Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:31 (3640900): wrapper (7.7.26015): starting
20:23:31 (3640900): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 20:23:31] Arguments: --nthreads 4
[2026-04-19 20:23:31] Threads: 4
[2026-04-19 20:23:31] Checking for CVMFS
[2026-04-19 20:23:31] No cvmfs_config command found, will try listing directly
[2026-04-19 20:23:31] CVMFS is ok
[2026-04-19 20:23:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 20:23:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 20:23:31] Further information can be found at the LHC@home message board.
[2026-04-19 20:23:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 20:23:31] Checking for apptainer binary...
[2026-04-19 20:23:31] which: no apptainer in ((null))
[2026-04-19 20:23:31] apptainer is not installed, using version from CVMFS
[2026-04-19 20:23:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 20:23:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-04-19 20:23:31] apptainer works
[2026-04-19 20:23:31] Set ATHENA_PROC_NUMBER=4
[2026-04-19 20:23:31] Set ATHENA_CORE_NUMBER=4
[2026-04-19 20:23:31] Starting ATLAS job with PandaID=7098078400
[2026-04-19 20:23:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 22:52:33]  *** The last 200 lines of the pilot log: ***
[2026-04-19 22:52:33] 2026-04-19 20:51:15,475 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/0/workernode_map.json
[2026-04-19 22:52:33] 2026-04-19 20:51:15,476 | INFO     | this job has now completed (state=finished)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,476 | INFO     | log transfer has been attempted: DONE
[2026-04-19 22:52:33] 2026-04-19 20:51:15,476 | INFO     | job 7098078400 has finished - writing final server update
[2026-04-19 22:52:33] 2026-04-19 20:51:15,477 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4375/.job.ad'
[2026-04-19 22:52:33] 2026-04-19 20:51:15,477 | INFO     | total number of processed events: 400 (read)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,490 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7098078400/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,491 | INFO     | extracted standard info from prmon json
[2026-04-19 22:52:33] 2026-04-19 20:51:15,491 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 22:52:33] 2026-04-19 20:51:15,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 22:52:33] 2026-04-19 20:51:15,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 22:52:33] 2026-04-19 20:51:15,494 | INFO     | fitting pss+swap vs Time
[2026-04-19 22:52:33] 2026-04-19 20:51:15,495 | INFO     | sum of square deviations: 945282840.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,496 | INFO     | sum of deviations: -32571084078.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,496 | INFO     | mean x (centered): 0.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,496 | INFO     | mean y: 2458044.7586206896
[2026-04-19 22:52:33] 2026-04-19 20:51:15,496 | INFO     | intersect: 2458044.7586206896
[2026-04-19 22:52:33] 2026-04-19 20:51:15,496 | INFO     | chi2: 1.6255724517549095
[2026-04-19 22:52:33] 2026-04-19 20:51:15,497 | INFO     | sum of square deviations: 850825255.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,497 | INFO     | sum of deviations: -30545351334.499985
[2026-04-19 22:52:33] 2026-04-19 20:51:15,497 | INFO     | mean x (centered): 0.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,498 | INFO     | mean y: 2461316.407142857
[2026-04-19 22:52:33] 2026-04-19 20:51:15,498 | INFO     | intersect: 2461316.407142857
[2026-04-19 22:52:33] 2026-04-19 20:51:15,498 | INFO     | chi2: 1.6180550208624422
[2026-04-19 22:52:33] 2026-04-19 20:51:15,498 | INFO     | current chi2=1.6180550208624422 (change=0.4624482215081654 %)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,498 | INFO     | right removable region: 139
[2026-04-19 22:52:33] 2026-04-19 20:51:15,499 | INFO     | sum of square deviations: 850825255.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,499 | INFO     | sum of deviations: -49271956115.50001
[2026-04-19 22:52:33] 2026-04-19 20:51:15,499 | INFO     | mean x (centered): 0.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,500 | INFO     | mean y: 2484397.3214285714
[2026-04-19 22:52:33] 2026-04-19 20:51:15,500 | INFO     | intersect: 2484397.3214285714
[2026-04-19 22:52:33] 2026-04-19 20:51:15,500 | INFO     | chi2: 0.2842379685669096
[2026-04-19 22:52:33] 2026-04-19 20:51:15,500 | INFO     | current chi2=0.2842379685669096 (change=82.51459242803627 %)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,500 | INFO     | sum of square deviations: 762879420.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,501 | INFO     | sum of deviations: -44351846145.00001
[2026-04-19 22:52:33] 2026-04-19 20:51:15,501 | INFO     | mean x (centered): 0.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,501 | INFO     | mean y: 2475858.525925926
[2026-04-19 22:52:33] 2026-04-19 20:51:15,501 | INFO     | intersect: 2475858.525925926
[2026-04-19 22:52:33] 2026-04-19 20:51:15,502 | INFO     | chi2: 0.2841956758578466
[2026-04-19 22:52:33] 2026-04-19 20:51:15,502 | INFO     | current chi2=0.2841956758578466 (change=0.01487933131390173 %)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,502 | INFO     | left removable region: 10
[2026-04-19 22:52:33] 2026-04-19 20:51:15,502 | INFO     | sum of square deviations: 665612480.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,503 | INFO     | sum of deviations: -41645440235.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,503 | INFO     | mean x (centered): 0.0
[2026-04-19 22:52:33] 2026-04-19 20:51:15,503 | INFO     | mean y: 2480953.8759689922
[2026-04-19 22:52:33] 2026-04-19 20:51:15,503 | INFO     | intersect: 2480953.8759689922
[2026-04-19 22:52:33] 2026-04-19 20:51:15,503 | INFO     | chi2: 0.2682110539393677
[2026-04-19 22:52:33] 2026-04-19 20:51:15,504 | INFO     | current memory leak: -62.57 B/s (using 129 data points, chi2=0.27)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,504 | INFO     | could have reported an average CPU frequency of 2719 MHz (8 samples)
[2026-04-19 22:52:33] 2026-04-19 20:51:15,504 | INFO     | ..............................
[2026-04-19 22:52:33] 2026-04-19 20:51:15,504 | INFO     | . Timing measurements:
[2026-04-19 22:52:33] 2026-04-19 20:51:15,504 | INFO     | . get job = 0 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . initial setup = 6 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . payload setup = 10 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . stage-in = 0 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . payload execution = 8820 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . stage-out = 0 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | . log creation = 0 s
[2026-04-19 22:52:33] 2026-04-19 20:51:15,505 | INFO     | ..............................
[2026-04-19 22:52:33] 2026-04-19 20:51:16,021 | INFO     | 
[2026-04-19 22:52:33] 2026-04-19 20:51:16,021 | INFO     | job summary report
[2026-04-19 22:52:33] 2026-04-19 20:51:16,021 | INFO     | --------------------------------------------------
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | PanDA job id: 7098078400
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | task id: 49545114
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | errors: (none)
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | pilot state: finished 
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | transexitcode: 0
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | exeerrorcode: 0
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | exeerrordiag: 
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | exitcode: 0
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | exitmsg: OK
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | cpuconsumptiontime: 34189 s
[2026-04-19 22:52:33] 2026-04-19 20:51:16,022 | INFO     | nevents: 400
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | neventsw: 0
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | pid: 3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | pgrp: 3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | corecount: 4
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | event service: False
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | sizes: {0: 2281585, 1: 2283470, 12: 2283470, 8833: 2311426, 8834: 2320502, 8835: 2320640}
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | --------------------------------------------------
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | 
[2026-04-19 22:52:33] 2026-04-19 20:51:16,023 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-19 22:52:33] 2026-04-19 20:51:16,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,046 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 22:52:33] 2026-04-19 20:51:16,047 | INFO     | job 7098078400 has completed (purged errors)
[2026-04-19 22:52:33] 2026-04-19 20:51:16,047 | INFO     | overall cleanup function is called
[2026-04-19 22:52:33] 2026-04-19 20:51:17,054 | INFO     | --- collectZombieJob: --- 10, [3649932]
[2026-04-19 22:52:33] 2026-04-19 20:51:17,055 | INFO     | zombie collector waiting for pid 3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:17,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 22:52:33] 2026-04-19 20:51:17,055 | INFO     | collected zombie processes
[2026-04-19 22:52:33] 2026-04-19 20:51:17,055 | INFO     | will attempt to kill all subprocesses of pid=3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:17,183 | WARNING  | process 3649932 can no longer be monitored (due to stat problems) - aborting
[2026-04-19 22:52:33] 2026-04-19 20:51:17,908 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 22:52:33] 2026-04-19 20:51:17,960 | INFO     | process IDs to be killed: [3649932] (in reverse order)
[2026-04-19 22:52:33] 2026-04-19 20:51:18,066 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 22:52:33] 2026-04-19 20:51:18,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 22:52:33] 2026-04-19 20:51:18,090 | INFO     | did not find any defunct processes belonging to 3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:18,114 | INFO     | did not find any defunct processes belonging to 3649932
[2026-04-19 22:52:33] 2026-04-19 20:51:18,114 | INFO     | Ready for new job
[2026-04-19 22:52:33] 2026-04-19 20:51:18,116 | INFO     | **************************************
[2026-04-19 22:52:33] 2026-04-19 20:51:18,117 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 22:52:33] 2026-04-19 20:51:18,117 | INFO     | **************************************
[2026-04-19 22:52:33] 2026-04-19 20:51:18,117 | INFO     | 
[2026-04-19 22:52:33] 2026-04-19 20:51:18,122 | INFO     | architecture information:
[2026-04-19 22:52:33] 2026-04-19 20:51:18,122 | INFO     | executing command: cat /etc/os-release
[2026-04-19 22:52:33] 2026-04-19 20:51:18,137 | INFO     | cat /etc/os-release:
[2026-04-19 22:52:33] NAME="CentOS Linux"
[2026-04-19 22:52:33] VERSION="7 (Core)"
[2026-04-19 22:52:33] ID="centos"
[2026-04-19 22:52:33] ID_LIKE="rhel fedora"
[2026-04-19 22:52:33] VERSION_ID="7"
[2026-04-19 22:52:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 22:52:33] ANSI_COLOR="0;31"
[2026-04-19 22:52:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 22:52:33] HOME_URL="https://www.centos.org/"
[2026-04-19 22:52:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 22:52:33] 
[2026-04-19 22:52:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 22:52:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 22:52:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 22:52:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 22:52:33] 
[2026-04-19 22:52:33] 2026-04-19 20:51:18,138 | INFO     | **************************************
[2026-04-19 22:52:33] 2026-04-19 20:51:18,322 | INFO     | number of running child processes to parent process 3649932: 1
[2026-04-19 22:52:33] 2026-04-19 20:51:18,322 | INFO     | maximum number of monitored processes: 6
[2026-04-19 22:52:33] 2026-04-19 20:51:18,323 | INFO     | aborting job monitoring since job object (job id=7098078400) has expired
[2026-04-19 22:52:33] 2026-04-19 20:51:18,641 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-19 22:52:33] 2026-04-19 20:51:18,657 | INFO     | sufficient remaining disk space (33775681536 B)
[2026-04-19 22:52:33] 2026-04-19 20:51:18,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 22:52:33] 2026-04-19 20:51:18,658 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 22:52:33] 2026-04-19 20:51:18,658 | INFO     | update_server=False
[2026-04-19 22:52:33] 2026-04-19 20:51:18,658 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 22:52:33] 2026-04-19 20:51:18,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 22:52:33] 2026-04-19 20:51:18,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:52:33] 2026-04-19 20:51:18,659 | INFO     | will abort loop
[2026-04-19 22:52:33] 2026-04-19 20:51:19,155 | INFO     | all job control threads have been joined
[2026-04-19 22:52:33] 2026-04-19 20:51:19,315 | INFO     | all data control threads have been joined
[2026-04-19 22:52:33] 2026-04-19 20:51:19,664 | INFO     | [job] retrieve thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:19,664 | INFO     | [job] job monitor thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:19,681 | INFO     | all payload control threads have been joined
[2026-04-19 22:52:33] 2026-04-19 20:51:19,933 | INFO     | [payload] validate_post thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,133 | INFO     | [payload] failed_post thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,159 | INFO     | [job] control thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,321 | INFO     | [data] control thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,339 | INFO     | [job] validate thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,540 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 22:52:33] 2026-04-19 20:51:20,665 | INFO     | [data] copytool_out thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,686 | INFO     | [payload] control thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:20,814 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:21,043 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:21,124 | INFO     | [data] copytool_in thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:21,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 22:52:33] 2026-04-19 20:51:21,618 | INFO     | [job] queue monitor thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:25,481 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:29,177 | INFO     | job.realtimelogging is not enabled
[2026-04-19 22:52:33] 2026-04-19 20:51:30,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 22:52:33] 2026-04-19 20:51:49,211 | INFO     | PID=3645037 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 22:52:33] 2026-04-19 20:51:49,211 | INFO     | .. there are 6 such processes running
[2026-04-19 22:52:33] 2026-04-19 20:51:49,211 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 22:52:33] 2026-04-19 20:51:49,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 22:52:33] 2026-04-19 20:51:49,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 22:52:33] 2026-04-19 20:52:02,543 | INFO     | [monitor] cgroup control has ended
[2026-04-19 22:52:33] 2026-04-19 20:52:04,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23164920268608)>', '<ExcThread(monitor, started 23164685141760)>']
[2026-04-19 22:52:33] 2026-04-19 20:52:05,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 22:52:33] 2026-04-19 20:52:05,274 | INFO     | [monitor] control thread has ended
[2026-04-19 22:52:33] 2026-04-19 20:52:09,371 | INFO     | all workflow threads have been joined
[2026-04-19 22:52:33] 2026-04-19 20:52:09,371 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 22:52:33] 2026-04-19 20:52:09,372 | INFO     | traces error code: 0
[2026-04-19 22:52:33] 2026-04-19 20:52:09,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 22:52:33] 2026-04-19 20:52:09,508 [wrapper] ==== pilot stdout END ====
[2026-04-19 22:52:33] 2026-04-19 20:52:09,511 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 22:52:33] 2026-04-19 20:52:09,514 [wrapper] pilotpid: 3645037
[2026-04-19 22:52:33] 2026-04-19 20:52:09,517 [wrapper] Pilot exit status: 0
[2026-04-19 22:52:33] 2026-04-19 20:52:09,527 [wrapper] pandaids: 7098078400
[2026-04-19 22:52:33] 2026-04-19 20:52:09,601 [wrapper] cleanup supervisor_pilot 3738863 3645038
[2026-04-19 22:52:33] 2026-04-19 20:52:09,604 [wrapper] Test setup, not cleaning
[2026-04-19 22:52:33] 2026-04-19 20:52:09,607 [wrapper] apfmon messages muted
[2026-04-19 22:52:33] 2026-04-19 20:52:09,609 [wrapper] ==== wrapper stdout END ====
[2026-04-19 22:52:33] 2026-04-19 20:52:09,611 [wrapper] ==== wrapper stderr END ====
[2026-04-19 22:52:33]  *** Error codes and diagnostics ***
[2026-04-19 22:52:33]     "exeErrorCode": 0,
[2026-04-19 22:52:33]     "pilotErrorCode": 0,
[2026-04-19 22:52:33]  *** Listing of results directory ***
[2026-04-19 22:52:33] total 461260
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-19 22:52:33] -rwx------. 1 boinc boinc     36322 Apr 18 11:25 runpilot2-wrapper.sh
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:42 queuedata.json
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc       100 Apr 19 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 22:52:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 20:23 run_atlas
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc       105 Apr 19 20:23 job.xml
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc 276703680 Apr 19 20:23 EVNT.49539591._000525.pool.root.1
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc      6480 Apr 19 20:23 init_data.xml
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc     15665 Apr 19 20:23 start_atlas.sh
[2026-04-19 22:52:33] drwxrwx--x. 2 boinc boinc      4096 Apr 19 20:23 shared
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc    656942 Apr 19 20:23 input.tar.gz
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc         0 Apr 19 20:23 boinc_lockfile
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc      2606 Apr 19 20:23 pandaJob.out
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc    997729 Apr 19 20:23 agis_schedconf.cvmfs.json
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc   1512404 Apr 19 20:23 agis_ddmendpoints.agis.ALL.json
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc       452 Apr 19 20:23 workernode_map.json
[2026-04-19 22:52:33] drwx------. 5 boinc boinc      4096 Apr 19 20:23 pilot3
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc 189287039 Apr 19 22:50 HITS.49545114._031037.pool.root.1
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc        95 Apr 19 22:51 pilot_heartbeat.json
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc       487 Apr 19 22:51 boinc_task_state.xml
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc      1046 Apr 19 22:51 memory_monitor_summary.json
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc    296177 Apr 19 22:51 log.49545114._031037.job.log.tgz.1
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc      6427 Apr 19 22:51 heartbeat_new.json
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc      6318 Apr 19 22:51 heartbeat.json
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc        27 Apr 19 22:52 wrapper_checkpoint.txt
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc      5189 Apr 19 22:52 pilotlog.txt
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc    840007 Apr 19 22:52 log.49545114._031037.job.log.1
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc       357 Apr 19 22:52 output.list
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc       410 Apr 19 22:52 runtime_log
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc   1157120 Apr 19 22:52 result.tar.gz
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc      8826 Apr 19 22:52 runtime_log.err
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc       662 Apr 19 22:52 4e09ac50c987.diag
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc      8192 Apr 19 22:52 boinc_mmap_file
[2026-04-19 22:52:33] -rw-r--r--. 1 boinc boinc     21036 Apr 19 22:52 stderr.txt
[2026-04-19 22:52:33] HITS file was successfully produced:
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc 189287039 Apr 19 22:50 shared/HITS.pool.root.1
[2026-04-19 22:52:33]  *** Contents of shared directory: ***
[2026-04-19 22:52:33] total 456872
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc 276703680 Apr 19 20:23 ATLAS.root_0
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc     15665 Apr 19 20:23 start_atlas.sh
[2026-04-19 22:52:33] -rw-r--r--. 2 boinc boinc    656942 Apr 19 20:23 input.tar.gz
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc 189287039 Apr 19 22:50 HITS.pool.root.1
[2026-04-19 22:52:33] -rw-------. 1 boinc boinc   1157120 Apr 19 22:52 result.tar.gz
22:52:35 (3640900): run_atlas exited; CPU time 34548.243257
22:52:35 (3640900): called boinc_finish(0)

</stderr_txt>
]]>

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