Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:06 (3266540): wrapper (7.7.26015): starting
00:05:06 (3266540): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 00:05:06] Arguments: --nthreads 4
[2026-04-21 00:05:06] Threads: 4
[2026-04-21 00:05:06] Checking for CVMFS
[2026-04-21 00:05:06] No cvmfs_config command found, will try listing directly
[2026-04-21 00:05:06] CVMFS is ok
[2026-04-21 00:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 00:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 00:05:06] Further information can be found at the LHC@home message board.
[2026-04-21 00:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 00:05:06] Checking for apptainer binary...
[2026-04-21 00:05:06] which: no apptainer in ((null))
[2026-04-21 00:05:06] apptainer is not installed, using version from CVMFS
[2026-04-21 00:05:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 00:05:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-21 00:05:06] apptainer works
[2026-04-21 00:05:06] Set ATHENA_PROC_NUMBER=4
[2026-04-21 00:05:06] Set ATHENA_CORE_NUMBER=4
[2026-04-21 00:05:06] Starting ATLAS job with PandaID=7098004111
[2026-04-21 00:05:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 02:45:50]  *** The last 200 lines of the pilot log: ***
[2026-04-21 02:45:50] 2026-04-21 00:44:41,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,598 | INFO     | job 7098004111 has state=finished
[2026-04-21 02:45:50] 2026-04-21 00:44:42,599 | INFO     | preparing for final server update for job 7098004111 in state='finished'
[2026-04-21 02:45:50] 2026-04-21 00:44:42,599 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7098004111/jobReport.json
[2026-04-21 02:45:50] 2026-04-21 00:44:42,602 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/4/workernode_map.json
[2026-04-21 02:45:50] 2026-04-21 00:44:42,602 | INFO     | this job has now completed (state=finished)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,602 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,602 | INFO     | log transfer has been attempted: DONE
[2026-04-21 02:45:50] 2026-04-21 00:44:42,602 | INFO     | job 7098004111 has finished - writing final server update
[2026-04-21 02:45:50] 2026-04-21 00:44:42,603 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8913/.job.ad'
[2026-04-21 02:45:50] 2026-04-21 00:44:42,603 | INFO     | total number of processed events: 400 (read)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,627 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7098004111/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,628 | INFO     | extracted standard info from prmon json
[2026-04-21 02:45:50] 2026-04-21 00:44:42,628 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 02:45:50] 2026-04-21 00:44:42,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 02:45:50] 2026-04-21 00:44:42,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 02:45:50] 2026-04-21 00:44:42,632 | INFO     | fitting pss+swap vs Time
[2026-04-21 02:45:50] 2026-04-21 00:44:42,632 | INFO     | sum of square deviations: 1177156955.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,633 | INFO     | sum of deviations: 22618154223.5
[2026-04-21 02:45:50] 2026-04-21 00:44:42,633 | INFO     | mean x (centered): 0.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,633 | INFO     | mean y: 2315409.455128205
[2026-04-21 02:45:50] 2026-04-21 00:44:42,633 | INFO     | intersect: 2315409.455128205
[2026-04-21 02:45:50] 2026-04-21 00:44:42,634 | INFO     | chi2: 1.352664345476885
[2026-04-21 02:45:50] 2026-04-21 00:44:42,634 | INFO     | sum of square deviations: 1067554900.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | sum of deviations: 21790219797.999996
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | mean x (centered): 0.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | mean y: 2314257.1125827814
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | intersect: 2314257.1125827814
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | chi2: 1.353611989448956
[2026-04-21 02:45:50] 2026-04-21 00:44:42,635 | INFO     | current chi2=1.353611989448956 (change=-0.07005758488717603 %)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,636 | INFO     | right removable region: 150
[2026-04-21 02:45:50] 2026-04-21 00:44:42,636 | INFO     | sum of square deviations: 1067554900.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | sum of deviations: 2851033738.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | mean x (centered): 0.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | mean y: 2342438.7549668876
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | intersect: 2342438.7549668876
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | chi2: 0.0007577056739413093
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | current chi2=0.0007577056739413093 (change=99.94398420595064 %)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,637 | INFO     | sum of square deviations: 964976232.5
[2026-04-21 02:45:50] 2026-04-21 00:44:42,638 | INFO     | sum of deviations: 2475379329.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,638 | INFO     | mean x (centered): 0.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,638 | INFO     | mean y: 2342992.4109589043
[2026-04-21 02:45:50] 2026-04-21 00:44:42,639 | INFO     | intersect: 2342992.4109589043
[2026-04-21 02:45:50] 2026-04-21 00:44:42,639 | INFO     | chi2: 0.0006765536898118158
[2026-04-21 02:45:50] 2026-04-21 00:44:42,639 | INFO     | current chi2=0.0006765536898118158 (change=10.710225212828405 %)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,639 | INFO     | left removable region: 10
[2026-04-21 02:45:50] 2026-04-21 00:44:42,639 | INFO     | sum of square deviations: 850825255.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,640 | INFO     | sum of deviations: 2281542984.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,640 | INFO     | mean x (centered): 0.0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,640 | INFO     | mean y: 2342681.4714285713
[2026-04-21 02:45:50] 2026-04-21 00:44:42,640 | INFO     | intersect: 2342681.4714285713
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | chi2: 0.0006586797968379084
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | current memory leak: 2.68 B/s (using 140 data points, chi2=0.00)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | could have reported an average CPU frequency of 2716 MHz (9 samples)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | ..............................
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | . Timing measurements:
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | . get job = 0 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,641 | INFO     | . initial setup = 8 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | . payload setup = 14 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | . stage-in = 0 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | . payload execution = 9516 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | . stage-out = 0 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | . log creation = 0 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,642 | INFO     | ..............................
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | 
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | job summary report
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | --------------------------------------------------
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | PanDA job id: 7098004111
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | task id: 49545114
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | errors: (none)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 02:45:50] 2026-04-21 00:44:42,821 | INFO     | pilot state: finished 
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | transexitcode: 0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | exeerrorcode: 0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | exeerrordiag: 
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | exitcode: 0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | exitmsg: OK
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | cpuconsumptiontime: 36559 s
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | nevents: 400
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | neventsw: 0
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | pid: 3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | pgrp: 3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | corecount: 4
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | event service: False
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | sizes: {0: 2281641, 1: 2283470, 12: 2283470, 9535: 2312303, 9537: 2321323, 9539: 2321379, 9542: 2321765}
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | --------------------------------------------------
[2026-04-21 02:45:50] 2026-04-21 00:44:42,822 | INFO     | 
[2026-04-21 02:45:50] 2026-04-21 00:44:42,823 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-04-21 02:45:50] 2026-04-21 00:44:42,858 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 02:45:50] 2026-04-21 00:44:42,860 | INFO     | job 7098004111 has completed (purged errors)
[2026-04-21 02:45:50] 2026-04-21 00:44:42,860 | INFO     | overall cleanup function is called
[2026-04-21 02:45:50] 2026-04-21 00:44:43,869 | INFO     | --- collectZombieJob: --- 10, [3284127]
[2026-04-21 02:45:50] 2026-04-21 00:44:43,869 | INFO     | zombie collector waiting for pid 3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:43,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 02:45:50] 2026-04-21 00:44:43,869 | INFO     | collected zombie processes
[2026-04-21 02:45:50] 2026-04-21 00:44:43,870 | INFO     | will attempt to kill all subprocesses of pid=3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:44,690 | INFO     | process IDs to be killed: [3284127] (in reverse order)
[2026-04-21 02:45:50] 2026-04-21 00:44:45,027 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 02:45:50] 2026-04-21 00:44:45,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 02:45:50] 2026-04-21 00:44:45,058 | INFO     | did not find any defunct processes belonging to 3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:45,085 | INFO     | did not find any defunct processes belonging to 3284127
[2026-04-21 02:45:50] 2026-04-21 00:44:45,085 | INFO     | Ready for new job
[2026-04-21 02:45:50] 2026-04-21 00:44:45,087 | INFO     | **************************************
[2026-04-21 02:45:50] 2026-04-21 00:44:45,087 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 02:45:50] 2026-04-21 00:44:45,088 | INFO     | **************************************
[2026-04-21 02:45:50] 2026-04-21 00:44:45,088 | INFO     | 
[2026-04-21 02:45:50] 2026-04-21 00:44:45,097 | INFO     | architecture information:
[2026-04-21 02:45:50] 2026-04-21 00:44:45,097 | INFO     | executing command: cat /etc/os-release
[2026-04-21 02:45:50] 2026-04-21 00:44:45,121 | INFO     | cat /etc/os-release:
[2026-04-21 02:45:50] NAME="CentOS Linux"
[2026-04-21 02:45:50] VERSION="7 (Core)"
[2026-04-21 02:45:50] ID="centos"
[2026-04-21 02:45:50] ID_LIKE="rhel fedora"
[2026-04-21 02:45:50] VERSION_ID="7"
[2026-04-21 02:45:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 02:45:50] ANSI_COLOR="0;31"
[2026-04-21 02:45:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 02:45:50] HOME_URL="https://www.centos.org/"
[2026-04-21 02:45:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 02:45:50] 
[2026-04-21 02:45:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 02:45:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 02:45:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 02:45:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 02:45:50] 
[2026-04-21 02:45:50] 2026-04-21 00:44:45,122 | INFO     | **************************************
[2026-04-21 02:45:50] 2026-04-21 00:44:45,625 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-04-21 02:45:50] 2026-04-21 00:44:45,649 | INFO     | sufficient remaining disk space (183726243840 B)
[2026-04-21 02:45:50] 2026-04-21 00:44:45,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 02:45:50] 2026-04-21 00:44:45,650 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 02:45:50] 2026-04-21 00:44:45,650 | INFO     | update_server=False
[2026-04-21 02:45:50] 2026-04-21 00:44:45,650 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 02:45:50] 2026-04-21 00:44:45,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 02:45:50] 2026-04-21 00:44:45,840 | INFO     | all payload control threads have been joined
[2026-04-21 02:45:50] 2026-04-21 00:44:46,038 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 02:45:50] 2026-04-21 00:44:46,038 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 02:45:50] 2026-04-21 00:44:46,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:45:50] 2026-04-21 00:44:46,038 | INFO     | will abort loop
[2026-04-21 02:45:50] 2026-04-21 00:44:46,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 02:45:50] 2026-04-21 00:44:46,182 | INFO     | all job control threads have been joined
[2026-04-21 02:45:50] 2026-04-21 00:44:46,274 | INFO     | all data control threads have been joined
[2026-04-21 02:45:50] 2026-04-21 00:44:46,658 | INFO     | [job] retrieve thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:46,837 | INFO     | [payload] failed_post thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:46,845 | INFO     | [payload] control thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,026 | INFO     | [job] validate thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,043 | INFO     | [job] job monitor thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,187 | INFO     | [job] control thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,279 | INFO     | [data] control thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,327 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,328 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,331 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,712 | INFO     | [data] copytool_in thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:47,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 02:45:50] 2026-04-21 00:44:48,070 | INFO     | [payload] validate_post thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:48,115 | INFO     | [data] copytool_out thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:48,753 | INFO     | [job] queue monitor thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:44:49,759 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 02:45:50] 2026-04-21 00:45:16,035 | INFO     | PID=3273197 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-21 02:45:50] 2026-04-21 00:45:16,035 | INFO     | .. there are 22 such processes running
[2026-04-21 02:45:50] 2026-04-21 00:45:16,036 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 02:45:50] 2026-04-21 00:45:16,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 02:45:50] 2026-04-21 00:45:16,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 02:45:50] 2026-04-21 00:45:44,406 | INFO     | [monitor] cgroup control has ended
[2026-04-21 02:45:50] 2026-04-21 00:45:45,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22573609764672)>', '<ExcThread(monitor, started 22573370058496)>']
[2026-04-21 02:45:50] 2026-04-21 00:45:45,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 02:45:50] 2026-04-21 00:45:45,182 | INFO     | [monitor] control thread has ended
[2026-04-21 02:45:50] 2026-04-21 00:45:50,092 | INFO     | all workflow threads have been joined
[2026-04-21 02:45:50] 2026-04-21 00:45:50,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 02:45:50] 2026-04-21 00:45:50,094 | INFO     | traces error code: 0
[2026-04-21 02:45:50] 2026-04-21 00:45:50,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 02:45:50] 2026-04-21 00:45:50,308 [wrapper] ==== pilot stdout END ====
[2026-04-21 02:45:50] 2026-04-21 00:45:50,313 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 02:45:50] 2026-04-21 00:45:50,317 [wrapper] pilotpid: 3273197
[2026-04-21 02:45:50] 2026-04-21 00:45:50,320 [wrapper] Pilot exit status: 0
[2026-04-21 02:45:50] 2026-04-21 00:45:50,335 [wrapper] pandaids: 7098004111
[2026-04-21 02:45:50] 2026-04-21 00:45:50,542 [wrapper] cleanup supervisor_pilot 3614597 3273198
[2026-04-21 02:45:50] 2026-04-21 00:45:50,547 [wrapper] Test setup, not cleaning
[2026-04-21 02:45:50] 2026-04-21 00:45:50,551 [wrapper] apfmon messages muted
[2026-04-21 02:45:50] 2026-04-21 00:45:50,555 [wrapper] ==== wrapper stdout END ====
[2026-04-21 02:45:50] 2026-04-21 00:45:50,558 [wrapper] ==== wrapper stderr END ====
[2026-04-21 02:45:50]  *** Error codes and diagnostics ***
[2026-04-21 02:45:50]     "exeErrorCode": 0,
[2026-04-21 02:45:50]     "pilotErrorCode": 0,
[2026-04-21 02:45:50]  *** Listing of results directory ***
[2026-04-21 02:45:50] total 459900
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-21 02:45:50] -rwx------. 1 boinc boinc     36322 Apr 18 11:22 runpilot2-wrapper.sh
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:42 queuedata.json
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc       100 Apr 21 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 02:45:50] -rwxr-xr-x. 1 boinc boinc      7986 Apr 21 00:04 run_atlas
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc       105 Apr 21 00:04 job.xml
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc      6538 Apr 21 00:05 init_data.xml
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc 278188568 Apr 21 00:05 EVNT.49539591._000517.pool.root.1
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:05 start_atlas.sh
[2026-04-21 02:45:50] drwxrwx--x. 2 boinc boinc      4096 Apr 21 00:05 shared
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc    656944 Apr 21 00:05 input.tar.gz
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc         0 Apr 21 00:05 boinc_lockfile
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc      2606 Apr 21 00:05 pandaJob.out
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc    997486 Apr 21 00:05 agis_schedconf.cvmfs.json
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc   1512404 Apr 21 00:05 agis_ddmendpoints.agis.ALL.json
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc       439 Apr 21 00:05 workernode_map.json
[2026-04-21 02:45:50] drwx------. 5 boinc boinc      4096 Apr 21 00:05 pilot3
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc 186342745 Apr 21 02:44 HITS.49545114._030624.pool.root.1
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc       487 Apr 21 02:44 boinc_task_state.xml
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc      1026 Apr 21 02:44 memory_monitor_summary.json
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc    282957 Apr 21 02:44 log.49545114._030624.job.log.tgz.1
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc      6359 Apr 21 02:44 heartbeat_new.json
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc      6250 Apr 21 02:44 heartbeat.json
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc        95 Apr 21 02:45 pilot_heartbeat.json
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc      8192 Apr 21 02:45 boinc_mmap_file
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc        27 Apr 21 02:45 wrapper_checkpoint.txt
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc      5016 Apr 21 02:45 pilotlog.txt
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc    891592 Apr 21 02:45 log.49545114._030624.job.log.1
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc       357 Apr 21 02:45 output.list
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc       410 Apr 21 02:45 runtime_log
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc   1187840 Apr 21 02:45 result.tar.gz
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc      8826 Apr 21 02:45 runtime_log.err
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc       663 Apr 21 02:45 4d3eb1acff0b.diag
[2026-04-21 02:45:50] -rw-r--r--. 1 boinc boinc     21065 Apr 21 02:45 stderr.txt
[2026-04-21 02:45:50] HITS file was successfully produced:
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc 186342745 Apr 21 02:44 shared/HITS.pool.root.1
[2026-04-21 02:45:50]  *** Contents of shared directory: ***
[2026-04-21 02:45:50] total 455476
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc 278188568 Apr 21 00:05 ATLAS.root_0
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc     15665 Apr 21 00:05 start_atlas.sh
[2026-04-21 02:45:50] -rw-r--r--. 2 boinc boinc    656944 Apr 21 00:05 input.tar.gz
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc 186342745 Apr 21 02:44 HITS.pool.root.1
[2026-04-21 02:45:50] -rw-------. 1 boinc boinc   1187840 Apr 21 02:45 result.tar.gz
02:45:51 (3266540): run_atlas exited; CPU time 37152.244413
02:45:51 (3266540): called boinc_finish(0)

</stderr_txt>
]]>

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