Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:05 (2869291): wrapper (7.7.26015): starting
00:19:05 (2869291): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 00:19:05] Arguments: --nthreads 4
[2026-04-21 00:19:05] Threads: 4
[2026-04-21 00:19:05] Checking for CVMFS
[2026-04-21 00:19:05] No cvmfs_config command found, will try listing directly
[2026-04-21 00:19:05] CVMFS is ok
[2026-04-21 00:19:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 00:19:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 00:19:05] Further information can be found at the LHC@home message board.
[2026-04-21 00:19:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 00:19:05] Checking for apptainer binary...
[2026-04-21 00:19:05] which: no apptainer in ((null))
[2026-04-21 00:19:05] apptainer is not installed, using version from CVMFS
[2026-04-21 00:19:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 00:19:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-21 00:19:06] apptainer works
[2026-04-21 00:19:06] Set ATHENA_PROC_NUMBER=4
[2026-04-21 00:19:06] Set ATHENA_CORE_NUMBER=4
[2026-04-21 00:19:06] Starting ATLAS job with PandaID=7089567531
[2026-04-21 00:19:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 03:26:52]  *** The last 200 lines of the pilot log: ***
[2026-04-21 03:26:53] 2026-04-21 01:26:13,265 | INFO     | job 7089567531 has finished - writing final server update
[2026-04-21 03:26:53] 2026-04-21 01:26:13,266 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_10029/.job.ad'
[2026-04-21 03:26:53] 2026-04-21 01:26:13,266 | INFO     | total number of processed events: 400 (read)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,297 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7089567531/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,298 | INFO     | extracted standard info from prmon json
[2026-04-21 03:26:53] 2026-04-21 01:26:13,298 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 03:26:53] 2026-04-21 01:26:13,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 03:26:53] 2026-04-21 01:26:13,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 03:26:53] 2026-04-21 01:26:13,302 | INFO     | fitting pss+swap vs Time
[2026-04-21 03:26:53] 2026-04-21 01:26:13,302 | INFO     | sum of square deviations: 1931608310.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,303 | INFO     | sum of deviations: -12618393205.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,303 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,304 | INFO     | mean y: 2333640.565217391
[2026-04-21 03:26:53] 2026-04-21 01:26:13,304 | INFO     | intersect: 2333640.565217391
[2026-04-21 03:26:53] 2026-04-21 01:26:13,304 | INFO     | chi2: 2.1253337515988004
[2026-04-21 03:26:53] 2026-04-21 01:26:13,304 | INFO     | sum of square deviations: 1778377530.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,305 | INFO     | sum of deviations: -291597263.00000006
[2026-04-21 03:26:53] 2026-04-21 01:26:13,305 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,306 | INFO     | mean y: 2345646.849162011
[2026-04-21 03:26:53] 2026-04-21 01:26:13,306 | INFO     | intersect: 2345646.849162011
[2026-04-21 03:26:53] 2026-04-21 01:26:13,306 | INFO     | chi2: 1.2656398631139343
[2026-04-21 03:26:53] 2026-04-21 01:26:13,306 | INFO     | current chi2=1.2656398631139343 (change=40.449829954385 %)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,306 | INFO     | sum of square deviations: 1633472487.5
[2026-04-21 03:26:53] 2026-04-21 01:26:13,307 | INFO     | sum of deviations: -139021988.99999744
[2026-04-21 03:26:53] 2026-04-21 01:26:13,307 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,308 | INFO     | mean y: 2345807.3333333335
[2026-04-21 03:26:53] 2026-04-21 01:26:13,308 | INFO     | intersect: 2345807.3333333335
[2026-04-21 03:26:53] 2026-04-21 01:26:13,308 | INFO     | chi2: 1.2659097205955268
[2026-04-21 03:26:53] 2026-04-21 01:26:13,308 | INFO     | current chi2=1.2659097205955268 (change=-0.021321822222675972 %)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,308 | INFO     | right removable region: 173
[2026-04-21 03:26:53] 2026-04-21 01:26:13,309 | INFO     | sum of square deviations: 1778377530.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | sum of deviations: -31591027090.000008
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | mean y: 2352165.3016759777
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | intersect: 2352165.3016759777
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | chi2: 0.9105940984514825
[2026-04-21 03:26:53] 2026-04-21 01:26:13,310 | INFO     | current chi2=0.9105940984514825 (change=57.155242193538754 %)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,311 | INFO     | sum of square deviations: 1633472487.5
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | sum of deviations: -28704397107.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | mean y: 2349129.804597701
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | intersect: 2349129.804597701
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | chi2: 0.9096429791765465
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | current chi2=0.9096429791765465 (change=0.1044504106224175 %)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,312 | INFO     | left removable region: 10
[2026-04-21 03:26:53] 2026-04-21 01:26:13,313 | INFO     | sum of square deviations: 1342841922.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | sum of deviations: -15931085739.999998
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | mean x (centered): 0.0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | mean y: 2363127.1717791413
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | intersect: 2363127.1717791413
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | chi2: 0.023426087053219417
[2026-04-21 03:26:53] 2026-04-21 01:26:13,314 | INFO     | current memory leak: -11.86 B/s (using 163 data points, chi2=0.02)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | could have reported an average CPU frequency of 2714 MHz (10 samples)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | ..............................
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | . Timing measurements:
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | . get job = 0 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | . initial setup = 8 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | . payload setup = 15 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,315 | INFO     | . stage-in = 0 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,316 | INFO     | . payload execution = 11171 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,316 | INFO     | . stage-out = 0 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,316 | INFO     | . log creation = 0 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,316 | INFO     | ..............................
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | 
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | job summary report
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | --------------------------------------------------
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | PanDA job id: 7089567531
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | task id: 49645815
[2026-04-21 03:26:53] 2026-04-21 01:26:13,409 | INFO     | errors: (none)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | pilot state: finished 
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | transexitcode: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | exeerrorcode: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | exeerrordiag: 
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | exitcode: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | exitmsg: OK
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | cpuconsumptiontime: 43064 s
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | nevents: 400
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | neventsw: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:13,410 | INFO     | pid: 2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | pgrp: 2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | corecount: 4
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | event service: False
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | sizes: {0: 2281699, 1: 2283528, 11: 2283528, 11190: 2313438, 11191: 2322460, 11193: 2322866}
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | --------------------------------------------------
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | 
[2026-04-21 03:26:53] 2026-04-21 01:26:13,411 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | job 7089567531 has completed (purged errors)
[2026-04-21 03:26:53] 2026-04-21 01:26:13,447 | INFO     | overall cleanup function is called
[2026-04-21 03:26:53] 2026-04-21 01:26:13,583 | INFO     | number of running child processes to parent process 2879246: 1
[2026-04-21 03:26:53] 2026-04-21 01:26:13,583 | INFO     | maximum number of monitored processes: 6
[2026-04-21 03:26:53] 2026-04-21 01:26:13,583 | INFO     | aborting job monitoring since job object (job id=7089567531) has expired
[2026-04-21 03:26:53] 2026-04-21 01:26:14,458 | INFO     | --- collectZombieJob: --- 10, [2879246]
[2026-04-21 03:26:53] 2026-04-21 01:26:14,458 | INFO     | zombie collector waiting for pid 2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:14,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 03:26:53] 2026-04-21 01:26:14,458 | INFO     | collected zombie processes
[2026-04-21 03:26:53] 2026-04-21 01:26:14,458 | INFO     | will attempt to kill all subprocesses of pid=2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:15,202 | INFO     | process IDs to be killed: [2879246] (in reverse order)
[2026-04-21 03:26:53] 2026-04-21 01:26:15,497 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 03:26:53] 2026-04-21 01:26:15,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 03:26:53] 2026-04-21 01:26:15,526 | INFO     | did not find any defunct processes belonging to 2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:15,550 | INFO     | did not find any defunct processes belonging to 2879246
[2026-04-21 03:26:53] 2026-04-21 01:26:15,551 | INFO     | Ready for new job
[2026-04-21 03:26:53] 2026-04-21 01:26:15,553 | INFO     | **************************************
[2026-04-21 03:26:53] 2026-04-21 01:26:15,553 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 03:26:53] 2026-04-21 01:26:15,553 | INFO     | **************************************
[2026-04-21 03:26:53] 2026-04-21 01:26:15,553 | INFO     | 
[2026-04-21 03:26:53] 2026-04-21 01:26:15,561 | INFO     | architecture information:
[2026-04-21 03:26:53] 2026-04-21 01:26:15,561 | INFO     | executing command: cat /etc/os-release
[2026-04-21 03:26:53] 2026-04-21 01:26:15,586 | INFO     | cat /etc/os-release:
[2026-04-21 03:26:53] NAME="CentOS Linux"
[2026-04-21 03:26:53] VERSION="7 (Core)"
[2026-04-21 03:26:53] ID="centos"
[2026-04-21 03:26:53] ID_LIKE="rhel fedora"
[2026-04-21 03:26:53] VERSION_ID="7"
[2026-04-21 03:26:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 03:26:53] ANSI_COLOR="0;31"
[2026-04-21 03:26:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 03:26:53] HOME_URL="https://www.centos.org/"
[2026-04-21 03:26:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 03:26:53] 
[2026-04-21 03:26:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 03:26:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 03:26:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 03:26:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 03:26:53] 
[2026-04-21 03:26:53] 2026-04-21 01:26:15,586 | INFO     | **************************************
[2026-04-21 03:26:53] 2026-04-21 01:26:16,089 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-04-21 03:26:53] 2026-04-21 01:26:16,117 | INFO     | sufficient remaining disk space (194001240064 B)
[2026-04-21 03:26:53] 2026-04-21 01:26:16,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 03:26:53] 2026-04-21 01:26:16,118 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 03:26:53] 2026-04-21 01:26:16,118 | INFO     | update_server=False
[2026-04-21 03:26:53] 2026-04-21 01:26:16,118 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 03:26:53] 2026-04-21 01:26:16,415 | INFO     | all payload control threads have been joined
[2026-04-21 03:26:53] 2026-04-21 01:26:16,449 | INFO     | all data control threads have been joined
[2026-04-21 03:26:53] 2026-04-21 01:26:16,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 03:26:53] 2026-04-21 01:26:17,025 | INFO     | all job control threads have been joined
[2026-04-21 03:26:53] 2026-04-21 01:26:17,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 03:26:53] 2026-04-21 01:26:17,091 | INFO     | aborting loop
[2026-04-21 03:26:53] 2026-04-21 01:26:17,124 | INFO     | [job] retrieve thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,172 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,242 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,272 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,295 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,420 | INFO     | [payload] control thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,453 | INFO     | [data] control thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,732 | INFO     | [payload] validate_post thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:17,850 | INFO     | [data] copytool_in thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:18,030 | INFO     | [job] control thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:18,096 | INFO     | [job] job monitor thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:18,296 | INFO     | [job] validate thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:18,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 03:26:53] 2026-04-21 01:26:18,695 | INFO     | [payload] failed_post thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:18,875 | INFO     | [data] copytool_out thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:19,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 03:26:53] 2026-04-21 01:26:19,424 | INFO     | [job] queue monitor thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:23,271 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 03:26:53] 2026-04-21 01:26:46,106 | INFO     | [monitor] cgroup control has ended
[2026-04-21 03:26:53] 2026-04-21 01:26:46,797 | INFO     | PID=2873768 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 03:26:53] 2026-04-21 01:26:46,797 | INFO     | .. there are 19 such processes running
[2026-04-21 03:26:53] 2026-04-21 01:26:46,797 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 03:26:53] 2026-04-21 01:26:46,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 03:26:53] 2026-04-21 01:26:46,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 03:26:53] 2026-04-21 01:26:47,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23021177784128)>', '<ExcThread(monitor, started 23020940048128)>']
[2026-04-21 03:26:53] 2026-04-21 01:26:47,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 03:26:53] 2026-04-21 01:26:47,802 | INFO     | [monitor] control thread has ended
[2026-04-21 03:26:53] 2026-04-21 01:26:52,546 | INFO     | all workflow threads have been joined
[2026-04-21 03:26:53] 2026-04-21 01:26:52,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 03:26:53] 2026-04-21 01:26:52,547 | INFO     | traces error code: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:52,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 03:26:53] 2026-04-21 01:26:52,691 [wrapper] ==== pilot stdout END ====
[2026-04-21 03:26:53] 2026-04-21 01:26:52,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 03:26:53] 2026-04-21 01:26:52,699 [wrapper] pilotpid: 2873768
[2026-04-21 03:26:53] 2026-04-21 01:26:52,703 [wrapper] Pilot exit status: 0
[2026-04-21 03:26:53] 2026-04-21 01:26:52,718 [wrapper] pandaids: 7089567531
[2026-04-21 03:26:53] 2026-04-21 01:26:52,901 [wrapper] cleanup supervisor_pilot 3212649 2873769
[2026-04-21 03:26:53] 2026-04-21 01:26:52,906 [wrapper] Test setup, not cleaning
[2026-04-21 03:26:53] 2026-04-21 01:26:52,909 [wrapper] apfmon messages muted
[2026-04-21 03:26:53] 2026-04-21 01:26:52,912 [wrapper] ==== wrapper stdout END ====
[2026-04-21 03:26:53] 2026-04-21 01:26:52,916 [wrapper] ==== wrapper stderr END ====
[2026-04-21 03:26:53]  *** Error codes and diagnostics ***
[2026-04-21 03:26:53]     "exeErrorCode": 0,
[2026-04-21 03:26:53]     "pilotErrorCode": 0,
[2026-04-21 03:26:53]  *** Listing of results directory ***
[2026-04-21 03:26:53] total 416392
[2026-04-21 03:26:53] -rwx------. 1 boinc boinc     36322 Apr 18 11:51 runpilot2-wrapper.sh
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc    644190 Apr 18 12:05 pilot3.tar.gz
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc      5094 Apr 18 12:05 queuedata.json
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc       100 Apr 21 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 03:26:53] -rwxr-xr-x. 1 boinc boinc      7986 Apr 21 00:18 run_atlas
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc       105 Apr 21 00:18 job.xml
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc 223260951 Apr 21 00:19 EVNT.48629115._000637.pool.root.1
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc      6541 Apr 21 00:19 init_data.xml
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:19 start_atlas.sh
[2026-04-21 03:26:53] drwxrwx--x. 2 boinc boinc      4096 Apr 21 00:19 shared
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc    656947 Apr 21 00:19 input.tar.gz
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc         0 Apr 21 00:19 boinc_lockfile
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc      2629 Apr 21 00:19 pandaJob.out
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc    997494 Apr 21 00:19 agis_schedconf.cvmfs.json
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc       444 Apr 21 00:19 workernode_map.json
[2026-04-21 03:26:53] drwx------. 5 boinc boinc      4096 Apr 21 00:19 pilot3
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc 196328346 Apr 21 03:25 HITS.49645815._015962.pool.root.1
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc       488 Apr 21 03:25 boinc_task_state.xml
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc        95 Apr 21 03:25 pilot_heartbeat.json
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc      1027 Apr 21 03:26 memory_monitor_summary.json
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc   1512404 Apr 21 03:26 agis_ddmendpoints.agis.ALL.json
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc    321615 Apr 21 03:26 log.49645815._015962.job.log.tgz.1
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc      6380 Apr 21 03:26 heartbeat_new.json
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc      6271 Apr 21 03:26 heartbeat.json
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc      8192 Apr 21 03:26 boinc_mmap_file
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc        28 Apr 21 03:26 wrapper_checkpoint.txt
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc      4831 Apr 21 03:26 pilotlog.txt
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc   1047518 Apr 21 03:26 log.49645815._015962.job.log.1
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc       357 Apr 21 03:26 output.list
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc       410 Apr 21 03:26 runtime_log
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc   1382400 Apr 21 03:26 result.tar.gz
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc      8844 Apr 21 03:26 runtime_log.err
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc       666 Apr 21 03:26 540b660f26bd.diag
[2026-04-21 03:26:53] -rw-r--r--. 1 boinc boinc     20848 Apr 21 03:26 stderr.txt
[2026-04-21 03:26:53] HITS file was successfully produced:
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc 196328346 Apr 21 03:25 shared/HITS.pool.root.1
[2026-04-21 03:26:53]  *** Contents of shared directory: ***
[2026-04-21 03:26:53] total 411780
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc 223260951 Apr 21 00:19 ATLAS.root_0
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:19 start_atlas.sh
[2026-04-21 03:26:53] -rw-r--r--. 2 boinc boinc    656947 Apr 21 00:19 input.tar.gz
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc 196328346 Apr 21 03:25 HITS.pool.root.1
[2026-04-21 03:26:53] -rw-------. 1 boinc boinc   1382400 Apr 21 03:26 result.tar.gz
03:26:54 (2869291): run_atlas exited; CPU time 43664.524510
03:26:54 (2869291): called boinc_finish(0)

</stderr_txt>
]]>

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