Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:25:31 (1779656): wrapper (7.7.26015): starting
16:25:31 (1779656): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 16:25:31] Arguments: --nthreads 4
[2026-04-20 16:25:31] Threads: 4
[2026-04-20 16:25:31] Checking for CVMFS
[2026-04-20 16:25:31] No cvmfs_config command found, will try listing directly
[2026-04-20 16:25:31] CVMFS is ok
[2026-04-20 16:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 16:25:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 16:25:31] Further information can be found at the LHC@home message board.
[2026-04-20 16:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 16:25:31] Checking for apptainer binary...
[2026-04-20 16:25:31] which: no apptainer in ((null))
[2026-04-20 16:25:31] apptainer is not installed, using version from CVMFS
[2026-04-20 16:25:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 16:25:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-20 16:25:31] apptainer works
[2026-04-20 16:25:31] Set ATHENA_PROC_NUMBER=4
[2026-04-20 16:25:31] Set ATHENA_CORE_NUMBER=4
[2026-04-20 16:25:31] Starting ATLAS job with PandaID=7098075654
[2026-04-20 16:25:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 19:16:18]  *** The last 200 lines of the pilot log: ***
[2026-04-20 19:16:18] 2026-04-20 17:15:13,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 19:16:18] 2026-04-20 17:15:13,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 19:16:18] 2026-04-20 17:15:13,560 | INFO     | fitting pss+swap vs Time
[2026-04-20 19:16:18] 2026-04-20 17:15:13,561 | INFO     | sum of square deviations: 1418361477.5
[2026-04-20 19:16:18] 2026-04-20 17:15:13,562 | INFO     | sum of deviations: 25151596982.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,562 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,562 | INFO     | mean y: 2318926.1566265062
[2026-04-20 19:16:18] 2026-04-20 17:15:13,562 | INFO     | intersect: 2318926.1566265062
[2026-04-20 19:16:18] 2026-04-20 17:15:13,562 | INFO     | chi2: 1.4215871999342455
[2026-04-20 19:16:18] 2026-04-20 17:15:13,563 | INFO     | sum of square deviations: 1294014960.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | sum of deviations: 24362198055.999996
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | mean y: 2317957.795031056
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | intersect: 2317957.795031056
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | chi2: 1.4223665710851734
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | current chi2=1.4223665710851734 (change=-0.05482401297394235 %)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,564 | INFO     | right removable region: 160
[2026-04-20 19:16:18] 2026-04-20 17:15:13,565 | INFO     | sum of square deviations: 1294014960.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,565 | INFO     | sum of deviations: 1847550309.9999995
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | mean y: 2347115.8074534163
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | intersect: 2347115.8074534163
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | chi2: 0.0032439224441473094
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | current chi2=0.0032439224441473094 (change=99.77180981621828 %)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,566 | INFO     | sum of square deviations: 1177156955.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,567 | INFO     | sum of deviations: 720992732.9999999
[2026-04-20 19:16:18] 2026-04-20 17:15:13,567 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,567 | INFO     | mean y: 2348578.064102564
[2026-04-20 19:16:18] 2026-04-20 17:15:13,567 | INFO     | intersect: 2348578.064102564
[2026-04-20 19:16:18] 2026-04-20 17:15:13,568 | INFO     | chi2: 0.0014398879489800921
[2026-04-20 19:16:18] 2026-04-20 17:15:13,568 | INFO     | current chi2=0.0014398879489800921 (change=55.61275049661128 %)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,568 | INFO     | sum of square deviations: 1067554900.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,569 | INFO     | sum of deviations: 120713631.99999951
[2026-04-20 19:16:18] 2026-04-20 17:15:13,569 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,569 | INFO     | mean y: 2349411.2317880793
[2026-04-20 19:16:18] 2026-04-20 17:15:13,569 | INFO     | intersect: 2349411.2317880793
[2026-04-20 19:16:18] 2026-04-20 17:15:13,570 | INFO     | chi2: 0.0009038223734782868
[2026-04-20 19:16:18] 2026-04-20 17:15:13,570 | INFO     | current chi2=0.0009038223734782868 (change=37.229673036816074 %)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,570 | INFO     | sum of square deviations: 964976232.5
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | sum of deviations: -197033232.99999905
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | mean y: 2349880.3698630137
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | intersect: 2349880.3698630137
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | chi2: 0.0006952703386106445
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | current chi2=0.0006952703386106445 (change=23.074449248810556 %)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,571 | INFO     | left removable region: 20
[2026-04-20 19:16:18] 2026-04-20 17:15:13,572 | INFO     | sum of square deviations: 850825255.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,572 | INFO     | sum of deviations: -204046159.00000003
[2026-04-20 19:16:18] 2026-04-20 17:15:13,572 | INFO     | mean x (centered): 0.0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | mean y: 2349869.1428571427
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | intersect: 2349869.1428571427
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | chi2: 0.0006930738287659303
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | current memory leak: -0.24 B/s (using 140 data points, chi2=0.00)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | could have reported an average CPU frequency of 2694 MHz (9 samples)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,573 | INFO     | ..............................
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . Timing measurements:
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . get job = 0 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . initial setup = 8 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . payload setup = 16 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . stage-in = 0 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . payload execution = 10124 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . stage-out = 0 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | . log creation = 0 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,574 | INFO     | ..............................
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | 
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | job summary report
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | --------------------------------------------------
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | PanDA job id: 7098075654
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | task id: 49545114
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | errors: (none)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 19:16:18] 2026-04-20 17:15:13,672 | INFO     | pilot state: finished 
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | transexitcode: 0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | exeerrorcode: 0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | exeerrordiag: 
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | exitcode: 0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | exitmsg: OK
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | cpuconsumptiontime: 38414 s
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | nevents: 400
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | neventsw: 0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | pid: 1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | pgrp: 1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | corecount: 4
[2026-04-20 19:16:18] 2026-04-20 17:15:13,673 | INFO     | event service: False
[2026-04-20 19:16:18] 2026-04-20 17:15:13,674 | INFO     | sizes: {0: 2281811, 1: 2283441, 11: 2283469, 10144: 2312630, 10145: 2321652, 10147: 2322094}
[2026-04-20 19:16:18] 2026-04-20 17:15:13,674 | INFO     | --------------------------------------------------
[2026-04-20 19:16:18] 2026-04-20 17:15:13,674 | INFO     | 
[2026-04-20 19:16:18] 2026-04-20 17:15:13,674 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-04-20 19:16:18] 2026-04-20 17:15:13,704 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 19:16:18] 2026-04-20 17:15:13,709 | INFO     | job 7098075654 has completed (purged errors)
[2026-04-20 19:16:18] 2026-04-20 17:15:13,710 | INFO     | overall cleanup function is called
[2026-04-20 19:16:18] 2026-04-20 17:15:14,715 | INFO     | --- collectZombieJob: --- 10, [1807891]
[2026-04-20 19:16:18] 2026-04-20 17:15:14,715 | INFO     | zombie collector waiting for pid 1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:14,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 19:16:18] 2026-04-20 17:15:14,715 | INFO     | collected zombie processes
[2026-04-20 19:16:18] 2026-04-20 17:15:14,716 | INFO     | will attempt to kill all subprocesses of pid=1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:15,536 | INFO     | process IDs to be killed: [1807891] (in reverse order)
[2026-04-20 19:16:18] 2026-04-20 17:15:15,861 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 19:16:18] 2026-04-20 17:15:15,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 19:16:18] 2026-04-20 17:15:15,894 | INFO     | did not find any defunct processes belonging to 1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:15,922 | INFO     | did not find any defunct processes belonging to 1807891
[2026-04-20 19:16:18] 2026-04-20 17:15:15,922 | INFO     | Ready for new job
[2026-04-20 19:16:18] 2026-04-20 17:15:15,924 | INFO     | **************************************
[2026-04-20 19:16:18] 2026-04-20 17:15:15,924 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 19:16:18] 2026-04-20 17:15:15,924 | INFO     | **************************************
[2026-04-20 19:16:18] 2026-04-20 17:15:15,924 | INFO     | 
[2026-04-20 19:16:18] 2026-04-20 17:15:15,933 | INFO     | architecture information:
[2026-04-20 19:16:18] 2026-04-20 17:15:15,933 | INFO     | executing command: cat /etc/os-release
[2026-04-20 19:16:18] 2026-04-20 17:15:15,956 | INFO     | cat /etc/os-release:
[2026-04-20 19:16:18] NAME="CentOS Linux"
[2026-04-20 19:16:18] VERSION="7 (Core)"
[2026-04-20 19:16:18] ID="centos"
[2026-04-20 19:16:18] ID_LIKE="rhel fedora"
[2026-04-20 19:16:18] VERSION_ID="7"
[2026-04-20 19:16:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 19:16:18] ANSI_COLOR="0;31"
[2026-04-20 19:16:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 19:16:18] HOME_URL="https://www.centos.org/"
[2026-04-20 19:16:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 19:16:18] 
[2026-04-20 19:16:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 19:16:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 19:16:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 19:16:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 19:16:18] 
[2026-04-20 19:16:18] 2026-04-20 17:15:15,956 | INFO     | **************************************
[2026-04-20 19:16:18] 2026-04-20 17:15:16,459 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-04-20 19:16:18] 2026-04-20 17:15:16,482 | INFO     | sufficient remaining disk space (209617682432 B)
[2026-04-20 19:16:18] 2026-04-20 17:15:16,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 19:16:18] 2026-04-20 17:15:16,483 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 19:16:18] 2026-04-20 17:15:16,483 | INFO     | update_server=False
[2026-04-20 19:16:18] 2026-04-20 17:15:16,483 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 19:16:18] 2026-04-20 17:15:16,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:16:18] 2026-04-20 17:15:16,484 | INFO     | aborting loop
[2026-04-20 19:16:18] 2026-04-20 17:15:16,586 | INFO     | all data control threads have been joined
[2026-04-20 19:16:18] 2026-04-20 17:15:17,070 | INFO     | all job control threads have been joined
[2026-04-20 19:16:18] 2026-04-20 17:15:17,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 19:16:18] 2026-04-20 17:15:17,209 | INFO     | all payload control threads have been joined
[2026-04-20 19:16:18] 2026-04-20 17:15:17,488 | INFO     | [job] retrieve thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,489 | INFO     | [job] job monitor thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,591 | INFO     | [data] control thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,607 | INFO     | [job] validate thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,619 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,727 | INFO     | [data] copytool_in thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:17,802 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:18,009 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:18,075 | INFO     | [job] control thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:18,096 | INFO     | [payload] validate_post thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:18,214 | INFO     | [payload] control thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:18,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:16:18] 2026-04-20 17:15:18,963 | INFO     | [payload] failed_post thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:19,101 | INFO     | [data] copytool_out thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:19,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 19:16:18] 2026-04-20 17:15:19,664 | INFO     | [job] queue monitor thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:23,540 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:26,841 | INFO     | job.realtimelogging is not enabled
[2026-04-20 19:16:18] 2026-04-20 17:15:27,846 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 19:16:18] 2026-04-20 17:15:45,025 | INFO     | 10168s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-20 19:16:18] 2026-04-20 17:15:46,995 | INFO     | PID=1790767 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 19:16:18] 2026-04-20 17:15:46,995 | INFO     | .. there are 20 such processes running
[2026-04-20 19:16:18] 2026-04-20 17:15:46,997 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 19:16:18] 2026-04-20 17:15:46,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 19:16:18] 2026-04-20 17:15:46,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 19:16:18] 2026-04-20 17:16:11,951 | INFO     | [monitor] cgroup control has ended
[2026-04-20 19:16:18] 2026-04-20 17:16:13,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22508935219008)>', '<ExcThread(monitor, started 22508698089216)>']
[2026-04-20 19:16:18] 2026-04-20 17:16:13,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 19:16:18] 2026-04-20 17:16:13,126 | INFO     | [monitor] control thread has ended
[2026-04-20 19:16:18] 2026-04-20 17:16:18,043 | INFO     | all workflow threads have been joined
[2026-04-20 19:16:18] 2026-04-20 17:16:18,043 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 19:16:18] 2026-04-20 17:16:18,043 | INFO     | traces error code: 0
[2026-04-20 19:16:18] 2026-04-20 17:16:18,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 19:16:18] 2026-04-20 17:16:18,189 [wrapper] ==== pilot stdout END ====
[2026-04-20 19:16:18] 2026-04-20 17:16:18,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 19:16:18] 2026-04-20 17:16:18,198 [wrapper] pilotpid: 1790767
[2026-04-20 19:16:18] 2026-04-20 17:16:18,202 [wrapper] Pilot exit status: 0
[2026-04-20 19:16:18] 2026-04-20 17:16:18,217 [wrapper] pandaids: 7098075654
[2026-04-20 19:16:18] 2026-04-20 17:16:18,412 [wrapper] cleanup supervisor_pilot 2189968 1790768
[2026-04-20 19:16:18] 2026-04-20 17:16:18,416 [wrapper] Test setup, not cleaning
[2026-04-20 19:16:18] 2026-04-20 17:16:18,422 [wrapper] apfmon messages muted
[2026-04-20 19:16:18] 2026-04-20 17:16:18,426 [wrapper] ==== wrapper stdout END ====
[2026-04-20 19:16:18] 2026-04-20 17:16:18,430 [wrapper] ==== wrapper stderr END ====
[2026-04-20 19:16:18]  *** Error codes and diagnostics ***
[2026-04-20 19:16:18]     "exeErrorCode": 0,
[2026-04-20 19:16:18]     "pilotErrorCode": 0,
[2026-04-20 19:16:18]  *** Listing of results directory ***
[2026-04-20 19:16:18] total 463468
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc    650909 Apr 16 18:02 pilot3.tar.gz
[2026-04-20 19:16:18] -rwx------. 1 boinc boinc     36322 Apr 18 11:22 runpilot2-wrapper.sh
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:42 queuedata.json
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc       100 Apr 20 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 19:16:18] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 16:25 run_atlas
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc       105 Apr 20 16:25 job.xml
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc      6541 Apr 20 16:25 init_data.xml
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc 280502155 Apr 20 16:25 EVNT.49539591._000488.pool.root.1
[2026-04-20 19:16:18] drwxrwx--x. 2 boinc boinc      4096 Apr 20 16:25 shared
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc    664484 Apr 20 16:25 input.tar.gz
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc     15665 Apr 20 16:25 start_atlas.sh
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc         0 Apr 20 16:25 boinc_lockfile
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc      2605 Apr 20 16:25 pandaJob.out
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc    997272 Apr 20 16:25 agis_schedconf.cvmfs.json
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc   1512404 Apr 20 16:25 agis_ddmendpoints.agis.ALL.json
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc       440 Apr 20 16:25 workernode_map.json
[2026-04-20 19:16:18] drwx------. 5 boinc boinc      4096 Apr 20 16:25 pilot3
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc 187570568 Apr 20 19:14 HITS.49545114._030754.pool.root.1
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc       487 Apr 20 19:15 boinc_task_state.xml
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc      1027 Apr 20 19:15 memory_monitor_summary.json
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc    284516 Apr 20 19:15 log.49545114._030754.job.log.tgz.1
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc      6367 Apr 20 19:15 heartbeat_new.json
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc      6258 Apr 20 19:15 heartbeat.json
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc        95 Apr 20 19:15 pilot_heartbeat.json
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc      8192 Apr 20 19:16 boinc_mmap_file
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc        27 Apr 20 19:16 wrapper_checkpoint.txt
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc      5018 Apr 20 19:16 pilotlog.txt
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc    941566 Apr 20 19:16 log.49545114._030754.job.log.1
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc       357 Apr 20 19:16 output.list
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc       410 Apr 20 19:16 runtime_log
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc   1239040 Apr 20 19:16 result.tar.gz
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc      8844 Apr 20 19:16 runtime_log.err
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc       666 Apr 20 19:16 4d3e107ee589.diag
[2026-04-20 19:16:18] -rw-r--r--. 1 boinc boinc     20627 Apr 20 19:16 stderr.txt
[2026-04-20 19:16:18] HITS file was successfully produced:
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc 187570568 Apr 20 19:14 shared/HITS.pool.root.1
[2026-04-20 19:16:18]  *** Contents of shared directory: ***
[2026-04-20 19:16:18] total 458992
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc 280502155 Apr 20 16:25 ATLAS.root_0
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc    664484 Apr 20 16:25 input.tar.gz
[2026-04-20 19:16:18] -rw-r--r--. 2 boinc boinc     15665 Apr 20 16:25 start_atlas.sh
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc 187570568 Apr 20 19:14 HITS.pool.root.1
[2026-04-20 19:16:18] -rw-------. 1 boinc boinc   1239040 Apr 20 19:16 result.tar.gz
19:16:19 (1779656): run_atlas exited; CPU time 39061.351465
19:16:19 (1779656): called boinc_finish(0)

</stderr_txt>
]]>

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