Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:15 (1858342): wrapper (7.7.26015): starting
17:06:15 (1858342): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 17:06:15] Arguments: --nthreads 4
[2026-04-20 17:06:15] Threads: 4
[2026-04-20 17:06:15] Checking for CVMFS
[2026-04-20 17:06:15] No cvmfs_config command found, will try listing directly
[2026-04-20 17:06:15] CVMFS is ok
[2026-04-20 17:06:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 17:06:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 17:06:15] Further information can be found at the LHC@home message board.
[2026-04-20 17:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 17:06:15] Checking for apptainer binary...
[2026-04-20 17:06:15] which: no apptainer in ((null))
[2026-04-20 17:06:15] apptainer is not installed, using version from CVMFS
[2026-04-20 17:06:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 17:06:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-20 17:06:15] apptainer works
[2026-04-20 17:06:15] Set ATHENA_PROC_NUMBER=4
[2026-04-20 17:06:15] Set ATHENA_CORE_NUMBER=4
[2026-04-20 17:06:15] Starting ATLAS job with PandaID=7088536227
[2026-04-20 17:06:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 19:55:50]  *** The last 200 lines of the pilot log: ***
[2026-04-20 19:55:50] 2026-04-20 17:53:03,885 | INFO     | job 7088536227 has state=finished
[2026-04-20 19:55:50] 2026-04-20 17:53:03,886 | INFO     | preparing for final server update for job 7088536227 in state='finished'
[2026-04-20 19:55:50] 2026-04-20 17:53:04,319 | INFO     | monitor loop #680: job 0:7088536227 is in state 'finished'
[2026-04-20 19:55:50] 2026-04-20 17:53:04,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,558 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,558 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/4/PanDA_Pilot-7088536227/jobReport.json
[2026-04-20 19:55:50] 2026-04-20 17:53:04,561 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/4/workernode_map.json
[2026-04-20 19:55:50] 2026-04-20 17:53:04,561 | INFO     | this job has now completed (state=finished)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,561 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,562 | INFO     | log transfer has been attempted: DONE
[2026-04-20 19:55:50] 2026-04-20 17:53:04,562 | INFO     | job 7088536227 has finished - writing final server update
[2026-04-20 19:55:50] 2026-04-20 17:53:04,562 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8968/.job.ad'
[2026-04-20 19:55:50] 2026-04-20 17:53:04,562 | INFO     | total number of processed events: 400 (read)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,588 | INFO     | using path: /var/lib/boinc/var/slot52/slots/4/PanDA_Pilot-7088536227/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,588 | INFO     | extracted standard info from prmon json
[2026-04-20 19:55:50] 2026-04-20 17:53:04,588 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 19:55:50] 2026-04-20 17:53:04,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 19:55:50] 2026-04-20 17:53:04,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 19:55:50] 2026-04-20 17:53:04,592 | INFO     | fitting pss+swap vs Time
[2026-04-20 19:55:50] 2026-04-20 17:53:04,593 | INFO     | sum of square deviations: 1342841922.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,594 | INFO     | sum of deviations: 23197296000.999996
[2026-04-20 19:55:50] 2026-04-20 17:53:04,594 | INFO     | mean x (centered): 0.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,594 | INFO     | mean y: 2309550.1963190185
[2026-04-20 19:55:50] 2026-04-20 17:53:04,594 | INFO     | intersect: 2309550.1963190185
[2026-04-20 19:55:50] 2026-04-20 17:53:04,594 | INFO     | chi2: 1.4282477141463361
[2026-04-20 19:55:50] 2026-04-20 17:53:04,595 | INFO     | sum of square deviations: 1223016419.5
[2026-04-20 19:55:50] 2026-04-20 17:53:04,596 | INFO     | sum of deviations: 22354471353.5
[2026-04-20 19:55:50] 2026-04-20 17:53:04,596 | INFO     | mean x (centered): 0.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,596 | INFO     | mean y: 2308477.1835443038
[2026-04-20 19:55:50] 2026-04-20 17:53:04,596 | INFO     | intersect: 2308477.1835443038
[2026-04-20 19:55:50] 2026-04-20 17:53:04,596 | INFO     | chi2: 1.4293882413531895
[2026-04-20 19:55:50] 2026-04-20 17:53:04,597 | INFO     | current chi2=1.4293882413531895 (change=-0.07985499963044708 %)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,597 | INFO     | right removable region: 157
[2026-04-20 19:55:50] 2026-04-20 17:53:04,597 | INFO     | sum of square deviations: 1223016419.5
[2026-04-20 19:55:50] 2026-04-20 17:53:04,598 | INFO     | sum of deviations: 141810237.9999999
[2026-04-20 19:55:50] 2026-04-20 17:53:04,601 | INFO     | mean x (centered): 0.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,601 | INFO     | mean y: 2338485.4683544305
[2026-04-20 19:55:50] 2026-04-20 17:53:04,601 | INFO     | intersect: 2338485.4683544305
[2026-04-20 19:55:50] 2026-04-20 17:53:04,602 | INFO     | chi2: 0.0035027528264763965
[2026-04-20 19:55:50] 2026-04-20 17:53:04,602 | INFO     | current chi2=0.0035027528264763965 (change=99.75475172886449 %)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,602 | INFO     | sum of square deviations: 1110539892.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,603 | INFO     | sum of deviations: 176024039.9999998
[2026-04-20 19:55:50] 2026-04-20 17:53:04,603 | INFO     | mean x (centered): 0.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,603 | INFO     | mean y: 2338427.732026144
[2026-04-20 19:55:50] 2026-04-20 17:53:04,604 | INFO     | intersect: 2338427.732026144
[2026-04-20 19:55:50] 2026-04-20 17:53:04,604 | INFO     | chi2: 0.003079843068127538
[2026-04-20 19:55:50] 2026-04-20 17:53:04,604 | INFO     | current chi2=0.003079843068127538 (change=12.073639771330532 %)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,604 | INFO     | left removable region: 10
[2026-04-20 19:55:50] 2026-04-20 17:53:04,604 | INFO     | sum of square deviations: 984941258.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,605 | INFO     | sum of deviations: 34808552.00000025
[2026-04-20 19:55:50] 2026-04-20 17:53:04,605 | INFO     | mean x (centered): 0.0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,605 | INFO     | mean y: 2338221.8163265307
[2026-04-20 19:55:50] 2026-04-20 17:53:04,606 | INFO     | intersect: 2338221.8163265307
[2026-04-20 19:55:50] 2026-04-20 17:53:04,606 | INFO     | chi2: 0.0030548852913298984
[2026-04-20 19:55:50] 2026-04-20 17:53:04,606 | INFO     | current memory leak: 0.04 B/s (using 147 data points, chi2=0.00)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | could have reported an average CPU frequency of 2662 MHz (9 samples)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | ..............................
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | . Timing measurements:
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | . get job = 0 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | . initial setup = 9 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | . payload setup = 16 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,607 | INFO     | . stage-in = 0 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,608 | INFO     | . payload execution = 9948 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,608 | INFO     | . stage-out = 0 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,608 | INFO     | . log creation = 0 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,608 | INFO     | ..............................
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | 
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | job summary report
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | --------------------------------------------------
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | PanDA job id: 7088536227
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | task id: 49263200
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | errors: (none)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,742 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | pilot state: finished 
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | transexitcode: 0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | exeerrorcode: 0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | exeerrordiag: 
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | exitcode: 0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | exitmsg: OK
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | cpuconsumptiontime: 37865 s
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | nevents: 400
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | neventsw: 0
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | pid: 1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:04,743 | INFO     | pgrp: 1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | corecount: 4
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | event service: False
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | sizes: {0: 2281594, 1: 2283479, 12: 2283479, 9969: 2312607, 9971: 2321627, 9972: 2321683, 9973: 2322069}
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | --------------------------------------------------
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | 
[2026-04-20 19:55:50] 2026-04-20 17:53:04,744 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/4
[2026-04-20 19:55:50] 2026-04-20 17:53:04,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 19:55:50] 2026-04-20 17:53:04,781 | INFO     | job 7088536227 has completed (purged errors)
[2026-04-20 19:55:50] 2026-04-20 17:53:04,781 | INFO     | overall cleanup function is called
[2026-04-20 19:55:50] 2026-04-20 17:53:05,790 | INFO     | --- collectZombieJob: --- 10, [1875545]
[2026-04-20 19:55:50] 2026-04-20 17:53:05,791 | INFO     | zombie collector waiting for pid 1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:05,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 19:55:50] 2026-04-20 17:53:05,791 | INFO     | collected zombie processes
[2026-04-20 19:55:50] 2026-04-20 17:53:05,791 | INFO     | will attempt to kill all subprocesses of pid=1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:06,657 | INFO     | process IDs to be killed: [1875545] (in reverse order)
[2026-04-20 19:55:50] 2026-04-20 17:53:07,003 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 19:55:50] 2026-04-20 17:53:07,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 19:55:50] 2026-04-20 17:53:07,036 | INFO     | did not find any defunct processes belonging to 1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:07,068 | INFO     | did not find any defunct processes belonging to 1875545
[2026-04-20 19:55:50] 2026-04-20 17:53:07,069 | INFO     | Ready for new job
[2026-04-20 19:55:50] 2026-04-20 17:53:07,072 | INFO     | **************************************
[2026-04-20 19:55:50] 2026-04-20 17:53:07,072 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 19:55:50] 2026-04-20 17:53:07,072 | INFO     | **************************************
[2026-04-20 19:55:50] 2026-04-20 17:53:07,072 | INFO     | 
[2026-04-20 19:55:50] 2026-04-20 17:53:07,081 | INFO     | architecture information:
[2026-04-20 19:55:50] 2026-04-20 17:53:07,082 | INFO     | executing command: cat /etc/os-release
[2026-04-20 19:55:50] 2026-04-20 17:53:07,109 | INFO     | cat /etc/os-release:
[2026-04-20 19:55:50] NAME="CentOS Linux"
[2026-04-20 19:55:50] VERSION="7 (Core)"
[2026-04-20 19:55:50] ID="centos"
[2026-04-20 19:55:50] ID_LIKE="rhel fedora"
[2026-04-20 19:55:50] VERSION_ID="7"
[2026-04-20 19:55:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 19:55:50] ANSI_COLOR="0;31"
[2026-04-20 19:55:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 19:55:50] HOME_URL="https://www.centos.org/"
[2026-04-20 19:55:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 19:55:50] 
[2026-04-20 19:55:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 19:55:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 19:55:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 19:55:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 19:55:50] 
[2026-04-20 19:55:50] 2026-04-20 17:53:07,110 | INFO     | **************************************
[2026-04-20 19:55:50] 2026-04-20 17:53:07,612 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/4
[2026-04-20 19:55:50] 2026-04-20 17:53:07,637 | INFO     | sufficient remaining disk space (206777090048 B)
[2026-04-20 19:55:50] 2026-04-20 17:53:07,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 19:55:50] 2026-04-20 17:53:07,638 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 19:55:50] 2026-04-20 17:53:07,638 | INFO     | update_server=False
[2026-04-20 19:55:50] 2026-04-20 17:53:07,638 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 19:55:50] 2026-04-20 17:53:07,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:55:50] 2026-04-20 17:53:07,827 | INFO     | aborting loop
[2026-04-20 19:55:50] 2026-04-20 17:53:08,030 | INFO     | all data control threads have been joined
[2026-04-20 19:55:50] 2026-04-20 17:53:08,368 | INFO     | all payload control threads have been joined
[2026-04-20 19:55:50] 2026-04-20 17:53:08,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 19:55:50] 2026-04-20 17:53:08,644 | INFO     | [job] retrieve thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:08,832 | INFO     | [job] job monitor thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:08,895 | INFO     | [job] validate thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,033 | INFO     | [data] control thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,036 | INFO     | all job control threads have been joined
[2026-04-20 19:55:50] 2026-04-20 17:53:09,106 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,107 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,346 | INFO     | [payload] failed_post thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,373 | INFO     | [payload] control thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,462 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:55:50] 2026-04-20 17:53:09,810 | INFO     | [payload] validate_post thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 19:55:50] 2026-04-20 17:53:09,894 | INFO     | [data] copytool_in thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:09,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:10,041 | INFO     | [job] control thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:10,475 | INFO     | [data] copytool_out thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:10,726 | INFO     | [job] queue monitor thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:13,896 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 19:55:50] 2026-04-20 17:53:37,357 | INFO     | PID=1865054 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 19:55:50] 2026-04-20 17:53:37,358 | INFO     | .. there are 21 such processes running
[2026-04-20 19:55:50] 2026-04-20 17:53:37,361 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 19:55:50] 2026-04-20 17:53:37,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 19:55:50] 2026-04-20 17:53:37,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 19:55:50] 2026-04-20 17:53:56,220 | INFO     | [monitor] cgroup control has ended
[2026-04-20 19:55:50] 2026-04-20 17:53:57,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22808204601152)>', '<ExcThread(monitor, started 22807961671424)>']
[2026-04-20 19:55:50] 2026-04-20 17:53:57,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 19:55:50] 2026-04-20 17:53:57,462 | INFO     | [monitor] control thread has ended
[2026-04-20 19:55:50] 2026-04-20 17:54:02,251 | INFO     | all workflow threads have been joined
[2026-04-20 19:55:50] 2026-04-20 17:54:02,251 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 19:55:50] 2026-04-20 17:54:02,251 | INFO     | traces error code: 0
[2026-04-20 19:55:50] 2026-04-20 17:54:02,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 19:55:50] 2026-04-20 17:54:02,493 [wrapper] ==== pilot stdout END ====
[2026-04-20 19:55:50] 2026-04-20 17:54:02,498 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 19:55:50] 2026-04-20 17:54:02,502 [wrapper] pilotpid: 1865054
[2026-04-20 19:55:50] 2026-04-20 17:54:02,506 [wrapper] Pilot exit status: 0
[2026-04-20 19:55:50] 2026-04-20 17:54:02,523 [wrapper] pandaids: 7088536227
[2026-04-20 19:55:50] 2026-04-20 17:54:02,740 [wrapper] cleanup supervisor_pilot 2279957 1865055
[2026-04-20 19:55:50] 2026-04-20 17:54:02,745 [wrapper] Test setup, not cleaning
[2026-04-20 19:55:50] 2026-04-20 17:54:02,748 [wrapper] apfmon messages muted
[2026-04-20 19:55:50] 2026-04-20 17:54:02,751 [wrapper] ==== wrapper stdout END ====
[2026-04-20 19:55:50] 2026-04-20 17:54:02,755 [wrapper] ==== wrapper stderr END ====
[2026-04-20 19:55:50]  *** Error codes and diagnostics ***
[2026-04-20 19:55:50]     "exeErrorCode": 0,
[2026-04-20 19:55:50]     "pilotErrorCode": 0,
[2026-04-20 19:55:50]  *** Listing of results directory ***
[2026-04-20 19:55:50] total 413980
[2026-04-20 19:55:50] -rwx------. 1 boinc boinc     36322 Apr 18 11:48 runpilot2-wrapper.sh
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc    644190 Apr 18 12:05 pilot3.tar.gz
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc      5094 Apr 18 12:05 queuedata.json
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc       100 Apr 20 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 19:55:50] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 17:06 run_atlas
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc       105 Apr 20 17:06 job.xml
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc      6539 Apr 20 17:06 init_data.xml
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc 223482631 Apr 20 17:06 EVNT.49263198._001533.pool.root.1
[2026-04-20 19:55:50] drwxrwx--x. 2 boinc boinc      4096 Apr 20 17:06 shared
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc    656929 Apr 20 17:06 input.tar.gz
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc     15665 Apr 20 17:06 start_atlas.sh
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc         0 Apr 20 17:06 boinc_lockfile
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc      2576 Apr 20 17:06 pandaJob.out
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc    997272 Apr 20 17:06 agis_schedconf.cvmfs.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc   1512404 Apr 20 17:06 agis_ddmendpoints.agis.ALL.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc       436 Apr 20 17:06 workernode_map.json
[2026-04-20 19:55:50] drwx------. 5 boinc boinc      4096 Apr 20 17:06 pilot3
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc 193909619 Apr 20 19:52 HITS.49263200._056465.pool.root.1
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc       487 Apr 20 19:52 boinc_task_state.xml
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc      1027 Apr 20 19:52 memory_monitor_summary.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc    305987 Apr 20 19:53 log.49263200._056465.job.log.tgz.1
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc      6362 Apr 20 19:53 heartbeat_new.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc      6253 Apr 20 19:53 heartbeat.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc        95 Apr 20 19:53 pilot_heartbeat.json
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc      4829 Apr 20 19:54 pilotlog.txt
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc    925129 Apr 20 19:54 log.49263200._056465.job.log.1
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc       357 Apr 20 19:54 output.list
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc       410 Apr 20 19:54 runtime_log
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc   1249280 Apr 20 19:54 result.tar.gz
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc      8827 Apr 20 19:54 runtime_log.err
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc       665 Apr 20 19:54 535f33a39653.diag
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc        27 Apr 20 19:55 wrapper_checkpoint.txt
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc      8192 Apr 20 19:55 boinc_mmap_file
[2026-04-20 19:55:50] -rw-r--r--. 1 boinc boinc     21091 Apr 20 19:55 stderr.txt
[2026-04-20 19:55:50] HITS file was successfully produced:
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc 193909619 Apr 20 19:52 shared/HITS.pool.root.1
[2026-04-20 19:55:50]  *** Contents of shared directory: ***
[2026-04-20 19:55:50] total 409504
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc 223482631 Apr 20 17:06 ATLAS.root_0
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc    656929 Apr 20 17:06 input.tar.gz
[2026-04-20 19:55:50] -rw-r--r--. 2 boinc boinc     15665 Apr 20 17:06 start_atlas.sh
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc 193909619 Apr 20 19:52 HITS.pool.root.1
[2026-04-20 19:55:50] -rw-------. 1 boinc boinc   1249280 Apr 20 19:54 result.tar.gz
19:55:51 (1858342): run_atlas exited; CPU time 38518.175674
19:55:51 (1858342): called boinc_finish(0)

</stderr_txt>
]]>

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