Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:25 (823749): wrapper (7.7.26015): starting
09:56:25 (823749): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 09:56:25] Arguments: --nthreads 8
[2026-04-18 09:56:25] Threads: 8
[2026-04-18 09:56:25] Checking for CVMFS
[2026-04-18 09:56:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 09:56:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 09:56:26] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 09:56:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 09:56:27] 2.13.3.0 6454 164842 424852 158585 3 563 35357481 40960001 24522 16776704 0 395594194 99.621 445643662 39026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 09:56:27] CVMFS is ok
[2026-04-18 09:56:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 09:56:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 09:56:27] Further information can be found at the LHC@home message board.
[2026-04-18 09:56:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 09:56:27] Checking for apptainer binary...
[2026-04-18 09:56:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 09:56:27] Running /usr/bin/apptainer --version
[2026-04-18 09:56:28] apptainer version 1.4.5-2.el9
[2026-04-18 09:56:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 09:56:28] c-206-40.aglt2.org
[2026-04-18 09:56:28] apptainer works
[2026-04-18 09:56:29] Set ATHENA_PROC_NUMBER=8
[2026-04-18 09:56:29] Set ATHENA_CORE_NUMBER=8
[2026-04-18 09:56:29] Starting ATLAS job with PandaID=7088965305
[2026-04-18 09:56:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 13:21:27]  *** The last 200 lines of the pilot log: ***
[2026-04-18 13:21:27] 2026-04-18 17:20:43,065 | INFO     | this job has now completed (state=finished)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,065 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,065 | INFO     | log transfer has been attempted: DONE
[2026-04-18 13:21:27] 2026-04-18 17:20:43,065 | INFO     | job 7088965305 has finished - writing final server update
[2026-04-18 13:21:27] 2026-04-18 17:20:43,065 | INFO     | total number of processed events: 400 (read)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,133 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7088965305/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,134 | INFO     | extracted standard info from prmon json
[2026-04-18 13:21:27] 2026-04-18 17:20:43,134 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 13:21:27] 2026-04-18 17:20:43,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 13:21:27] 2026-04-18 17:20:43,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 13:21:27] 2026-04-18 17:20:43,151 | INFO     | fitting pss+swap vs Time
[2026-04-18 13:21:27] 2026-04-18 17:20:43,151 | INFO     | sum of square deviations: 2370732804.142139
[2026-04-18 13:21:27] 2026-04-18 17:20:43,179 | INFO     | sum of deviations: 90420225359.9798
[2026-04-18 13:21:27] 2026-04-18 17:20:43,179 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,179 | INFO     | mean y: 2422310.847715736
[2026-04-18 13:21:27] 2026-04-18 17:20:43,179 | INFO     | intersect: 2422310.847715736
[2026-04-18 13:21:27] 2026-04-18 17:20:43,180 | INFO     | chi2: 6.49556132905828
[2026-04-18 13:21:27] 2026-04-18 17:20:43,180 | INFO     | sum of square deviations: 2194746765.369786
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | sum of deviations: 101026827876.41658
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | mean y: 2431270.4166666665
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | intersect: 2431270.4166666665
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | chi2: 5.771963621192402
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | current chi2=5.771963621192402 (change=11.139879545572457 %)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | right removable region: 191
[2026-04-18 13:21:27] 2026-04-18 17:20:43,181 | INFO     | sum of square deviations: 2194762749.119782
[2026-04-18 13:21:27] 2026-04-18 17:20:43,182 | INFO     | sum of deviations: 25962330490.54168
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | mean y: 2478088.9583333335
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | intersect: 2478088.9583333335
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | chi2: 2.12568620788048
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | current chi2=2.12568620788048 (change=67.2747881176782 %)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,214 | INFO     | sum of square deviations: 2027723094.09625
[2026-04-18 13:21:27] 2026-04-18 17:20:43,215 | INFO     | sum of deviations: -6291494279.962567
[2026-04-18 13:21:27] 2026-04-18 17:20:43,215 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,215 | INFO     | mean y: 2507405.304812834
[2026-04-18 13:21:27] 2026-04-18 17:20:43,215 | INFO     | intersect: 2507405.304812834
[2026-04-18 13:21:27] 2026-04-18 17:20:43,216 | INFO     | chi2: 1.022009501724352
[2026-04-18 13:21:27] 2026-04-18 17:20:43,216 | INFO     | current chi2=1.022009501724352 (change=51.920960961430104 %)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,216 | INFO     | sum of square deviations: 1869381276.5714238
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | sum of deviations: -19778823764.714294
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | mean y: 2520349.2472527474
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | intersect: 2520349.2472527474
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | chi2: 0.81739300546036
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | current chi2=0.81739300546036 (change=20.02099744853248 %)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | left removable region: 15
[2026-04-18 13:21:27] 2026-04-18 17:20:43,217 | INFO     | sum of square deviations: 1690512103.3125
[2026-04-18 13:21:27] 2026-04-18 17:20:43,252 | INFO     | sum of deviations: -7177297559.999997
[2026-04-18 13:21:27] 2026-04-18 17:20:43,252 | INFO     | mean x (centered): 0.0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,253 | INFO     | mean y: 2532901.4545454546
[2026-04-18 13:21:27] 2026-04-18 17:20:43,253 | INFO     | intersect: 2532901.4545454546
[2026-04-18 13:21:27] 2026-04-18 17:20:43,253 | INFO     | chi2: 0.029647296419154305
[2026-04-18 13:21:27] 2026-04-18 17:20:43,253 | INFO     | current memory leak: -4.25 B/s (using 176 data points, chi2=0.03)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | could have reported an average CPU frequency of 3288 MHz (10 samples)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | ..............................
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . Timing measurements:
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . get job = 0 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . initial setup = 27 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . payload setup = 134 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . stage-in = 0 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . payload execution = 12019 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . stage-out = 4 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | . log creation = 0 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,254 | INFO     | ..............................
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | 
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | job summary report
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | --------------------------------------------------
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | PanDA job id: 7088965305
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | task id: 49263200
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | errors: (none)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | pilot state: finished 
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | transexitcode: 0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,610 | INFO     | exeerrorcode: 0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | exeerrordiag: 
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | exitcode: 0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | exitmsg: OK
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | cpuconsumptiontime: 33250 s
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | nevents: 400
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | neventsw: 0
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | pid: 838046
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | pgrp: 838046
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | corecount: 8
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | event service: False
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | sizes: {0: 2281583, 1: 2281667, 2: 2283496, 12154: 2313347, 12161: 2322401, 12164: 2322539}
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | --------------------------------------------------
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | 
[2026-04-18 13:21:27] 2026-04-18 17:20:43,611 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 13:21:27] 2026-04-18 17:20:43,907 | INFO     | job 7088965305 has completed (purged errors)
[2026-04-18 13:21:27] 2026-04-18 17:20:43,908 | INFO     | overall cleanup function is called
[2026-04-18 13:21:27] 2026-04-18 17:20:44,978 | INFO     | --- collectZombieJob: --- 10, [838046]
[2026-04-18 13:21:27] 2026-04-18 17:20:44,979 | INFO     | zombie collector waiting for pid 838046
[2026-04-18 13:21:27] 2026-04-18 17:20:44,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 13:21:27] 2026-04-18 17:20:44,979 | INFO     | collected zombie processes
[2026-04-18 13:21:27] 2026-04-18 17:20:44,979 | INFO     | will attempt to kill all subprocesses of pid=838046
[2026-04-18 13:21:27] 2026-04-18 17:20:47,202 | INFO     | process IDs to be killed: [838046] (in reverse order)
[2026-04-18 13:21:27] 2026-04-18 17:20:47,713 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 13:21:27] 2026-04-18 17:20:47,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 13:21:27] 2026-04-18 17:20:47,757 | INFO     | did not find any defunct processes belonging to 838046
[2026-04-18 13:21:27] 2026-04-18 17:20:47,875 | INFO     | did not find any defunct processes belonging to 838046
[2026-04-18 13:21:27] 2026-04-18 17:20:47,875 | INFO     | Ready for new job
[2026-04-18 13:21:27] 2026-04-18 17:20:47,877 | INFO     | **************************************
[2026-04-18 13:21:27] 2026-04-18 17:20:47,877 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 13:21:27] 2026-04-18 17:20:47,877 | INFO     | **************************************
[2026-04-18 13:21:27] 2026-04-18 17:20:47,877 | INFO     | 
[2026-04-18 13:21:27] 2026-04-18 17:20:47,903 | INFO     | architecture information:
[2026-04-18 13:21:27] 2026-04-18 17:20:47,931 | INFO     | executing command: cat /etc/os-release
[2026-04-18 13:21:27] 2026-04-18 17:20:48,070 | INFO     | cat /etc/os-release:
[2026-04-18 13:21:27] NAME="CentOS Linux"
[2026-04-18 13:21:27] VERSION="7 (Core)"
[2026-04-18 13:21:27] ID="centos"
[2026-04-18 13:21:27] ID_LIKE="rhel fedora"
[2026-04-18 13:21:27] VERSION_ID="7"
[2026-04-18 13:21:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 13:21:27] ANSI_COLOR="0;31"
[2026-04-18 13:21:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 13:21:27] HOME_URL="https://www.centos.org/"
[2026-04-18 13:21:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 13:21:27] 
[2026-04-18 13:21:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 13:21:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 13:21:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 13:21:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 13:21:27] 
[2026-04-18 13:21:27] 2026-04-18 17:20:48,084 | INFO     | **************************************
[2026-04-18 13:21:27] 2026-04-18 17:20:48,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-18 13:21:27] 2026-04-18 17:20:48,697 | INFO     | sufficient remaining disk space (79119253504 B)
[2026-04-18 13:21:27] 2026-04-18 17:20:48,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 13:21:27] 2026-04-18 17:20:48,697 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 13:21:27] 2026-04-18 17:20:48,698 | INFO     | update_server=False
[2026-04-18 13:21:27] 2026-04-18 17:20:48,698 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 13:21:27] 2026-04-18 17:20:48,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:21:27] 2026-04-18 17:20:48,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 13:21:27] 2026-04-18 17:20:48,886 | INFO     | all payload control threads have been joined
[2026-04-18 13:21:27] 2026-04-18 17:20:49,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:21:27] 2026-04-18 17:20:49,593 | INFO     | aborting loop
[2026-04-18 13:21:27] 2026-04-18 17:20:49,707 | INFO     | [job] retrieve thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:49,721 | INFO     | [job] queue monitor thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:49,761 | INFO     | all data control threads have been joined
[2026-04-18 13:21:27] 2026-04-18 17:20:49,892 | INFO     | [payload] control thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:49,897 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,096 | INFO     | all job control threads have been joined
[2026-04-18 13:21:27] 2026-04-18 17:20:50,130 | INFO     | [job] validate thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,200 | INFO     | [data] copytool_in thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,326 | INFO     | [payload] failed_post thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,566 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,599 | INFO     | [job] job monitor thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,743 | INFO     | [data] copytool_out thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,769 | INFO     | [data] control thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:50,965 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:51,025 | INFO     | [payload] validate_post thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:51,104 | INFO     | [job] control thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:51,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 13:21:27] 2026-04-18 17:20:55,420 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:20:59,402 | INFO     | job.realtimelogging is not enabled
[2026-04-18 13:21:27] 2026-04-18 17:21:00,411 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 13:21:27] 2026-04-18 17:21:17,156 | INFO     | PID=828080 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-18 13:21:27] 2026-04-18 17:21:17,156 | INFO     | .. there are 25 such processes running
[2026-04-18 13:21:27] 2026-04-18 17:21:17,156 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 13:21:27] 2026-04-18 17:21:17,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 13:21:27] 2026-04-18 17:21:17,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 13:21:27] 2026-04-18 17:21:18,241 | INFO     | [monitor] cgroup control has ended
[2026-04-18 13:21:27] 2026-04-18 17:21:19,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402359437120)>', '<ExcThread(monitor, started 140402002749184)>']
[2026-04-18 13:21:27] 2026-04-18 17:21:20,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 13:21:27] 2026-04-18 17:21:20,175 | INFO     | [monitor] control thread has ended
[2026-04-18 13:21:27] 2026-04-18 17:21:24,288 | INFO     | all workflow threads have been joined
[2026-04-18 13:21:27] 2026-04-18 17:21:24,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 13:21:27] 2026-04-18 17:21:24,289 | INFO     | traces error code: 0
[2026-04-18 13:21:27] 2026-04-18 17:21:24,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 13:21:27] 2026-04-18 17:21:26,893 [wrapper] ==== pilot stdout END ====
[2026-04-18 13:21:27] 2026-04-18 17:21:26,951 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 13:21:27] 2026-04-18 17:21:27,016 [wrapper] pilotpid: 828080
[2026-04-18 13:21:27] 2026-04-18 17:21:27,052 [wrapper] Pilot exit status: 0
[2026-04-18 13:21:27] 2026-04-18 17:21:27,228 [wrapper] pandaids: 7088965305
[2026-04-18 13:21:27] 2026-04-18 17:21:27,337 [wrapper] cleanup supervisor_pilot 1573136 828081
[2026-04-18 13:21:27] 2026-04-18 17:21:27,340 [wrapper] Test setup, not cleaning
[2026-04-18 13:21:27] 2026-04-18 17:21:27,342 [wrapper] apfmon messages muted
[2026-04-18 13:21:27] 2026-04-18 17:21:27,348 [wrapper] ==== wrapper stdout END ====
[2026-04-18 13:21:27] 2026-04-18 17:21:27,363 [wrapper] ==== wrapper stderr END ====
[2026-04-18 13:21:27]  *** Error codes and diagnostics ***
[2026-04-18 13:21:27]     "exeErrorCode": 0,
[2026-04-18 13:21:27]     "pilotErrorCode": 0,
[2026-04-18 13:21:27]  *** Listing of results directory ***
[2026-04-18 13:21:27] total 424476
[2026-04-18 13:21:27] -rwx------. 1 boincer umatlas     36322 Apr 18 05:50 runpilot2-wrapper.sh
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 06:05 pilot3.tar.gz
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 06:05 queuedata.json
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas       100 Apr 18 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 13:21:27] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 09:56 run_atlas
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas       105 Apr 18 09:56 job.xml
[2026-04-18 13:21:27] -rw-r--r--. 2 boincer umatlas 224556845 Apr 18 09:56 EVNT.49263198._001631.pool.root.1
[2026-04-18 13:21:27] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 09:56 start_atlas.sh
[2026-04-18 13:21:27] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 09:56 shared
[2026-04-18 13:21:27] -rw-r--r--. 2 boincer umatlas    656924 Apr 18 09:56 input.tar.gz
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas         0 Apr 18 09:56 boinc_lockfile
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas      2576 Apr 18 09:56 pandaJob.out
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas        57 Apr 18 09:56 setup.sh.local
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas    997973 Apr 18 09:57 agis_schedconf.cvmfs.json
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas       430 Apr 18 09:57 workernode_map.json
[2026-04-18 13:21:27] drwx------. 5 boincer umatlas      4096 Apr 18 09:57 pilot3
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas      6824 Apr 18 13:18 init_data.xml
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas 203169245 Apr 18 13:19 HITS.49263200._059028.pool.root.1
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas       488 Apr 18 13:19 boinc_task_state.xml
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas        95 Apr 18 13:20 pilot_heartbeat.json
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas      1051 Apr 18 13:20 memory_monitor_summary.json
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas   1512404 Apr 18 13:20 agis_ddmendpoints.agis.ALL.json
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas    369421 Apr 18 13:20 log.49263200._059028.job.log.tgz.1
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas      6378 Apr 18 13:20 heartbeat_new.json
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas      6269 Apr 18 13:20 heartbeat.json
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 13:21 boinc_mmap_file
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas        28 Apr 18 13:21 wrapper_checkpoint.txt
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas      4890 Apr 18 13:21 pilotlog.txt
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas   1068572 Apr 18 13:21 log.49263200._059028.job.log.1
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas       357 Apr 18 13:21 output.list
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas       410 Apr 18 13:21 runtime_log
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas   1454080 Apr 18 13:21 result.tar.gz
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas      8964 Apr 18 13:21 runtime_log.err
[2026-04-18 13:21:27] -rw-------. 1 boincer umatlas       658 Apr 18 13:21 53fefa207fd7.diag
[2026-04-18 13:21:27] -rw-r--r--. 1 boincer umatlas     20904 Apr 18 13:21 stderr.txt
[2026-04-18 13:21:27] HITS file was successfully produced:
[2026-04-18 13:21:28] -rw-------. 1 boincer umatlas 203169245 Apr 18 13:19 shared/HITS.pool.root.1
[2026-04-18 13:21:28]  *** Contents of shared directory: ***
[2026-04-18 13:21:28] total 419792
[2026-04-18 13:21:28] -rw-r--r--. 2 boincer umatlas 224556845 Apr 18 09:56 ATLAS.root_0
[2026-04-18 13:21:28] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 09:56 start_atlas.sh
[2026-04-18 13:21:28] -rw-r--r--. 2 boincer umatlas    656924 Apr 18 09:56 input.tar.gz
[2026-04-18 13:21:28] -rw-------. 1 boincer umatlas 203169245 Apr 18 13:19 HITS.pool.root.1
[2026-04-18 13:21:28] -rw-------. 1 boincer umatlas   1454080 Apr 18 13:21 result.tar.gz
13:21:29 (823749): run_atlas exited; CPU time 33481.430981
13:21:29 (823749): called boinc_finish(0)

</stderr_txt>
]]>

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