Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:43:09 (8885): wrapper (7.7.26015): starting
06:43:09 (8885): wrapper: running run_atlas (--nthreads 8)
[2026-04-19 06:43:09] Arguments: --nthreads 8
[2026-04-19 06:43:09] Threads: 8
[2026-04-19 06:43:09] Checking for CVMFS
[2026-04-19 06:43:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 06:43:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 06:43:10] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 06:43:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 06:43:12] 2.11.2.0 19231 5034 98248 158608 0 54 22777412 25165824 1060 130560 0 809468 99.874 462773 5626 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-19 06:43:12] CVMFS is ok
[2026-04-19 06:43:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 06:43:12] Checking for apptainer binary...
[2026-04-19 06:43:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 06:43:12] Running /usr/bin/apptainer --version
[2026-04-19 06:43:12] apptainer version 1.3.2-1.el7
[2026-04-19 06:43:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 06:43:27] cg-vwn362.simple-grid.lan
[2026-04-19 06:43:27] apptainer works
[2026-04-19 06:43:27] Set ATHENA_PROC_NUMBER=8
[2026-04-19 06:43:27] Set ATHENA_CORE_NUMBER=8
[2026-04-19 06:43:27] Starting ATLAS job with PandaID=7098282323
[2026-04-19 06:43:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 09:58:51]  *** The last 200 lines of the pilot log: ***
[2026-04-19 09:58:51] 2026-04-19 07:58:01,046 | INFO     | this job has now completed (state=finished)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,046 | INFO     | log transfer has been attempted: DONE
[2026-04-19 09:58:51] 2026-04-19 07:58:01,046 | INFO     | job 7098282323 has finished - writing final server update
[2026-04-19 09:58:51] 2026-04-19 07:58:01,047 | INFO     | total number of processed events: 400 (read)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,049 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7098282323/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,050 | INFO     | extracted standard info from prmon json
[2026-04-19 09:58:51] 2026-04-19 07:58:01,050 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 09:58:51] 2026-04-19 07:58:01,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 09:58:51] 2026-04-19 07:58:01,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 09:58:51] 2026-04-19 07:58:01,055 | INFO     | fitting pss+swap vs Time
[2026-04-19 09:58:51] 2026-04-19 07:58:01,055 | INFO     | sum of square deviations: 1838657730.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,057 | INFO     | sum of deviations: 87763606223.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,057 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,057 | INFO     | mean y: 2414257.5635359115
[2026-04-19 09:58:51] 2026-04-19 07:58:01,057 | INFO     | intersect: 2414257.5635359115
[2026-04-19 09:58:51] 2026-04-19 07:58:01,057 | INFO     | chi2: 7.825919523071271
[2026-04-19 09:58:51] 2026-04-19 07:58:01,058 | INFO     | sum of square deviations: 1690450300.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,059 | INFO     | sum of deviations: 96928274405.00003
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | mean y: 2423408.977272727
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | intersect: 2423408.977272727
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | chi2: 7.144036246598677
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | current chi2=7.144036246598677 (change=8.713139388443253 %)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,060 | INFO     | right removable region: 175
[2026-04-19 09:58:51] 2026-04-19 07:58:01,061 | INFO     | sum of square deviations: 1690450300.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,062 | INFO     | sum of deviations: 24316828330.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,067 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,067 | INFO     | mean y: 2479501.590909091
[2026-04-19 09:58:51] 2026-04-19 07:58:01,067 | INFO     | intersect: 2479501.590909091
[2026-04-19 09:58:51] 2026-04-19 07:58:01,067 | INFO     | chi2: 2.6007051381295594
[2026-04-19 09:58:51] 2026-04-19 07:58:01,068 | INFO     | current chi2=2.6007051381295594 (change=66.76805670614773 %)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,068 | INFO     | sum of square deviations: 1550429070.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,069 | INFO     | sum of deviations: -11673277932.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,070 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,070 | INFO     | mean y: 2518478.7192982454
[2026-04-19 09:58:51] 2026-04-19 07:58:01,070 | INFO     | intersect: 2518478.7192982454
[2026-04-19 09:58:51] 2026-04-19 07:58:01,070 | INFO     | chi2: 0.8847152740287801
[2026-04-19 09:58:51] 2026-04-19 07:58:01,070 | INFO     | current chi2=0.8847152740287801 (change=65.9817154564061 %)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,071 | INFO     | sum of square deviations: 1418361477.5
[2026-04-19 09:58:51] 2026-04-19 07:58:01,072 | INFO     | sum of deviations: -11485973832.999998
[2026-04-19 09:58:51] 2026-04-19 07:58:01,072 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,072 | INFO     | mean y: 2518165.0843373495
[2026-04-19 09:58:51] 2026-04-19 07:58:01,073 | INFO     | intersect: 2518165.0843373495
[2026-04-19 09:58:51] 2026-04-19 07:58:01,073 | INFO     | chi2: 0.8530434480234803
[2026-04-19 09:58:51] 2026-04-19 07:58:01,073 | INFO     | current chi2=0.8530434480234803 (change=3.5798891389174248 %)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,073 | INFO     | left removable region: 15
[2026-04-19 09:58:51] 2026-04-19 07:58:01,074 | INFO     | sum of square deviations: 1270051720.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,075 | INFO     | sum of deviations: -464208963.0000008
[2026-04-19 09:58:51] 2026-04-19 07:58:01,075 | INFO     | mean x (centered): 0.0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,075 | INFO     | mean y: 2531349.6625
[2026-04-19 09:58:51] 2026-04-19 07:58:01,075 | INFO     | intersect: 2531349.6625
[2026-04-19 09:58:51] 2026-04-19 07:58:01,076 | INFO     | chi2: 0.05850992039593906
[2026-04-19 09:58:51] 2026-04-19 07:58:01,076 | INFO     | current memory leak: -0.37 B/s (using 160 data points, chi2=0.06)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,076 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | ..............................
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . Timing measurements:
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . get job = 0 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . initial setup = 113 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . payload setup = 164 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . stage-in = 0 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,077 | INFO     | . payload execution = 11132 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,078 | INFO     | . stage-out = 4 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,078 | INFO     | . log creation = 1 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,078 | INFO     | ..............................
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | 
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | job summary report
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | --------------------------------------------------
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | PanDA job id: 7098282323
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | task id: 49545114
[2026-04-19 09:58:51] 2026-04-19 07:58:01,235 | INFO     | errors: (none)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | pilot state: finished 
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | transexitcode: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | exeerrorcode: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | exeerrordiag: 
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | exitcode: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | exitmsg: OK
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | cpuconsumptiontime: 55945 s
[2026-04-19 09:58:51] 2026-04-19 07:58:01,236 | INFO     | nevents: 400
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | neventsw: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | pid: 17471
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | pgrp: 17471
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | corecount: 8
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | event service: False
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | sizes: {0: 2281023, 1: 2281708, 2: 2283537, 12: 2283537, 11300: 2312832, 11301: 2312831, 11305: 2322069, 11307: 2322207}
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | --------------------------------------------------
[2026-04-19 09:58:51] 2026-04-19 07:58:01,237 | INFO     | 
[2026-04-19 09:58:51] 2026-04-19 07:58:01,238 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-04-19 09:58:51] 2026-04-19 07:58:01,875 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,878 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,878 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 09:58:51] 2026-04-19 07:58:01,878 | INFO     | job 7098282323 has completed (purged errors)
[2026-04-19 09:58:51] 2026-04-19 07:58:01,878 | INFO     | overall cleanup function is called
[2026-04-19 09:58:51] 2026-04-19 07:58:02,887 | INFO     | --- collectZombieJob: --- 10, [17471]
[2026-04-19 09:58:51] 2026-04-19 07:58:02,887 | INFO     | zombie collector waiting for pid 17471
[2026-04-19 09:58:51] 2026-04-19 07:58:02,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 09:58:51] 2026-04-19 07:58:02,887 | INFO     | collected zombie processes
[2026-04-19 09:58:51] 2026-04-19 07:58:02,887 | INFO     | will attempt to kill all subprocesses of pid=17471
[2026-04-19 09:58:51] 2026-04-19 07:58:02,982 | INFO     | process IDs to be killed: [17471] (in reverse order)
[2026-04-19 09:58:51] 2026-04-19 07:58:04,006 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 09:58:51] 2026-04-19 07:58:04,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 09:58:51] 2026-04-19 07:58:04,009 | INFO     | did not find any defunct processes belonging to 17471
[2026-04-19 09:58:51] 2026-04-19 07:58:04,010 | INFO     | did not find any defunct processes belonging to 17471
[2026-04-19 09:58:51] 2026-04-19 07:58:04,011 | INFO     | Ready for new job
[2026-04-19 09:58:51] 2026-04-19 07:58:04,012 | INFO     | **************************************
[2026-04-19 09:58:51] 2026-04-19 07:58:04,013 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 09:58:51] 2026-04-19 07:58:04,013 | INFO     | **************************************
[2026-04-19 09:58:51] 2026-04-19 07:58:04,013 | INFO     | 
[2026-04-19 09:58:51] 2026-04-19 07:58:04,013 | INFO     | pilot is running in a VM
[2026-04-19 09:58:51] 2026-04-19 07:58:04,014 | INFO     | architecture information:
[2026-04-19 09:58:51] 2026-04-19 07:58:04,021 | INFO     | executing command: cat /etc/os-release
[2026-04-19 09:58:51] 2026-04-19 07:58:04,313 | INFO     | cat /etc/os-release:
[2026-04-19 09:58:51] NAME="CentOS Linux"
[2026-04-19 09:58:51] VERSION="7 (Core)"
[2026-04-19 09:58:51] ID="centos"
[2026-04-19 09:58:51] ID_LIKE="rhel fedora"
[2026-04-19 09:58:51] VERSION_ID="7"
[2026-04-19 09:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 09:58:51] ANSI_COLOR="0;31"
[2026-04-19 09:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 09:58:51] HOME_URL="https://www.centos.org/"
[2026-04-19 09:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 09:58:51] 
[2026-04-19 09:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 09:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 09:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 09:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 09:58:51] 
[2026-04-19 09:58:51] 2026-04-19 07:58:04,314 | INFO     | **************************************
[2026-04-19 09:58:51] 2026-04-19 07:58:04,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-04-19 09:58:51] 2026-04-19 07:58:05,077 | INFO     | sufficient remaining disk space (495077818368 B)
[2026-04-19 09:58:51] 2026-04-19 07:58:05,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 09:58:51] 2026-04-19 07:58:05,077 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 09:58:51] 2026-04-19 07:58:05,077 | INFO     | update_server=False
[2026-04-19 09:58:51] 2026-04-19 07:58:05,078 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 09:58:51] 2026-04-19 07:58:05,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 09:58:51] 2026-04-19 07:58:05,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:58:51] 2026-04-19 07:58:05,261 | INFO     | aborting loop
[2026-04-19 09:58:51] 2026-04-19 07:58:05,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 09:58:51] 2026-04-19 07:58:05,761 | INFO     | all job control threads have been joined
[2026-04-19 09:58:51] 2026-04-19 07:58:05,880 | INFO     | all data control threads have been joined
[2026-04-19 09:58:51] 2026-04-19 07:58:06,084 | INFO     | [job] retrieve thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,107 | INFO     | [data] copytool_in thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 09:58:51] 2026-04-19 07:58:06,261 | INFO     | [job] validate thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,267 | INFO     | [job] job monitor thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,295 | INFO     | all payload control threads have been joined
[2026-04-19 09:58:51] 2026-04-19 07:58:06,767 | INFO     | [job] control thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,774 | INFO     | [payload] validate_post thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,886 | INFO     | [data] control thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:06,983 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,025 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,093 | INFO     | [data] copytool_out thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,256 | INFO     | [job] queue monitor thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,301 | INFO     | [payload] control thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,459 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:07,678 | INFO     | [payload] failed_post thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:09,294 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 09:58:51] 2026-04-19 07:58:33,124 | INFO     | PID=12853 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-19 09:58:51] 2026-04-19 07:58:33,125 | INFO     | .. there are 2 such processes running
[2026-04-19 09:58:51] 2026-04-19 07:58:33,125 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 09:58:51] 2026-04-19 07:58:33,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 09:58:51] 2026-04-19 07:58:33,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 09:58:51] 2026-04-19 07:58:40,340 | INFO     | [monitor] cgroup control has ended
[2026-04-19 09:58:51] 2026-04-19 07:58:41,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104811251520)>', '<ExcThread(monitor, started 140104223934208)>']
[2026-04-19 09:58:51] 2026-04-19 07:58:42,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 09:58:51] 2026-04-19 07:58:42,179 | INFO     | [monitor] control thread has ended
[2026-04-19 09:58:51] 2026-04-19 07:58:46,698 | INFO     | all workflow threads have been joined
[2026-04-19 09:58:51] 2026-04-19 07:58:46,698 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 09:58:51] 2026-04-19 07:58:46,698 | INFO     | traces error code: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:46,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 09:58:51] 2026-04-19 07:58:47,071 [wrapper] ==== pilot stdout END ====
[2026-04-19 09:58:51] 2026-04-19 07:58:47,174 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 09:58:51] 2026-04-19 07:58:47,273 [wrapper] pilotpid: 12853
[2026-04-19 09:58:51] 2026-04-19 07:58:47,353 [wrapper] Pilot exit status: 0
[2026-04-19 09:58:51] 2026-04-19 07:58:47,841 [wrapper] pandaids: 7098282323
[2026-04-19 09:58:51] 2026-04-19 07:58:48,878 [wrapper] cleanup supervisor_pilot  6055 12854
[2026-04-19 09:58:51] 2026-04-19 07:58:48,971 [wrapper] Test setup, not cleaning
[2026-04-19 09:58:51] 2026-04-19 07:58:49,088 [wrapper] apfmon messages muted
[2026-04-19 09:58:51] 2026-04-19 07:58:49,210 [wrapper] ==== wrapper stdout END ====
[2026-04-19 09:58:51] 2026-04-19 07:58:49,336 [wrapper] ==== wrapper stderr END ====
[2026-04-19 09:58:51]  *** Error codes and diagnostics ***
[2026-04-19 09:58:51]     "exeErrorCode": 0,
[2026-04-19 09:58:51]     "pilotErrorCode": 0,
[2026-04-19 09:58:51]  *** Listing of results directory ***
[2026-04-19 09:58:51] total 461164
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-19 09:58:51] -rwx------. 1 boinc boinc     36322 Apr 18 11:37 runpilot2-wrapper.sh
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:42 queuedata.json
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc       100 Apr 19 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 09:58:51] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 06:43 run_atlas
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc       105 Apr 19 06:43 job.xml
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc      6306 Apr 19 06:43 init_data.xml
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc 278832463 Apr 19 06:43 EVNT.49539591._000735.pool.root.1
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc     15665 Apr 19 06:43 start_atlas.sh
[2026-04-19 09:58:51] drwxrwx--x. 2 boinc boinc        68 Apr 19 06:43 shared
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc    656941 Apr 19 06:43 input.tar.gz
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc         0 Apr 19 06:43 boinc_lockfile
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc      2606 Apr 19 06:43 pandaJob.out
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc       415 Apr 19 06:49 workernode_map.json
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc    997665 Apr 19 06:49 agis_schedconf.cvmfs.json
[2026-04-19 09:58:51] drwx------. 5 boinc boinc      4096 Apr 19 06:49 pilot3
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc 186496583 Apr 19 09:56 HITS.49545114._031444.pool.root.1
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc       488 Apr 19 09:56 boinc_task_state.xml
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc        95 Apr 19 09:57 pilot_heartbeat.json
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc      1021 Apr 19 09:57 memory_monitor_summary.json
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc   1512404 Apr 19 09:57 agis_ddmendpoints.agis.ALL.json
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc    361575 Apr 19 09:57 log.49545114._031444.job.log.tgz.1
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc      6347 Apr 19 09:58 heartbeat_new.json
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc      6238 Apr 19 09:58 heartbeat.json
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc        28 Apr 19 09:58 wrapper_checkpoint.txt
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc      8192 Apr 19 09:58 boinc_mmap_file
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc      4879 Apr 19 09:58 pilotlog.txt
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc   1065934 Apr 19 09:58 log.49545114._031444.job.log.1
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc       357 Apr 19 09:58 output.list
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc       410 Apr 19 09:58 runtime_log
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc   1443840 Apr 19 09:58 result.tar.gz
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc      8438 Apr 19 09:58 runtime_log.err
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc       655 Apr 19 09:58 50ca9ec2bf6c.diag
[2026-04-19 09:58:51] -rw-r--r--. 1 boinc boinc     20617 Apr 19 09:58 stderr.txt
[2026-04-19 09:58:51] HITS file was successfully produced:
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc 186496583 Apr 19 09:56 shared/HITS.pool.root.1
[2026-04-19 09:58:51]  *** Contents of shared directory: ***
[2026-04-19 09:58:51] total 456500
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc 278832463 Apr 19 06:43 ATLAS.root_0
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc     15665 Apr 19 06:43 start_atlas.sh
[2026-04-19 09:58:51] -rw-r--r--. 2 boinc boinc    656941 Apr 19 06:43 input.tar.gz
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc 186496583 Apr 19 09:56 HITS.pool.root.1
[2026-04-19 09:58:51] -rw-------. 1 boinc boinc   1443840 Apr 19 09:58 result.tar.gz
09:58:52 (8885): run_atlas exited; CPU time 56053.050889
09:58:52 (8885): called boinc_finish(0)

</stderr_txt>
]]>

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