Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:09:14 (942671): wrapper (7.7.26015): starting
23:09:14 (942671): wrapper: running run_atlas (--nthreads 4)
[2026-04-18 23:09:14] Arguments: --nthreads 4
[2026-04-18 23:09:14] Threads: 4
[2026-04-18 23:09:14] Checking for CVMFS
[2026-04-18 23:09:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 23:09:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 23:09:15] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 23:09:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 23:09:15] 2.9.2.0 745507 1037 81320 158596 0 50 34165110 36864001 0 130560 0 767039 99.988 42808 11283 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-18 23:09:15] CVMFS is ok
[2026-04-18 23:09:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 23:09:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 23:09:15] Further information can be found at the LHC@home message board.
[2026-04-18 23:09:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 23:09:15] Checking for apptainer binary...
[2026-04-18 23:09:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 23:09:15] Running /usr/bin/apptainer --version
[2026-04-18 23:09:15] apptainer version 1.4.1-1.1
[2026-04-18 23:09:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 23:09:15] cosA131
[2026-04-18 23:09:15] apptainer works
[2026-04-18 23:09:15] Set ATHENA_PROC_NUMBER=4
[2026-04-18 23:09:15] Set ATHENA_CORE_NUMBER=4
[2026-04-18 23:09:15] Starting ATLAS job with PandaID=7088332771
[2026-04-18 23:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 00:24:45]  *** The last 200 lines of the pilot log: ***
[2026-04-19 00:24:45] 2026-04-18 22:24:14,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 00:24:45] 2026-04-18 22:24:14,395 | INFO     | did not find any defunct processes belonging to 951297
[2026-04-19 00:24:45] 2026-04-18 22:24:14,396 | INFO     | did not find any defunct processes belonging to 951297
[2026-04-19 00:24:45] 2026-04-18 22:24:14,396 | INFO     | Ready for new job
[2026-04-19 00:24:45] 2026-04-18 22:24:14,397 | INFO     | **************************************
[2026-04-19 00:24:45] 2026-04-18 22:24:14,397 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 00:24:45] 2026-04-18 22:24:14,397 | INFO     | **************************************
[2026-04-19 00:24:45] 2026-04-18 22:24:14,397 | INFO     | 
[2026-04-19 00:24:45] 2026-04-18 22:24:14,398 | INFO     | architecture information:
[2026-04-19 00:24:45] 2026-04-18 22:24:14,398 | INFO     | executing command: cat /etc/os-release
[2026-04-19 00:24:45] 2026-04-18 22:24:14,413 | INFO     | cat /etc/os-release:
[2026-04-19 00:24:45] NAME="CentOS Linux"
[2026-04-19 00:24:45] VERSION="7 (Core)"
[2026-04-19 00:24:45] ID="centos"
[2026-04-19 00:24:45] ID_LIKE="rhel fedora"
[2026-04-19 00:24:45] VERSION_ID="7"
[2026-04-19 00:24:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 00:24:45] ANSI_COLOR="0;31"
[2026-04-19 00:24:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 00:24:45] HOME_URL="https://www.centos.org/"
[2026-04-19 00:24:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 00:24:45] 
[2026-04-19 00:24:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 00:24:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 00:24:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 00:24:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 00:24:45] 
[2026-04-19 00:24:45] 2026-04-18 22:24:14,413 | INFO     | **************************************
[2026-04-19 00:24:45] 2026-04-18 22:24:14,916 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | INFO     | sufficient remaining disk space (317804511232 B)
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | INFO     | update_server=False
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 00:24:45] 2026-04-18 22:24:14,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 00:24:45] 2026-04-18 22:24:15,417 | INFO     | job.realtimelogging is not enabled
[2026-04-19 00:24:45] 2026-04-18 22:24:15,459 | INFO     | all job control threads have been joined
[2026-04-19 00:24:45] 2026-04-18 22:24:15,541 | INFO     | all payload control threads have been joined
[2026-04-19 00:24:45] 2026-04-18 22:24:15,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 00:24:45] 2026-04-18 22:24:15,643 | INFO     | aborting loop
[2026-04-19 00:24:45] 2026-04-18 22:24:15,742 | INFO     | all data control threads have been joined
[2026-04-19 00:24:45] 2026-04-18 22:24:15,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 00:24:45] 2026-04-18 22:24:15,941 | INFO     | [job] retrieve thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:15,941 | INFO     | [job] queue monitor thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,282 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,465 | INFO     | [job] control thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,547 | INFO     | [payload] control thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,649 | INFO     | [job] job monitor thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,721 | INFO     | [payload] validate_post thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,748 | INFO     | [data] control thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:16,856 | INFO     | [payload] failed_post thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:17,013 | INFO     | [job] validate thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:17,133 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:17,221 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:17,382 | INFO     | [data] copytool_in thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:17,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 00:24:45] 2026-04-18 22:24:17,810 | INFO     | [data] copytool_out thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:21,482 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 00:24:45] 2026-04-18 22:24:23,747 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-04-19 00:24:45] 2026-04-18 22:24:33,586 | INFO     | [monitor] cgroup control has ended
[2026-04-19 00:24:45] 2026-04-18 22:24:34,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510811793216)>', '<ExcThread(monitor, started 140510022842112)>']
[2026-04-19 00:24:45] 2026-04-18 22:24:39,610 | INFO     | all workflow threads have been joined
[2026-04-19 00:24:45] 2026-04-18 22:24:39,611 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 00:24:45] 2026-04-18 22:24:39,611 | INFO     | traces error code: 0
[2026-04-19 00:24:45] 2026-04-18 22:24:39,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | INFO     | PID=946782 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 00:24:45] 2026-04-18 22:24:45,616 | INFO     | [monitor] control thread has ended
[2026-04-19 00:24:45] 2026-04-18 22:24:45,692 [wrapper] ==== pilot stdout END ====
[2026-04-19 00:24:45] 2026-04-18 22:24:45,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 00:24:45] 2026-04-18 22:24:45,701 [wrapper] pilotpid: 946782
[2026-04-19 00:24:45] 2026-04-18 22:24:45,705 [wrapper] Pilot exit status: 0
[2026-04-19 00:24:45] 2026-04-18 22:24:45,717 [wrapper] pandaids: 7088332771
[2026-04-19 00:24:45] 2026-04-18 22:24:45,738 [wrapper] cleanup supervisor_pilot  956793 946783
[2026-04-19 00:24:45] 2026-04-18 22:24:45,742 [wrapper] Test setup, not cleaning
[2026-04-19 00:24:45] 2026-04-18 22:24:45,746 [wrapper] apfmon messages muted
[2026-04-19 00:24:45] 2026-04-18 22:24:45,750 [wrapper] ==== wrapper stdout END ====
[2026-04-19 00:24:45] 2026-04-18 22:24:45,754 [wrapper] ==== wrapper stderr END ====
[2026-04-19 00:24:45]  *** Error codes and diagnostics ***
[2026-04-19 00:24:45]     "exeErrorCode": 0,
[2026-04-19 00:24:45]     "pilotErrorCode": 0,
[2026-04-19 00:24:45]  *** Listing of results directory ***
[2026-04-19 00:24:45] total 419296
[2026-04-19 00:24:45] -rwx------ 1 boinc boinc     36322 Apr 18 11:53 runpilot2-wrapper.sh
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc    644190 Apr 18 12:05 pilot3.tar.gz
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      5094 Apr 18 12:05 queuedata.json
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc       100 Apr 18 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 00:24:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 23:09 run_atlas
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc       105 Apr 18 23:09 job.xml
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc 223614394 Apr 18 23:09 EVNT.49263198._001412.pool.root.1
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc    656928 Apr 18 23:09 input.tar.gz
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc     15665 Apr 18 23:09 start_atlas.sh
[2026-04-19 00:24:45] drwxrwx--x 2 boinc boinc      4096 Apr 18 23:09 shared
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc         0 Apr 18 23:09 boinc_setup_complete
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      6293 Apr 18 23:09 init_data.xml
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc         0 Apr 18 23:09 boinc_lockfile
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      2576 Apr 18 23:09 pandaJob.out
[2026-04-19 00:24:45] -rw------- 1 boinc boinc    997684 Apr 18 23:09 agis_schedconf.cvmfs.json
[2026-04-19 00:24:45] -rw------- 1 boinc boinc   1512404 Apr 18 23:09 agis_ddmendpoints.agis.ALL.json
[2026-04-19 00:24:45] -rw------- 1 boinc boinc       421 Apr 18 23:09 workernode_map.json
[2026-04-19 00:24:45] drwx------ 5 boinc boinc      4096 Apr 18 23:09 pilot3
[2026-04-19 00:24:45] -rw------- 1 boinc boinc        95 Apr 19 00:23 pilot_heartbeat.json
[2026-04-19 00:24:45] -rw------- 1 boinc boinc 200320892 Apr 19 00:23 HITS.49263200._053385.pool.root.1
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc       487 Apr 19 00:23 boinc_task_state.xml
[2026-04-19 00:24:45] -rw------- 1 boinc boinc      1017 Apr 19 00:24 memory_monitor_summary.json
[2026-04-19 00:24:45] -rw------- 1 boinc boinc    243075 Apr 19 00:24 log.49263200._053385.job.log.tgz.1
[2026-04-19 00:24:45] -rw------- 1 boinc boinc      6321 Apr 19 00:24 heartbeat_new.json
[2026-04-19 00:24:45] -rw------- 1 boinc boinc      6212 Apr 19 00:24 heartbeat.json
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      8192 Apr 19 00:24 boinc_mmap_file
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc        27 Apr 19 00:24 wrapper_checkpoint.txt
[2026-04-19 00:24:45] -rw------- 1 boinc boinc       746 Apr 19 00:24 pilotlog.txt
[2026-04-19 00:24:45] -rw------- 1 boinc boinc    442694 Apr 19 00:24 log.49263200._053385.job.log.1
[2026-04-19 00:24:45] -rw------- 1 boinc boinc       357 Apr 19 00:24 output.list
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc       410 Apr 19 00:24 runtime_log
[2026-04-19 00:24:45] -rw------- 1 boinc boinc    706560 Apr 19 00:24 result.tar.gz
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      8523 Apr 19 00:24 runtime_log.err
[2026-04-19 00:24:45] -rw------- 1 boinc boinc       658 Apr 19 00:24 549ff4e0ed7b.diag
[2026-04-19 00:24:45] -rw-r--r-- 1 boinc boinc      9828 Apr 19 00:24 stderr.txt
[2026-04-19 00:24:45] HITS file was successfully produced:
[2026-04-19 00:24:45] -rw------- 1 boinc boinc 200320892 Apr 19 00:23 shared/HITS.pool.root.1
[2026-04-19 00:24:45]  *** Contents of shared directory: ***
[2026-04-19 00:24:45] total 415364
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc 223614394 Apr 18 23:09 ATLAS.root_0
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc    656928 Apr 18 23:09 input.tar.gz
[2026-04-19 00:24:45] -rw-r--r-- 2 boinc boinc     15665 Apr 18 23:09 start_atlas.sh
[2026-04-19 00:24:45] -rw------- 1 boinc boinc 200320892 Apr 19 00:23 HITS.pool.root.1
[2026-04-19 00:24:45] -rw------- 1 boinc boinc    706560 Apr 19 00:24 result.tar.gz
00:24:46 (942671): run_atlas exited; CPU time 16403.880631
00:24:46 (942671): called boinc_finish(0)

</stderr_txt>
]]>

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