Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:02:16 (9838): wrapper (7.7.26015): starting
09:02:16 (9838): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 09:02:16] Arguments: --nthreads 8
[2026-04-18 09:02:16] Threads: 8
[2026-04-18 09:02:16] Checking for CVMFS
[2026-04-18 09:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 09:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 09:02:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 09:02:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 09:02:17] 2.11.2.0 4329 172296 268376 158584 0 188 9993295 18432001 1833 130560 0 86744068 99.962 7536748 20171 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 09:02:17] CVMFS is ok
[2026-04-18 09:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 09:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 09:02:17] Further information can be found at the LHC@home message board.
[2026-04-18 09:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 09:02:17] Checking for apptainer binary...
[2026-04-18 09:02:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 09:02:17] Running /usr/bin/apptainer --version
[2026-04-18 09:02:17] apptainer version 1.3.2-1.el7
[2026-04-18 09:02:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 09:02:18] c-206-17.aglt2.org
[2026-04-18 09:02:18] apptainer works
[2026-04-18 09:02:18] Set ATHENA_PROC_NUMBER=8
[2026-04-18 09:02:18] Set ATHENA_CORE_NUMBER=8
[2026-04-18 09:02:18] Starting ATLAS job with PandaID=7086995132
[2026-04-18 09:02:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 11:52:19]  *** The last 200 lines of the pilot log: ***
[2026-04-18 11:52:19] 2026-04-18 15:51:46,864 | INFO     | mean y: 2471940.832298137
[2026-04-18 11:52:19] 2026-04-18 15:51:46,864 | INFO     | intersect: 2471940.832298137
[2026-04-18 11:52:19] 2026-04-18 15:51:46,864 | INFO     | chi2: 1.458032328941458
[2026-04-18 11:52:19] 2026-04-18 15:51:46,864 | INFO     | current chi2=1.458032328941458 (change=-0.07376537851563397 %)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,864 | INFO     | right removable region: 160
[2026-04-18 11:52:19] 2026-04-18 15:51:46,865 | INFO     | sum of square deviations: 1294014960.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,865 | INFO     | sum of deviations: 6089502449.000001
[2026-04-18 11:52:19] 2026-04-18 15:51:46,865 | INFO     | mean x (centered): 0.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,866 | INFO     | mean y: 2505226.5590062113
[2026-04-18 11:52:19] 2026-04-18 15:51:46,866 | INFO     | intersect: 2505226.5590062113
[2026-04-18 11:52:19] 2026-04-18 15:51:46,866 | INFO     | chi2: 0.025310217208919464
[2026-04-18 11:52:19] 2026-04-18 15:51:46,866 | INFO     | current chi2=0.025310217208919464 (change=98.2628034451859 %)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,866 | INFO     | sum of square deviations: 1177156955.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,867 | INFO     | sum of deviations: 4698692475.5
[2026-04-18 11:52:19] 2026-04-18 15:51:46,867 | INFO     | mean x (centered): 0.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,867 | INFO     | mean y: 2506969.1474358975
[2026-04-18 11:52:19] 2026-04-18 15:51:46,867 | INFO     | intersect: 2506969.1474358975
[2026-04-18 11:52:19] 2026-04-18 15:51:46,868 | INFO     | chi2: 0.0073191369450307095
[2026-04-18 11:52:19] 2026-04-18 15:51:46,868 | INFO     | current chi2=0.0073191369450307095 (change=71.08228315618167 %)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,868 | INFO     | sum of square deviations: 1067554900.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | sum of deviations: 5731862377.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | mean x (centered): 0.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | mean y: 2505564.1655629138
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | intersect: 2505564.1655629138
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | chi2: 0.0004351621571527084
[2026-04-18 11:52:19] 2026-04-18 15:51:46,869 | INFO     | current chi2=0.0004351621571527084 (change=94.05446078655272 %)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,870 | INFO     | sum of square deviations: 964976232.5
[2026-04-18 11:52:19] 2026-04-18 15:51:46,870 | INFO     | sum of deviations: 5140877998.5
[2026-04-18 11:52:19] 2026-04-18 15:51:46,870 | INFO     | mean x (centered): 0.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,870 | INFO     | mean y: 2506441.801369863
[2026-04-18 11:52:19] 2026-04-18 15:51:46,871 | INFO     | intersect: 2506441.801369863
[2026-04-18 11:52:19] 2026-04-18 15:51:46,871 | INFO     | chi2: 0.0004271955361204864
[2026-04-18 11:52:19] 2026-04-18 15:51:46,871 | INFO     | current chi2=0.0004271955361204864 (change=1.83072468533295 %)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,871 | INFO     | left removable region: 20
[2026-04-18 11:52:19] 2026-04-18 15:51:46,871 | INFO     | sum of square deviations: 850825255.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,872 | INFO     | sum of deviations: 4491749548.5
[2026-04-18 11:52:19] 2026-04-18 15:51:46,872 | INFO     | mean x (centered): 0.0
[2026-04-18 11:52:19] 2026-04-18 15:51:46,872 | INFO     | mean y: 2505400.592857143
[2026-04-18 11:52:19] 2026-04-18 15:51:46,872 | INFO     | intersect: 2505400.592857143
[2026-04-18 11:52:19] 2026-04-18 15:51:46,872 | INFO     | chi2: 0.0004242909764188977
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | current memory leak: 5.28 B/s (using 140 data points, chi2=0.00)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | could have reported an average CPU frequency of 2500 MHz (9 samples)
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | ..............................
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | . Timing measurements:
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | . get job = 0 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | . initial setup = 6 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | . payload setup = 9 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,873 | INFO     | . stage-in = 0 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,874 | INFO     | . payload execution = 10123 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,874 | INFO     | . stage-out = 0 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,874 | INFO     | . log creation = 0 s
[2026-04-18 11:52:19] 2026-04-18 15:51:46,874 | INFO     | ..............................
[2026-04-18 11:52:19] 2026-04-18 15:51:47,112 | INFO     | 
[2026-04-18 11:52:19] 2026-04-18 15:51:47,112 | INFO     | job summary report
[2026-04-18 11:52:19] 2026-04-18 15:51:47,112 | INFO     | --------------------------------------------------
[2026-04-18 11:52:19] 2026-04-18 15:51:47,112 | INFO     | PanDA job id: 7086995132
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | task id: 49263191
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | errors: (none)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | pilot state: finished 
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | transexitcode: 0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,113 | INFO     | exeerrorcode: 0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | exeerrordiag: 
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | exitcode: 0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | exitmsg: OK
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | cpuconsumptiontime: 76411 s
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | nevents: 400
[2026-04-18 11:52:19] 2026-04-18 15:51:47,114 | INFO     | neventsw: 0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | pid: 18204
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | pgrp: 18204
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | corecount: 8
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | event service: False
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | sizes: {0: 2281591, 1: 2283420, 11: 2283420, 10137: 2311999, 10138: 2320997, 10140: 2321053, 10141: 2321439}
[2026-04-18 11:52:19] 2026-04-18 15:51:47,115 | INFO     | --------------------------------------------------
[2026-04-18 11:52:19] 2026-04-18 15:51:47,116 | INFO     | 
[2026-04-18 11:52:19] 2026-04-18 15:51:47,116 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 11:52:19] 2026-04-18 15:51:47,141 | INFO     | job 7086995132 has completed (purged errors)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,141 | INFO     | overall cleanup function is called
[2026-04-18 11:52:19] 2026-04-18 15:51:47,840 | WARNING  | process 18204 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 11:52:19] 2026-04-18 15:51:47,961 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,962 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,963 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-18 11:52:19] 2026-04-18 15:51:47,963 | WARNING  | maxPSS not found in memory monitor output
[2026-04-18 11:52:19] 2026-04-18 15:51:47,963 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7086995132/payload.stdout) since it has not been created yet
[2026-04-18 11:52:19] 2026-04-18 15:51:47,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 11:52:19] 2026-04-18 15:51:47,987 | INFO     | sufficient remaining disk space (23984078848 B)
[2026-04-18 11:52:19] 2026-04-18 15:51:47,987 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-18 11:52:19] 2026-04-18 15:51:47,988 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7086995132/HITS.49263191._046716.pool.root.1 since it does not exist
[2026-04-18 11:52:19] 2026-04-18 15:51:48,145 | INFO     | number of running child processes to parent process 18204: 1
[2026-04-18 11:52:19] 2026-04-18 15:51:48,146 | INFO     | maximum number of monitored processes: 6
[2026-04-18 11:52:19] 2026-04-18 15:51:48,146 | INFO     | aborting job monitoring since job object (job id=7086995132) has expired
[2026-04-18 11:52:19] 2026-04-18 15:51:48,148 | INFO     | --- collectZombieJob: --- 10, [18204]
[2026-04-18 11:52:19] 2026-04-18 15:51:48,148 | INFO     | zombie collector waiting for pid 18204
[2026-04-18 11:52:19] 2026-04-18 15:51:48,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 11:52:19] 2026-04-18 15:51:48,149 | INFO     | collected zombie processes
[2026-04-18 11:52:19] 2026-04-18 15:51:48,149 | INFO     | will attempt to kill all subprocesses of pid=18204
[2026-04-18 11:52:19] 2026-04-18 15:51:48,288 | INFO     | process IDs to be killed: [18204] (in reverse order)
[2026-04-18 11:52:19] 2026-04-18 15:51:48,342 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 11:52:19] 2026-04-18 15:51:48,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 11:52:19] 2026-04-18 15:51:48,348 | INFO     | did not find any defunct processes belonging to 18204
[2026-04-18 11:52:19] 2026-04-18 15:51:48,353 | INFO     | did not find any defunct processes belonging to 18204
[2026-04-18 11:52:19] 2026-04-18 15:51:48,353 | INFO     | Ready for new job
[2026-04-18 11:52:19] 2026-04-18 15:51:48,355 | INFO     | **************************************
[2026-04-18 11:52:19] 2026-04-18 15:51:48,355 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 11:52:19] 2026-04-18 15:51:48,355 | INFO     | **************************************
[2026-04-18 11:52:19] 2026-04-18 15:51:48,355 | INFO     | 
[2026-04-18 11:52:19] 2026-04-18 15:51:48,356 | INFO     | architecture information:
[2026-04-18 11:52:19] 2026-04-18 15:51:48,357 | INFO     | executing command: cat /etc/os-release
[2026-04-18 11:52:19] 2026-04-18 15:51:48,373 | INFO     | cat /etc/os-release:
[2026-04-18 11:52:19] NAME="CentOS Linux"
[2026-04-18 11:52:19] VERSION="7 (Core)"
[2026-04-18 11:52:19] ID="centos"
[2026-04-18 11:52:19] ID_LIKE="rhel fedora"
[2026-04-18 11:52:19] VERSION_ID="7"
[2026-04-18 11:52:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 11:52:19] ANSI_COLOR="0;31"
[2026-04-18 11:52:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 11:52:19] HOME_URL="https://www.centos.org/"
[2026-04-18 11:52:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 11:52:19] 
[2026-04-18 11:52:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 11:52:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 11:52:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 11:52:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 11:52:19] 
[2026-04-18 11:52:19] 2026-04-18 15:51:48,374 | INFO     | **************************************
[2026-04-18 11:52:19] 2026-04-18 15:51:48,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 11:52:19] 2026-04-18 15:51:48,900 | INFO     | sufficient remaining disk space (23985127424 B)
[2026-04-18 11:52:19] 2026-04-18 15:51:48,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 11:52:19] 2026-04-18 15:51:48,901 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 11:52:19] 2026-04-18 15:51:48,901 | INFO     | update_server=False
[2026-04-18 11:52:19] 2026-04-18 15:51:48,901 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 11:52:19] 2026-04-18 15:51:48,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 11:52:19] 2026-04-18 15:51:48,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 11:52:19] 2026-04-18 15:51:48,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 11:52:19] 2026-04-18 15:51:48,902 | INFO     | will abort loop
[2026-04-18 11:52:19] 2026-04-18 15:51:49,304 | INFO     | all payload control threads have been joined
[2026-04-18 11:52:19] 2026-04-18 15:51:49,397 | INFO     | all data control threads have been joined
[2026-04-18 11:52:19] 2026-04-18 15:51:49,906 | INFO     | [job] retrieve thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:49,908 | INFO     | [job] job monitor thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:49,908 | INFO     | [job] queue monitor thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:49,960 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:49,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 11:52:19] 2026-04-18 15:51:49,994 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,310 | INFO     | [payload] control thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,315 | INFO     | [payload] failed_post thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,402 | INFO     | [data] control thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,491 | INFO     | all job control threads have been joined
[2026-04-18 11:52:19] 2026-04-18 15:51:50,524 | INFO     | [data] copytool_in thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,614 | INFO     | [job] validate thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,699 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,900 | INFO     | [payload] validate_post thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:50,916 | INFO     | [monitor] cgroup control has ended
[2026-04-18 11:52:19] 2026-04-18 15:51:51,493 | INFO     | [job] control thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:51,981 | INFO     | [data] copytool_out thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:52,910 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:51:59,522 | INFO     | job.realtimelogging is not enabled
[2026-04-18 11:52:19] 2026-04-18 15:52:00,527 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 11:52:19] 2026-04-18 15:52:02,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790953387840)>', '<ExcThread(monitor, started 139790213166848)>']
[2026-04-18 11:52:19] 2026-04-18 15:52:07,182 | INFO     | all workflow threads have been joined
[2026-04-18 11:52:19] 2026-04-18 15:52:07,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 11:52:19] 2026-04-18 15:52:07,183 | INFO     | traces error code: 0
[2026-04-18 11:52:19] 2026-04-18 15:52:07,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 11:52:19] 2026-04-18 15:52:19,535 | INFO     | PID=13795 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 11:52:19] 2026-04-18 15:52:19,535 | INFO     | .. there are 3 such processes running
[2026-04-18 11:52:19] 2026-04-18 15:52:19,536 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 11:52:19] 2026-04-18 15:52:19,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 11:52:19] 2026-04-18 15:52:19,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 11:52:19] 2026-04-18 15:52:19,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 11:52:19] 2026-04-18 15:52:19,536 | INFO     | [monitor] control thread has ended
[2026-04-18 11:52:19] 2026-04-18 15:52:19,648 [wrapper] ==== pilot stdout END ====
[2026-04-18 11:52:19] 2026-04-18 15:52:19,651 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 11:52:19] 2026-04-18 15:52:19,653 [wrapper] pilotpid: 13795
[2026-04-18 11:52:19] 2026-04-18 15:52:19,656 [wrapper] Pilot exit status: 0
[2026-04-18 11:52:19] 2026-04-18 15:52:19,666 [wrapper] pandaids: 7086995132
[2026-04-18 11:52:19] 2026-04-18 15:52:19,703 [wrapper] cleanup supervisor_pilot 26186 13796
[2026-04-18 11:52:19] 2026-04-18 15:52:19,706 [wrapper] Test setup, not cleaning
[2026-04-18 11:52:19] 2026-04-18 15:52:19,708 [wrapper] apfmon messages muted
[2026-04-18 11:52:19] 2026-04-18 15:52:19,710 [wrapper] ==== wrapper stdout END ====
[2026-04-18 11:52:19] 2026-04-18 15:52:19,713 [wrapper] ==== wrapper stderr END ====
[2026-04-18 11:52:19]  *** Error codes and diagnostics ***
[2026-04-18 11:52:19]     "exeErrorCode": 0,
[2026-04-18 11:52:19]     "pilotErrorCode": 0,
[2026-04-18 11:52:19]  *** Listing of results directory ***
[2026-04-18 11:52:19] total 411872
[2026-04-18 11:52:19] -rwx------ 1 boincer umatlas     36322 Apr 18 05:50 runpilot2-wrapper.sh
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 06:05 pilot3.tar.gz
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 06:05 queuedata.json
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas       100 Apr 18 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 11:52:19] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 09:02 run_atlas
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas       105 Apr 18 09:02 job.xml
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas 222706800 Apr 18 09:02 EVNT.49263189._001050.pool.root.1
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 09:02 start_atlas.sh
[2026-04-18 11:52:19] drwxrwx--x 2 boincer umatlas      4096 Apr 18 09:02 shared
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas    656930 Apr 18 09:02 input.tar.gz
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas         0 Apr 18 09:02 boinc_lockfile
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 09:02 pandaJob.out
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas        57 Apr 18 09:02 setup.sh.local
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas    997965 Apr 18 09:02 agis_schedconf.cvmfs.json
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas   1512404 Apr 18 09:02 agis_ddmendpoints.agis.ALL.json
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas       435 Apr 18 09:02 workernode_map.json
[2026-04-18 11:52:19] drwx------ 5 boincer umatlas      4096 Apr 18 09:02 pilot3
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 11:49 init_data.xml
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas 192382026 Apr 18 11:51 HITS.49263191._046716.pool.root.1
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas       489 Apr 18 11:51 boinc_task_state.xml
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas      1056 Apr 18 11:51 memory_monitor_summary.json
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas    354263 Apr 18 11:51 log.49263191._046716.job.log.tgz.1
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas      6438 Apr 18 11:51 heartbeat_new.json
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas      6329 Apr 18 11:51 heartbeat.json
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas        95 Apr 18 11:51 pilot_heartbeat.json
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas        28 Apr 18 11:52 wrapper_checkpoint.txt
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 11:52 boinc_mmap_file
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas       820 Apr 18 11:52 pilotlog.txt
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas    952309 Apr 18 11:52 log.49263191._046716.job.log.1
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas       357 Apr 18 11:52 output.list
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas       410 Apr 18 11:52 runtime_log
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas   1320960 Apr 18 11:52 result.tar.gz
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas      8964 Apr 18 11:52 runtime_log.err
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas       661 Apr 18 11:52 53e6d0013968.diag
[2026-04-18 11:52:19] -rw-r--r-- 1 boincer umatlas     21330 Apr 18 11:52 stderr.txt
[2026-04-18 11:52:19] HITS file was successfully produced:
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas 192382026 Apr 18 11:51 shared/HITS.pool.root.1
[2026-04-18 11:52:19]  *** Contents of shared directory: ***
[2026-04-18 11:52:19] total 407320
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas 222706800 Apr 18 09:02 ATLAS.root_0
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 09:02 start_atlas.sh
[2026-04-18 11:52:19] -rw-r--r-- 2 boincer umatlas    656930 Apr 18 09:02 input.tar.gz
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas 192382026 Apr 18 11:51 HITS.pool.root.1
[2026-04-18 11:52:19] -rw------- 1 boincer umatlas   1320960 Apr 18 11:52 result.tar.gz
11:52:21 (9838): run_atlas exited; CPU time 76547.075995
11:52:21 (9838): called boinc_finish(0)

</stderr_txt>
]]>

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