Name 4d3301f24777_0
Workunit 240754903
Created 18 Apr 2026, 9:42:40 UTC
Sent 18 Apr 2026, 11:44:37 UTC
Report deadline 26 Apr 2026, 11:44:37 UTC
Received 18 Apr 2026, 13:00:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10696763
Run time 1 hours 10 min 57 sec
CPU time 12 hours 43 min 40 sec
Priority 28
Validate state Valid
Credit 295.79
Device peak FLOPS 34.20 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.72 GB
Peak swap size 3.22 GB
Peak disk usage 718.38 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:44:58 (27568): wrapper (7.7.26015): starting
07:44:58 (27568): wrapper: running run_atlas (--nthreads 12)
[2026-04-18 07:44:58] Arguments: --nthreads 12
[2026-04-18 07:44:58] Threads: 12
[2026-04-18 07:44:58] Checking for CVMFS
[2026-04-18 07:44:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 07:44:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 07:44:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 07:44:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 07:44:59] 2.11.2.0 22587 208100 98224 158583 1 50 19558027 20275201 1 130560 0 78198883 99.914 11698582 25611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 07:44:59] CVMFS is ok
[2026-04-18 07:44:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 07:44:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 07:44:59] Further information can be found at the LHC@home message board.
[2026-04-18 07:44:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 07:44:59] Checking for apptainer binary...
[2026-04-18 07:44:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 07:44:59] Running /usr/bin/apptainer --version
[2026-04-18 07:44:59] apptainer version 1.3.2-1.el7
[2026-04-18 07:44:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 07:45:00] c-205-13.aglt2.org
[2026-04-18 07:45:00] apptainer works
[2026-04-18 07:45:00] Set ATHENA_PROC_NUMBER=12
[2026-04-18 07:45:00] Set ATHENA_CORE_NUMBER=12
[2026-04-18 07:45:00] Starting ATLAS job with PandaID=7098003874
[2026-04-18 07:45:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 08:55:52]  *** The last 200 lines of the pilot log: ***
[2026-04-18 08:55:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-18 08:55:52]  is_altstaged=None
[2026-04-18 08:55:52]  is_tar=False
[2026-04-18 08:55:52]  lfn=log.49545114._030387.job.log.tgz.1
[2026-04-18 08:55:52]  mtime=0
[2026-04-18 08:55:52]  protocol_id=None
[2026-04-18 08:55:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-18 08:55:52]  replicas=None
[2026-04-18 08:55:52]  scope=mc23_13p6TeV
[2026-04-18 08:55:52]  status=None
[2026-04-18 08:55:52]  status_code=0
[2026-04-18 08:55:52]  storage_token=
[2026-04-18 08:55:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7098003874/log.49545114._030387.job.log.tgz.1
[2026-04-18 08:55:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/cf/log.49545114._030387.job.log.tgz.1
[2026-04-18 08:55:52]  workdir=None
[2026-04-18 08:55:52] ]
[2026-04-18 08:55:52] 2026-04-18 12:55:15,049 | INFO     | transferring file log.49545114._030387.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7098003874/log.49545114._030387.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-18 08:55:52] 2026-04-18 12:55:15,049 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7098003874/log.49545114._030387.job.log.tgz.1 /tmp/boinchome/slots/0/log.49545114._030387.job
[2026-04-18 08:55:52] 2026-04-18 12:55:15,071 | INFO     | adding to output.list: log.49545114._030387.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/cf/log.49545114._030387.job.log.tg
[2026-04-18 08:55:52] 2026-04-18 12:55:15,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-18 08:55:52] 2026-04-18 12:55:15,072 | INFO     | summary of transferred files:
[2026-04-18 08:55:52] 2026-04-18 12:55:15,072 | INFO     |  -- lfn=log.49545114._030387.job.log.tgz.1, status_code=0, status=transferred
[2026-04-18 08:55:52] 2026-04-18 12:55:15,072 | INFO     | stage-out finished correctly
[2026-04-18 08:55:52] 2026-04-18 12:55:16,941 | WARNING  | process 3650 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 08:55:52] 2026-04-18 12:55:16,941 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7098003874/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 08:55:52] 2026-04-18 12:55:17,027 | INFO     | number of running child processes to parent process 3650: 1
[2026-04-18 08:55:52] 2026-04-18 12:55:17,027 | INFO     | maximum number of monitored processes: 6
[2026-04-18 08:55:52] 2026-04-18 12:55:18,261 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-18 08:55:52] 2026-04-18 12:55:19,530 | INFO     | monitor loop #321: job 0:7098003874 is in state 'finished'
[2026-04-18 08:55:52] 2026-04-18 12:55:19,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,759 | INFO     | job 7098003874 has state=finished
[2026-04-18 08:55:52] 2026-04-18 12:55:19,759 | INFO     | preparing for final server update for job 7098003874 in state='finished'
[2026-04-18 08:55:52] 2026-04-18 12:55:19,759 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7098003874/jobReport.json
[2026-04-18 08:55:52] 2026-04-18 12:55:19,761 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-18 08:55:52] 2026-04-18 12:55:19,761 | INFO     | this job has now completed (state=finished)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,761 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,761 | INFO     | log transfer has been attempted: DONE
[2026-04-18 08:55:52] 2026-04-18 12:55:19,762 | INFO     | job 7098003874 has finished - writing final server update
[2026-04-18 08:55:52] 2026-04-18 12:55:19,762 | INFO     | total number of processed events: 400 (read)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,764 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7098003874/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,764 | INFO     | extracted standard info from prmon json
[2026-04-18 08:55:52] 2026-04-18 12:55:19,764 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 08:55:52] 2026-04-18 12:55:19,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 08:55:52] 2026-04-18 12:55:19,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 08:55:52] 2026-04-18 12:55:19,766 | INFO     | fitting pss+swap vs Time
[2026-04-18 08:55:52] 2026-04-18 12:55:19,766 | INFO     | sum of square deviations: 73882315.5
[2026-04-18 08:55:52] 2026-04-18 12:55:19,766 | INFO     | sum of deviations: -7201699893.999998
[2026-04-18 08:55:52] 2026-04-18 12:55:19,766 | INFO     | mean x (centered): 0.0
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | mean y: 2820266.7419354836
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | intersect: 2820266.7419354836
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | chi2: 0.04872289679083162
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | current memory leak: -97.48 B/s (using 62 data points, chi2=0.05)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-04-18 08:55:52] 2026-04-18 12:55:19,767 | INFO     | ..............................
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . Timing measurements:
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . get job = 0 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . initial setup = 7 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . payload setup = 13 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . stage-in = 0 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . payload execution = 4162 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . stage-out = 0 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | . log creation = 0 s
[2026-04-18 08:55:52] 2026-04-18 12:55:19,768 | INFO     | ..............................
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | 
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | job summary report
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | --------------------------------------------------
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | PanDA job id: 7098003874
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | task id: 49545114
[2026-04-18 08:55:52] 2026-04-18 12:55:20,148 | INFO     | errors: (none)
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | pilot state: finished 
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | transexitcode: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | exeerrorcode: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | exeerrordiag: 
[2026-04-18 08:55:52] 2026-04-18 12:55:20,149 | INFO     | exitcode: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | exitmsg: OK
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | cpuconsumptiontime: 45769 s
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | nevents: 400
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | neventsw: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | pid: 3650
[2026-04-18 08:55:52] 2026-04-18 12:55:20,150 | INFO     | pgrp: 3650
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | corecount: 12
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | event service: False
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | sizes: {0: 2281630, 1: 2283459, 11: 2283459, 4180: 2309437, 4182: 2318435, 4185: 2318491, 4187: 2318813}
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | --------------------------------------------------
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | 
[2026-04-18 08:55:52] 2026-04-18 12:55:20,151 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 08:55:52] 2026-04-18 12:55:20,175 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,178 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 08:55:52] 2026-04-18 12:55:20,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,179 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 08:55:52] 2026-04-18 12:55:20,179 | INFO     | job 7098003874 has completed (purged errors)
[2026-04-18 08:55:52] 2026-04-18 12:55:20,179 | INFO     | overall cleanup function is called
[2026-04-18 08:55:52] 2026-04-18 12:55:21,185 | INFO     | --- collectZombieJob: --- 10, [3650]
[2026-04-18 08:55:52] 2026-04-18 12:55:21,185 | INFO     | zombie collector waiting for pid 3650
[2026-04-18 08:55:52] 2026-04-18 12:55:21,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 08:55:52] 2026-04-18 12:55:21,185 | INFO     | collected zombie processes
[2026-04-18 08:55:52] 2026-04-18 12:55:21,185 | INFO     | will attempt to kill all subprocesses of pid=3650
[2026-04-18 08:55:52] 2026-04-18 12:55:21,278 | INFO     | process IDs to be killed: [3650] (in reverse order)
[2026-04-18 08:55:52] 2026-04-18 12:55:21,329 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 08:55:52] 2026-04-18 12:55:21,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 08:55:52] 2026-04-18 12:55:21,333 | INFO     | did not find any defunct processes belonging to 3650
[2026-04-18 08:55:52] 2026-04-18 12:55:21,337 | INFO     | did not find any defunct processes belonging to 3650
[2026-04-18 08:55:52] 2026-04-18 12:55:21,337 | INFO     | Ready for new job
[2026-04-18 08:55:52] 2026-04-18 12:55:21,339 | INFO     | **************************************
[2026-04-18 08:55:52] 2026-04-18 12:55:21,339 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 08:55:52] 2026-04-18 12:55:21,339 | INFO     | **************************************
[2026-04-18 08:55:52] 2026-04-18 12:55:21,339 | INFO     | 
[2026-04-18 08:55:52] 2026-04-18 12:55:21,340 | INFO     | architecture information:
[2026-04-18 08:55:52] 2026-04-18 12:55:21,340 | INFO     | executing command: cat /etc/os-release
[2026-04-18 08:55:52] 2026-04-18 12:55:21,355 | INFO     | cat /etc/os-release:
[2026-04-18 08:55:52] NAME="CentOS Linux"
[2026-04-18 08:55:52] VERSION="7 (Core)"
[2026-04-18 08:55:52] ID="centos"
[2026-04-18 08:55:52] ID_LIKE="rhel fedora"
[2026-04-18 08:55:52] VERSION_ID="7"
[2026-04-18 08:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 08:55:52] ANSI_COLOR="0;31"
[2026-04-18 08:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 08:55:52] HOME_URL="https://www.centos.org/"
[2026-04-18 08:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 08:55:52] 
[2026-04-18 08:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 08:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 08:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 08:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 08:55:52] 
[2026-04-18 08:55:52] 2026-04-18 12:55:21,356 | INFO     | **************************************
[2026-04-18 08:55:52] 2026-04-18 12:55:21,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 08:55:52] 2026-04-18 12:55:21,875 | INFO     | sufficient remaining disk space (29209133056 B)
[2026-04-18 08:55:52] 2026-04-18 12:55:21,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 08:55:52] 2026-04-18 12:55:21,876 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 08:55:52] 2026-04-18 12:55:21,876 | INFO     | update_server=False
[2026-04-18 08:55:52] 2026-04-18 12:55:21,876 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 08:55:52] 2026-04-18 12:55:22,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-18 08:55:52] 2026-04-18 12:55:22,032 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-18 08:55:52] 2026-04-18 12:55:22,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 08:55:52] 2026-04-18 12:55:22,032 | INFO     | will abort loop
[2026-04-18 08:55:52] 2026-04-18 12:55:22,249 | INFO     | all payload control threads have been joined
[2026-04-18 08:55:52] 2026-04-18 12:55:22,341 | INFO     | all job control threads have been joined
[2026-04-18 08:55:52] 2026-04-18 12:55:22,590 | INFO     | all data control threads have been joined
[2026-04-18 08:55:52] 2026-04-18 12:55:22,881 | INFO     | [job] retrieve thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:22,908 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,022 | INFO     | [payload] failed_post thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,038 | INFO     | [job] job monitor thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,118 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,163 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 08:55:52] 2026-04-18 12:55:23,218 | INFO     | [data] copytool_in thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,254 | INFO     | [payload] control thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,346 | INFO     | [job] control thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,595 | INFO     | [data] control thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:23,620 | INFO     | [payload] validate_post thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:24,161 | INFO     | [job] validate thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:24,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 08:55:52] 2026-04-18 12:55:24,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 08:55:52] 2026-04-18 12:55:25,170 | INFO     | [data] copytool_out thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:25,861 | INFO     | [job] queue monitor thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:28,092 | INFO     | [monitor] cgroup control has ended
[2026-04-18 08:55:52] 2026-04-18 12:55:28,353 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:31,967 | INFO     | job.realtimelogging is not enabled
[2026-04-18 08:55:52] 2026-04-18 12:55:32,973 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 08:55:52] 2026-04-18 12:55:33,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470160217920)>', '<ExcThread(monitor, started 140469120005888)>']
[2026-04-18 08:55:52] 2026-04-18 12:55:38,063 | INFO     | all workflow threads have been joined
[2026-04-18 08:55:52] 2026-04-18 12:55:38,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 08:55:52] 2026-04-18 12:55:38,063 | INFO     | traces error code: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:38,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 08:55:52] 2026-04-18 12:55:51,722 | INFO     | PID=31544 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | CRITICAL | thread 'MainThread' is not alive
[2026-04-18 08:55:52] 2026-04-18 12:55:51,730 | INFO     | [monitor] control thread has ended
[2026-04-18 08:55:52] 2026-04-18 12:55:51,824 [wrapper] ==== pilot stdout END ====
[2026-04-18 08:55:52] 2026-04-18 12:55:51,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 08:55:52] 2026-04-18 12:55:51,832 [wrapper] pilotpid: 31544
[2026-04-18 08:55:52] 2026-04-18 12:55:51,836 [wrapper] Pilot exit status: 0
[2026-04-18 08:55:52] 2026-04-18 12:55:51,851 [wrapper] pandaids: 7098003874
[2026-04-18 08:55:52] 2026-04-18 12:55:51,890 [wrapper] cleanup supervisor_pilot 24189 31545
[2026-04-18 08:55:52] 2026-04-18 12:55:51,894 [wrapper] Test setup, not cleaning
[2026-04-18 08:55:52] 2026-04-18 12:55:51,898 [wrapper] apfmon messages muted
[2026-04-18 08:55:52] 2026-04-18 12:55:51,902 [wrapper] ==== wrapper stdout END ====
[2026-04-18 08:55:52] 2026-04-18 12:55:51,906 [wrapper] ==== wrapper stderr END ====
[2026-04-18 08:55:52]  *** Error codes and diagnostics ***
[2026-04-18 08:55:52]     "exeErrorCode": 0,
[2026-04-18 08:55:52]     "pilotErrorCode": 0,
[2026-04-18 08:55:52]  *** Listing of results directory ***
[2026-04-18 08:55:52] total 461948
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-18 08:55:52] -rwx------ 1 boincer umatlas     36322 Apr 18 05:21 runpilot2-wrapper.sh
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 05:33 queuedata.json
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas       100 Apr 18 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 08:55:52] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 07:44 run_atlas
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas       105 Apr 18 07:44 job.xml
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas 281337474 Apr 18 07:44 EVNT.49539591._000504.pool.root.1
[2026-04-18 08:55:52] drwxrwx--x 2 boincer umatlas      4096 Apr 18 07:44 shared
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas    656942 Apr 18 07:44 input.tar.gz
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 07:44 start_atlas.sh
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas         0 Apr 18 07:44 boinc_lockfile
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas      2606 Apr 18 07:45 pandaJob.out
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas        57 Apr 18 07:45 setup.sh.local
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas    997957 Apr 18 07:45 agis_schedconf.cvmfs.json
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas   1512404 Apr 18 07:45 agis_ddmendpoints.agis.ALL.json
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas       445 Apr 18 07:45 workernode_map.json
[2026-04-18 08:55:52] drwx------ 5 boincer umatlas      4096 Apr 18 07:45 pilot3
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas      5869 Apr 18 08:48 init_data.xml
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas 186089414 Apr 18 08:54 HITS.49545114._030387.pool.root.1
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas       487 Apr 18 08:54 boinc_task_state.xml
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas      1046 Apr 18 08:55 memory_monitor_summary.json
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas        95 Apr 18 08:55 pilot_heartbeat.json
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas    367725 Apr 18 08:55 log.49545114._030387.job.log.tgz.1
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas      6441 Apr 18 08:55 heartbeat_new.json
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas      6332 Apr 18 08:55 heartbeat.json
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 08:55 boinc_mmap_file
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas        27 Apr 18 08:55 wrapper_checkpoint.txt
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas       815 Apr 18 08:55 pilotlog.txt
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas    413236 Apr 18 08:55 log.49545114._030387.job.log.1
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas       357 Apr 18 08:55 output.list
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas       410 Apr 18 08:55 runtime_log
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas    798720 Apr 18 08:55 result.tar.gz
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas      8965 Apr 18 08:55 runtime_log.err
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas       659 Apr 18 08:55 4d3301f24777.diag
[2026-04-18 08:55:52] -rw-r--r-- 1 boincer umatlas     21334 Apr 18 08:55 stderr.txt
[2026-04-18 08:55:52] HITS file was successfully produced:
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas 186089414 Apr 18 08:54 shared/HITS.pool.root.1
[2026-04-18 08:55:52]  *** Contents of shared directory: ***
[2026-04-18 08:55:52] total 457912
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas 281337474 Apr 18 07:44 ATLAS.root_0
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas    656942 Apr 18 07:44 input.tar.gz
[2026-04-18 08:55:52] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 07:44 start_atlas.sh
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas 186089414 Apr 18 08:54 HITS.pool.root.1
[2026-04-18 08:55:52] -rw------- 1 boincer umatlas    798720 Apr 18 08:55 result.tar.gz
08:55:53 (27568): run_atlas exited; CPU time 45750.950954
08:55:53 (27568): called boinc_finish(0)

</stderr_txt>
]]>


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