Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:08 (19942): wrapper (7.7.26015): starting
00:10:08 (19942): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 00:10:08] Arguments: --nthreads 8
[2026-04-19 00:10:08] Threads: 8
[2026-04-19 00:10:08] Checking for CVMFS
[2026-04-19 00:10:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 00:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 00:10:10] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 00:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 00:10:11] 2.11.2.0 14438 4611 96680 158599 3 9 22981540 25165824 1060 130560 0 1066955 99.869 3393255 20955 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 00:10:11] CVMFS is ok
[2026-04-19 00:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 00:10:11] Checking for apptainer binary...
[2026-04-19 00:10:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 00:10:12] Running /usr/bin/apptainer --version
[2026-04-19 00:10:12] apptainer version 1.3.2-1.el7
[2026-04-19 00:10:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 00:10:20] cg-vwn439.simple-grid.lan
[2026-04-19 00:10:20] apptainer works
[2026-04-19 00:10:20] Set ATHENA_PROC_NUMBER=8
[2026-04-19 00:10:20] Set ATHENA_CORE_NUMBER=8
[2026-04-19 00:10:20] Starting ATLAS job with PandaID=7100304854
[2026-04-19 00:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 04:35:58]  *** The last 200 lines of the pilot log: ***
[2026-04-19 04:35:58] 2026-04-19 02:34:46,825 | INFO     | this job has now completed (state=finished)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,825 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,825 | INFO     | log transfer has been attempted: DONE
[2026-04-19 04:35:58] 2026-04-19 02:34:46,825 | INFO     | job 7100304854 has finished - writing final server update
[2026-04-19 04:35:58] 2026-04-19 02:34:46,826 | INFO     | total number of processed events: 400 (read)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,828 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7100304854/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,828 | INFO     | extracted standard info from prmon json
[2026-04-19 04:35:58] 2026-04-19 02:34:46,829 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 04:35:58] 2026-04-19 02:34:46,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 04:35:58] 2026-04-19 02:34:46,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 04:35:58] 2026-04-19 02:34:46,834 | INFO     | fitting pss+swap vs Time
[2026-04-19 04:35:58] 2026-04-19 02:34:46,835 | INFO     | sum of square deviations: 4787066500.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,837 | INFO     | sum of deviations: 98534607778.99995
[2026-04-19 04:35:58] 2026-04-19 02:34:46,837 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,837 | INFO     | mean y: 2460248.3855421687
[2026-04-19 04:35:58] 2026-04-19 02:34:46,838 | INFO     | intersect: 2460248.3855421687
[2026-04-19 04:35:58] 2026-04-19 02:34:46,838 | INFO     | chi2: 9.406821651113052
[2026-04-19 04:35:58] 2026-04-19 02:34:46,839 | INFO     | sum of square deviations: 4504437945.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,841 | INFO     | sum of deviations: 112911374265.5
[2026-04-19 04:35:58] 2026-04-19 02:34:46,841 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,841 | INFO     | mean y: 2467859.8155737706
[2026-04-19 04:35:58] 2026-04-19 02:34:46,841 | INFO     | intersect: 2467859.8155737706
[2026-04-19 04:35:58] 2026-04-19 02:34:46,842 | INFO     | chi2: 8.725375250623868
[2026-04-19 04:35:58] 2026-04-19 02:34:46,842 | INFO     | current chi2=8.725375250623868 (change=7.244172641548412 %)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,842 | INFO     | right removable region: 243
[2026-04-19 04:35:58] 2026-04-19 02:34:46,842 | INFO     | sum of square deviations: 4504437945.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,848 | INFO     | sum of deviations: 7978036890.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,848 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,848 | INFO     | mean y: 2509094.368852459
[2026-04-19 04:35:58] 2026-04-19 02:34:46,848 | INFO     | intersect: 2509094.368852459
[2026-04-19 04:35:58] 2026-04-19 02:34:46,849 | INFO     | chi2: 3.9308667337621417
[2026-04-19 04:35:58] 2026-04-19 02:34:46,849 | INFO     | current chi2=3.9308667337621417 (change=58.2125942262653 %)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,849 | INFO     | sum of square deviations: 4233158440.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,852 | INFO     | sum of deviations: -58827949881.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,852 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,852 | INFO     | mean y: 2546602.1924686194
[2026-04-19 04:35:58] 2026-04-19 02:34:46,852 | INFO     | intersect: 2546602.1924686194
[2026-04-19 04:35:58] 2026-04-19 02:34:46,852 | INFO     | chi2: 1.142065316307363
[2026-04-19 04:35:58] 2026-04-19 02:34:46,853 | INFO     | current chi2=1.142065316307363 (change=70.94622144021864 %)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,853 | INFO     | sum of square deviations: 3972995422.5
[2026-04-19 04:35:58] 2026-04-19 02:34:46,855 | INFO     | sum of deviations: -68337074906.50001
[2026-04-19 04:35:58] 2026-04-19 02:34:46,855 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,856 | INFO     | mean y: 2552114.363247863
[2026-04-19 04:35:58] 2026-04-19 02:34:46,856 | INFO     | intersect: 2552114.363247863
[2026-04-19 04:35:58] 2026-04-19 02:34:46,856 | INFO     | chi2: 1.0057760593021332
[2026-04-19 04:35:58] 2026-04-19 02:34:46,856 | INFO     | current chi2=1.0057760593021332 (change=11.933578146466576 %)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,857 | INFO     | left removable region: 15
[2026-04-19 04:35:58] 2026-04-19 02:34:46,857 | INFO     | sum of square deviations: 3675146117.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,859 | INFO     | sum of deviations: -51328561660.5
[2026-04-19 04:35:58] 2026-04-19 02:34:46,859 | INFO     | mean x (centered): 0.0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,859 | INFO     | mean y: 2562357.75
[2026-04-19 04:35:58] 2026-04-19 02:34:46,859 | INFO     | intersect: 2562357.75
[2026-04-19 04:35:58] 2026-04-19 02:34:46,860 | INFO     | chi2: 0.21110589524475767
[2026-04-19 04:35:58] 2026-04-19 02:34:46,860 | INFO     | current memory leak: -13.97 B/s (using 228 data points, chi2=0.21)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | ..............................
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | . Timing measurements:
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | . get job = 0 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | . initial setup = 119 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | . payload setup = 212 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,861 | INFO     | . stage-in = 0 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,862 | INFO     | . payload execution = 15265 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,862 | INFO     | . stage-out = 3 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,862 | INFO     | . log creation = 1 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,862 | INFO     | ..............................
[2026-04-19 04:35:58] 2026-04-19 02:34:46,987 | INFO     | 
[2026-04-19 04:35:58] 2026-04-19 02:34:46,987 | INFO     | job summary report
[2026-04-19 04:35:58] 2026-04-19 02:34:46,987 | INFO     | --------------------------------------------------
[2026-04-19 04:35:58] 2026-04-19 02:34:46,987 | INFO     | PanDA job id: 7100304854
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | task id: 49545114
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | errors: (none)
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | pilot state: finished 
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | transexitcode: 0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | exeerrorcode: 0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | exeerrordiag: 
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | exitcode: 0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,988 | INFO     | exitmsg: OK
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | cpuconsumptiontime: 57130 s
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | nevents: 400
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | neventsw: 0
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | pid: 28371
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | pgrp: 28371
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | corecount: 8
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | event service: False
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | sizes: {0: 2281023, 1: 2281708, 2: 2283537, 13: 2283537, 15482: 2314735, 15487: 2323733, 15489: 2323917, 15492: 2324111}
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | --------------------------------------------------
[2026-04-19 04:35:58] 2026-04-19 02:34:46,989 | INFO     | 
[2026-04-19 04:35:58] 2026-04-19 02:34:46,990 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | job 7100304854 has completed (purged errors)
[2026-04-19 04:35:58] 2026-04-19 02:34:47,430 | INFO     | overall cleanup function is called
[2026-04-19 04:35:58] 2026-04-19 02:34:48,439 | INFO     | --- collectZombieJob: --- 10, [28371]
[2026-04-19 04:35:58] 2026-04-19 02:34:48,439 | INFO     | zombie collector waiting for pid 28371
[2026-04-19 04:35:58] 2026-04-19 02:34:48,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 04:35:58] 2026-04-19 02:34:48,440 | INFO     | collected zombie processes
[2026-04-19 04:35:58] 2026-04-19 02:34:48,440 | INFO     | will attempt to kill all subprocesses of pid=28371
[2026-04-19 04:35:58] 2026-04-19 02:34:48,528 | INFO     | process IDs to be killed: [28371] (in reverse order)
[2026-04-19 04:35:58] 2026-04-19 02:34:49,474 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 04:35:58] 2026-04-19 02:34:49,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 04:35:58] 2026-04-19 02:34:49,476 | INFO     | did not find any defunct processes belonging to 28371
[2026-04-19 04:35:58] 2026-04-19 02:34:49,478 | INFO     | did not find any defunct processes belonging to 28371
[2026-04-19 04:35:58] 2026-04-19 02:34:49,478 | INFO     | Ready for new job
[2026-04-19 04:35:58] 2026-04-19 02:34:49,480 | INFO     | **************************************
[2026-04-19 04:35:58] 2026-04-19 02:34:49,480 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 04:35:58] 2026-04-19 02:34:49,481 | INFO     | **************************************
[2026-04-19 04:35:58] 2026-04-19 02:34:49,481 | INFO     | 
[2026-04-19 04:35:58] 2026-04-19 02:34:49,481 | INFO     | pilot is running in a VM
[2026-04-19 04:35:58] 2026-04-19 02:34:49,481 | INFO     | architecture information:
[2026-04-19 04:35:58] 2026-04-19 02:34:49,488 | INFO     | executing command: cat /etc/os-release
[2026-04-19 04:35:58] 2026-04-19 02:34:49,711 | INFO     | cat /etc/os-release:
[2026-04-19 04:35:58] NAME="CentOS Linux"
[2026-04-19 04:35:58] VERSION="7 (Core)"
[2026-04-19 04:35:58] ID="centos"
[2026-04-19 04:35:58] ID_LIKE="rhel fedora"
[2026-04-19 04:35:58] VERSION_ID="7"
[2026-04-19 04:35:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 04:35:58] ANSI_COLOR="0;31"
[2026-04-19 04:35:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 04:35:58] HOME_URL="https://www.centos.org/"
[2026-04-19 04:35:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 04:35:58] 
[2026-04-19 04:35:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 04:35:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 04:35:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 04:35:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 04:35:58] 
[2026-04-19 04:35:58] 2026-04-19 02:34:49,712 | INFO     | **************************************
[2026-04-19 04:35:58] 2026-04-19 02:34:50,215 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-19 04:35:58] 2026-04-19 02:34:50,448 | INFO     | sufficient remaining disk space (495785607168 B)
[2026-04-19 04:35:58] 2026-04-19 02:34:50,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 04:35:58] 2026-04-19 02:34:50,449 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 04:35:58] 2026-04-19 02:34:50,449 | INFO     | update_server=False
[2026-04-19 04:35:58] 2026-04-19 02:34:50,449 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 04:35:58] 2026-04-19 02:34:50,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 04:35:58] 2026-04-19 02:34:50,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 04:35:58] 2026-04-19 02:34:50,521 | INFO     | all data control threads have been joined
[2026-04-19 04:35:58] 2026-04-19 02:34:50,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 04:35:58] 2026-04-19 02:34:50,666 | INFO     | aborting loop
[2026-04-19 04:35:58] 2026-04-19 02:34:50,729 | INFO     | all job control threads have been joined
[2026-04-19 04:35:58] 2026-04-19 02:34:50,729 | INFO     | all payload control threads have been joined
[2026-04-19 04:35:58] 2026-04-19 02:34:51,458 | INFO     | [job] retrieve thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,527 | INFO     | [data] control thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,541 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,624 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,672 | INFO     | [job] job monitor thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,692 | INFO     | [job] validate thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,735 | INFO     | [payload] control thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,736 | INFO     | [job] control thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:51,831 | INFO     | [data] copytool_in thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:52,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 04:35:58] 2026-04-19 02:34:52,340 | INFO     | [payload] validate_post thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:52,461 | INFO     | [data] copytool_out thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:52,568 | INFO     | [payload] failed_post thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:52,771 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:52,901 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:53,009 | INFO     | [job] queue monitor thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:34:54,459 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 04:35:58] 2026-04-19 02:35:18,711 | INFO     | PID=23912 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 04:35:58] 2026-04-19 02:35:18,712 | INFO     | .. there are 2 such processes running
[2026-04-19 04:35:58] 2026-04-19 02:35:18,712 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 04:35:58] 2026-04-19 02:35:18,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 04:35:58] 2026-04-19 02:35:18,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 04:35:58] 2026-04-19 02:35:47,549 | INFO     | [monitor] cgroup control has ended
[2026-04-19 04:35:58] 2026-04-19 02:35:47,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223217469248)>', '<ExcThread(monitor, started 140222494930688)>']
[2026-04-19 04:35:58] 2026-04-19 02:35:47,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 04:35:58] 2026-04-19 02:35:47,886 | INFO     | [monitor] control thread has ended
[2026-04-19 04:35:58] 2026-04-19 02:35:52,622 | INFO     | all workflow threads have been joined
[2026-04-19 04:35:58] 2026-04-19 02:35:52,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 04:35:58] 2026-04-19 02:35:52,623 | INFO     | traces error code: 0
[2026-04-19 04:35:58] 2026-04-19 02:35:52,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 04:35:58] 2026-04-19 02:35:53,093 [wrapper] ==== pilot stdout END ====
[2026-04-19 04:35:58] 2026-04-19 02:35:53,189 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 04:35:58] 2026-04-19 02:35:53,289 [wrapper] pilotpid: 23912
[2026-04-19 04:35:58] 2026-04-19 02:35:53,394 [wrapper] Pilot exit status: 0
[2026-04-19 04:35:58] 2026-04-19 02:35:53,922 [wrapper] pandaids: 7100304854
[2026-04-19 04:35:58] 2026-04-19 02:35:55,007 [wrapper] cleanup supervisor_pilot  2226 23913
[2026-04-19 04:35:58] 2026-04-19 02:35:55,130 [wrapper] Test setup, not cleaning
[2026-04-19 04:35:58] 2026-04-19 02:35:55,251 [wrapper] apfmon messages muted
[2026-04-19 04:35:58] 2026-04-19 02:35:55,323 [wrapper] ==== wrapper stdout END ====
[2026-04-19 04:35:58] 2026-04-19 02:35:55,394 [wrapper] ==== wrapper stderr END ====
[2026-04-19 04:35:58]  *** Error codes and diagnostics ***
[2026-04-19 04:35:58]     "exeErrorCode": 0,
[2026-04-19 04:35:58]     "pilotErrorCode": 0,
[2026-04-19 04:35:58]  *** Listing of results directory ***
[2026-04-19 04:35:58] total 457912
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc    644190 Apr 18 12:46 pilot3.tar.gz
[2026-04-19 04:35:58] -rwx------. 1 boinc boinc     36322 Apr 18 12:47 runpilot2-wrapper.sh
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc      5094 Apr 18 12:52 queuedata.json
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc       100 Apr 19 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 04:35:58] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 00:10 run_atlas
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc       105 Apr 19 00:10 job.xml
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc      6306 Apr 19 00:10 init_data.xml
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc 280355808 Apr 19 00:10 EVNT.49539591._000765.pool.root.1
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc     15665 Apr 19 00:10 start_atlas.sh
[2026-04-19 04:35:58] drwxrwx--x. 2 boinc boinc        68 Apr 19 00:10 shared
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc    656935 Apr 19 00:10 input.tar.gz
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc         0 Apr 19 00:10 boinc_lockfile
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc      2606 Apr 19 00:10 pandaJob.out
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc       415 Apr 19 00:16 workernode_map.json
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc    997676 Apr 19 00:16 agis_schedconf.cvmfs.json
[2026-04-19 04:35:58] drwx------. 5 boinc boinc      4096 Apr 19 00:16 pilot3
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc 180834108 Apr 19 04:33 HITS.49545114._032790.pool.root.1
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc       489 Apr 19 04:33 boinc_task_state.xml
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc      1013 Apr 19 04:34 memory_monitor_summary.json
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc   1512404 Apr 19 04:34 agis_ddmendpoints.agis.ALL.json
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc    403298 Apr 19 04:34 log.49545114._032790.job.log.tgz.1
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc        95 Apr 19 04:34 pilot_heartbeat.json
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc      6332 Apr 19 04:34 heartbeat_new.json
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc      6223 Apr 19 04:34 heartbeat.json
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc      8192 Apr 19 04:35 boinc_mmap_file
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc        28 Apr 19 04:35 wrapper_checkpoint.txt
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc      4879 Apr 19 04:35 pilotlog.txt
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc   1427507 Apr 19 04:35 log.49545114._032790.job.log.1
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc       357 Apr 19 04:35 output.list
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc       410 Apr 19 04:35 runtime_log
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc   1853440 Apr 19 04:35 result.tar.gz
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc      8438 Apr 19 04:35 runtime_log.err
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc       656 Apr 19 04:35 6155f79690a1.diag
[2026-04-19 04:35:58] -rw-r--r--. 1 boinc boinc     20611 Apr 19 04:35 stderr.txt
[2026-04-19 04:35:58] HITS file was successfully produced:
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc 180834108 Apr 19 04:33 shared/HITS.pool.root.1
[2026-04-19 04:35:58]  *** Contents of shared directory: ***
[2026-04-19 04:35:58] total 452856
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc 280355808 Apr 19 00:10 ATLAS.root_0
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc     15665 Apr 19 00:10 start_atlas.sh
[2026-04-19 04:35:58] -rw-r--r--. 2 boinc boinc    656935 Apr 19 00:10 input.tar.gz
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc 180834108 Apr 19 04:33 HITS.pool.root.1
[2026-04-19 04:35:58] -rw-------. 1 boinc boinc   1853440 Apr 19 04:35 result.tar.gz
04:36:00 (19942): run_atlas exited; CPU time 57297.785948
04:36:00 (19942): called boinc_finish(0)

</stderr_txt>
]]>

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