information:
[2026-04-19 01:33:50] 2026-04-18 23:32:58,672 | INFO     | executing command: cat /etc/os-release
[2026-04-19 01:33:50] 2026-04-18 23:32:58,958 | INFO     | cat /etc/os-release:
[2026-04-19 01:33:50] NAME="CentOS Linux"
[2026-04-19 01:33:50] VERSION="7 (Core)"
[2026-04-19 01:33:50] ID="centos"
[2026-04-19 01:33:50] ID_LIKE="rhel fedora"
[2026-04-19 01:33:50] VERSION_ID="7"
[2026-04-19 01:33:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 01:33:50] ANSI_COLOR="0;31"
[2026-04-19 01:33:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 01:33:50] HOME_URL="https://www.centos.org/"
[2026-04-19 01:33:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 01:33:50] 
[2026-04-19 01:33:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 01:33:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 01:33:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 01:33:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 01:33:50] 
[2026-04-19 01:33:50] 2026-04-18 23:32:58,958 | INFO     | **************************************
[2026-04-19 01:33:50] 2026-04-18 23:32:59,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-19 01:33:50] 2026-04-18 23:32:59,655 | INFO     | sufficient remaining disk space (494507393024 B)
[2026-04-19 01:33:50] 2026-04-18 23:32:59,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 01:33:50] 2026-04-18 23:32:59,655 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 01:33:50] 2026-04-18 23:32:59,656 | INFO     | update_server=False
[2026-04-19 01:33:50] 2026-04-18 23:32:59,656 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 01:33:50] 2026-04-18 23:32:59,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 01:33:50] 2026-04-18 23:32:59,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 01:33:50] 2026-04-18 23:32:59,661 | INFO     | aborting loop
[2026-04-19 01:33:50] 2026-04-18 23:33:00,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 01:33:50] 2026-04-18 23:33:00,122 | INFO     | all payload control threads have been joined
[2026-04-19 01:33:50] 2026-04-18 23:33:00,661 | INFO     | [job] retrieve thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:00,666 | INFO     | [job] job monitor thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:00,670 | INFO     | all data control threads have been joined
[2026-04-19 01:33:50] 2026-04-18 23:33:00,750 | INFO     | [payload] validate_post thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:00,941 | INFO     | all job control threads have been joined
[2026-04-19 01:33:50] 2026-04-18 23:33:01,087 | INFO     | [job] validate thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,095 | INFO     | [payload] failed_post thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,107 | INFO     | [data] copytool_in thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,128 | INFO     | [payload] control thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 01:33:50] 2026-04-18 23:33:01,353 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,619 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,664 | INFO     | [data] copytool_out thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,676 | INFO     | [data] control thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:01,947 | INFO     | [job] control thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:02,083 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:02,293 | INFO     | [job] queue monitor thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:04,073 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 01:33:50] 2026-04-18 23:33:29,075 | INFO     | PID=8424 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-19 01:33:50] 2026-04-18 23:33:29,076 | INFO     | .. there are 2 such processes running
[2026-04-19 01:33:50] 2026-04-18 23:33:29,076 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 01:33:50] 2026-04-18 23:33:29,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 01:33:50] 2026-04-18 23:33:29,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 01:33:50] 2026-04-18 23:33:39,162 | INFO     | [monitor] cgroup control has ended
[2026-04-19 01:33:50] 2026-04-18 23:33:40,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861529814848)>', '<ExcThread(monitor, started 139861080127232)>']
[2026-04-19 01:33:50] 2026-04-18 23:33:40,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 01:33:50] 2026-04-18 23:33:40,141 | INFO     | [monitor] control thread has ended
[2026-04-19 01:33:50] 2026-04-18 23:33:45,098 | INFO     | all workflow threads have been joined
[2026-04-19 01:33:50] 2026-04-18 23:33:45,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 01:33:50] 2026-04-18 23:33:45,099 | INFO     | traces error code: 0
[2026-04-19 01:33:50] 2026-04-18 23:33:45,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 01:33:50] 2026-04-18 23:33:45,518 [wrapper] ==== pilot stdout END ====
[2026-04-19 01:33:50] 2026-04-18 23:33:45,588 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 01:33:50] 2026-04-18 23:33:45,697 [wrapper] pilotpid: 8424
[2026-04-19 01:33:50] 2026-04-18 23:33:45,750 [wrapper] Pilot exit status: 0
[2026-04-19 01:33:50] 2026-04-18 23:33:46,214 [wrapper] pandaids: 7097258309
[2026-04-19 01:33:50] 2026-04-18 23:33:47,193 [wrapper] cleanup supervisor_pilot 19132 8425
[2026-04-19 01:33:50] 2026-04-18 23:33:47,293 [wrapper] Test setup, not cleaning
[2026-04-19 01:33:50] 2026-04-18 23:33:47,390 [wrapper] apfmon messages muted
[2026-04-19 01:33:50] 2026-04-18 23:33:47,478 [wrapper] ==== wrapper stdout END ====
[2026-04-19 01:33:50] 2026-04-18 23:33:47,570 [wrapper] ==== wrapper stderr END ====
[2026-04-19 01:33:50]  *** Error codes and diagnostics ***
[2026-04-19 01:33:50]     "exeErrorCode": 0,
[2026-04-19 01:33:50]     "pilotErrorCode": 0,
[2026-04-19 01:33:50]  *** Listing of results directory ***
[2026-04-19 01:33:50] total 461944
[2026-04-19 01:33:50] -rwx------. 1 boinc boinc     36322 Apr 18 09:42 runpilot2-wrapper.sh
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc    644190 Apr 18 10:01 pilot3.tar.gz
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc      5094 Apr 18 10:02 queuedata.json
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc       100 Apr 18 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 01:33:50] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 21:09 run_atlas
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc       105 Apr 18 21:09 job.xml
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc      6307 Apr 18 21:09 init_data.xml
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc 279558320 Apr 18 21:09 EVNT.49539591._000393.pool.root.1
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc     15665 Apr 18 21:09 start_atlas.sh
[2026-04-19 01:33:50] drwxrwx--x. 2 boinc boinc        68 Apr 18 21:09 shared
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc    656944 Apr 18 21:09 input.tar.gz
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc         0 Apr 18 21:09 boinc_lockfile
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc      2603 Apr 18 21:10 pandaJob.out
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc       415 Apr 18 21:16 workernode_map.json
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc    997676 Apr 18 21:16 agis_schedconf.cvmfs.json
[2026-04-19 01:33:50] drwx------. 5 boinc boinc      4096 Apr 18 21:16 pilot3
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc 185782715 Apr 19 01:31 HITS.49545114._025581.pool.root.1
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc       488 Apr 19 01:31 boinc_task_state.xml
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc        95 Apr 19 01:32 pilot_heartbeat.json
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc      1012 Apr 19 01:32 memory_monitor_summary.json
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc   1512404 Apr 19 01:32 agis_ddmendpoints.agis.ALL.json
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc    400534 Apr 19 01:32 log.49545114._025581.job.log.tgz.1
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc      6334 Apr 19 01:32 heartbeat_new.json
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc      6225 Apr 19 01:32 heartbeat.json
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc      8192 Apr 19 01:33 boinc_mmap_file
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc        28 Apr 19 01:33 wrapper_checkpoint.txt
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc      4879 Apr 19 01:33 pilotlog.txt
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc   1420904 Apr 19 01:33 log.49545114._025581.job.log.1
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc       357 Apr 19 01:33 output.list
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc       410 Apr 19 01:33 runtime_log
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc   1843200 Apr 19 01:33 result.tar.gz
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc      8454 Apr 19 01:33 runtime_log.err
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc       656 Apr 19 01:33 35dc3ab3de20.diag
[2026-04-19 01:33:50] -rw-r--r--. 1 boinc boinc     20644 Apr 19 01:33 stderr.txt
[2026-04-19 01:33:50] HITS file was successfully produced:
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc 185782715 Apr 19 01:31 shared/HITS.pool.root.1
[2026-04-19 01:33:50]  *** Contents of shared directory: ***
[2026-04-19 01:33:50] total 456900
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc 279558320 Apr 18 21:09 ATLAS.root_0
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc     15665 Apr 18 21:09 start_atlas.sh
[2026-04-19 01:33:50] -rw-r--r--. 2 boinc boinc    656944 Apr 18 21:09 input.tar.gz
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc 185782715 Apr 19 01:31 HITS.pool.root.1
[2026-04-19 01:33:50] -rw-------. 1 boinc boinc   1843200 Apr 19 01:33 result.tar.gz
01:33:52 (4453): run_atlas exited; CPU time 57558.769950
01:33:52 (4453): called boinc_finish(0)

</stderr_txt>
]]>

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