Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:02 (2737208): wrapper (7.7.26015): starting
07:40:02 (2737208): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 07:40:02] Arguments: --nthreads 8
[2026-04-18 07:40:02] Threads: 8
[2026-04-18 07:40:02] Checking for CVMFS
[2026-04-18 07:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 07:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 07:40:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 07:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 07:40:03] 2.13.3.0 7069 166054 376132 158583 1 406 35689838 40960000 9615 16776704 0 292826267 99.629 359404250 35104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 07:40:03] CVMFS is ok
[2026-04-18 07:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 07:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 07:40:03] Further information can be found at the LHC@home message board.
[2026-04-18 07:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 07:40:03] Checking for apptainer binary...
[2026-04-18 07:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 07:40:03] Running /usr/bin/apptainer --version
[2026-04-18 07:40:03] apptainer version 1.4.5-2.el9
[2026-04-18 07:40:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 07:40:03] c-210-35-3.aglt2.org
[2026-04-18 07:40:03] apptainer works
[2026-04-18 07:40:03] Set ATHENA_PROC_NUMBER=8
[2026-04-18 07:40:03] Set ATHENA_CORE_NUMBER=8
[2026-04-18 07:40:03] Starting ATLAS job with PandaID=7098003669
[2026-04-18 07:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 12:12:00]  *** The last 200 lines of the pilot log: ***
[2026-04-18 12:12:00] 2026-04-18 16:11:21,568 | INFO     | number of running child processes to parent process 2754291: 1
[2026-04-18 12:12:00] 2026-04-18 16:11:21,569 | INFO     | maximum number of monitored processes: 6
[2026-04-18 12:12:00] 2026-04-18 16:11:23,480 | INFO     | job 7098003669 has state=finished
[2026-04-18 12:12:00] 2026-04-18 16:11:23,480 | INFO     | preparing for final server update for job 7098003669 in state='finished'
[2026-04-18 12:12:00] 2026-04-18 16:11:23,504 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7098003669/jobReport.json
[2026-04-18 12:12:00] 2026-04-18 16:11:23,506 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-18 12:12:00] 2026-04-18 16:11:23,507 | INFO     | this job has now completed (state=finished)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,507 | INFO     | log transfer has been attempted: DONE
[2026-04-18 12:12:00] 2026-04-18 16:11:23,507 | INFO     | job 7098003669 has finished - writing final server update
[2026-04-18 12:12:00] 2026-04-18 16:11:23,507 | INFO     | total number of processed events: 400 (read)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,548 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7098003669/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,548 | INFO     | extracted standard info from prmon json
[2026-04-18 12:12:00] 2026-04-18 16:11:23,549 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 12:12:00] 2026-04-18 16:11:23,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 12:12:00] 2026-04-18 16:11:23,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 12:12:00] 2026-04-18 16:11:23,554 | INFO     | fitting pss+swap vs Time
[2026-04-18 12:12:00] 2026-04-18 16:11:23,555 | INFO     | sum of square deviations: 5836377996.695505
[2026-04-18 12:12:00] 2026-04-18 16:11:23,556 | INFO     | sum of deviations: 8848532889.116554
[2026-04-18 12:12:00] 2026-04-18 16:11:23,557 | INFO     | mean x (centered): 0.0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,557 | INFO     | mean y: 2544928.1240601502
[2026-04-18 12:12:00] 2026-04-18 16:11:23,557 | INFO     | intersect: 2544928.1240601502
[2026-04-18 12:12:00] 2026-04-18 16:11:23,558 | INFO     | chi2: 1.3966893073526532
[2026-04-18 12:12:00] 2026-04-18 16:11:23,558 | INFO     | sum of square deviations: 5513460923.088139
[2026-04-18 12:12:00] 2026-04-18 16:11:23,560 | INFO     | sum of deviations: 8629851470.808426
[2026-04-18 12:12:00] 2026-04-18 16:11:23,560 | INFO     | mean x (centered): 0.0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,560 | INFO     | mean y: 2544827.662835249
[2026-04-18 12:12:00] 2026-04-18 16:11:23,561 | INFO     | intersect: 2544827.662835249
[2026-04-18 12:12:00] 2026-04-18 16:11:23,561 | INFO     | chi2: 1.3967210541316735
[2026-04-18 12:12:00] 2026-04-18 16:11:23,561 | INFO     | current chi2=1.3967210541316735 (change=-0.0022730022241285812 %)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,561 | INFO     | right removable region: 260
[2026-04-18 12:12:00] 2026-04-18 16:11:23,562 | INFO     | sum of square deviations: 5513385283.088139
[2026-04-18 12:12:00] 2026-04-18 16:11:23,563 | INFO     | sum of deviations: -28274016197.5747
[2026-04-18 12:12:00] 2026-04-18 16:11:23,563 | INFO     | mean x (centered): 0.0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,563 | INFO     | mean y: 2562289.988505747
[2026-04-18 12:12:00] 2026-04-18 16:11:23,564 | INFO     | intersect: 2562289.988505747
[2026-04-18 12:12:00] 2026-04-18 16:11:23,564 | INFO     | chi2: 0.0843142936816379
[2026-04-18 12:12:00] 2026-04-18 16:11:23,564 | INFO     | current chi2=0.0843142936816379 (change=93.9632749217898 %)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,565 | INFO     | sum of square deviations: 5202532331.9375
[2026-04-18 12:12:00] 2026-04-18 16:11:23,566 | INFO     | sum of deviations: -23370477311.890625
[2026-04-18 12:12:00] 2026-04-18 16:11:23,566 | INFO     | mean x (centered): 0.0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,567 | INFO     | mean y: 2559882.02734375
[2026-04-18 12:12:00] 2026-04-18 16:11:23,567 | INFO     | intersect: 2559882.02734375
[2026-04-18 12:12:00] 2026-04-18 16:11:23,567 | INFO     | chi2: 0.07893152990421737
[2026-04-18 12:12:00] 2026-04-18 16:11:23,567 | INFO     | current chi2=0.07893152990421737 (change=6.3841651781432125 %)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,567 | INFO     | left removable region: 10
[2026-04-18 12:12:00] 2026-04-18 16:11:23,568 | INFO     | sum of square deviations: 4845281285.983977
[2026-04-18 12:12:00] 2026-04-18 16:11:23,570 | INFO     | sum of deviations: -22930182030.864006
[2026-04-18 12:12:00] 2026-04-18 16:11:23,570 | INFO     | mean x (centered): 0.0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,570 | INFO     | mean y: 2560110.568
[2026-04-18 12:12:00] 2026-04-18 16:11:23,570 | INFO     | intersect: 2560110.568
[2026-04-18 12:12:00] 2026-04-18 16:11:23,571 | INFO     | chi2: 0.07805826488475008
[2026-04-18 12:12:00] 2026-04-18 16:11:23,571 | INFO     | current memory leak: -4.73 B/s (using 250 data points, chi2=0.08)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | could have reported an average CPU frequency of 2677 MHz (13 samples)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | ..............................
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . Timing measurements:
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . get job = 0 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . initial setup = 7 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . payload setup = 11 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . stage-in = 0 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . payload execution = 16228 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . stage-out = 3 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | . log creation = 0 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,572 | INFO     | ..............................
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | 
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | job summary report
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | --------------------------------------------------
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | PanDA job id: 7098003669
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | task id: 49545114
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | errors: (none)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | pilot state: finished 
[2026-04-18 12:12:00] 2026-04-18 16:11:23,711 | INFO     | transexitcode: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | exeerrorcode: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | exeerrordiag: 
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | exitcode: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | exitmsg: OK
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | cpuconsumptiontime: 43173 s
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | nevents: 400
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | neventsw: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | pid: 2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | pgrp: 2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | corecount: 8
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | event service: False
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | sizes: {0: 2283431, 11: 2283431, 16243: 2315350, 16244: 2315349, 16248: 2324459, 16251: 2324597}
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | --------------------------------------------------
[2026-04-18 12:12:00] 2026-04-18 16:11:23,712 | INFO     | 
[2026-04-18 12:12:00] 2026-04-18 16:11:23,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-18 12:12:00] 2026-04-18 16:11:23,827 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | job 7098003669 has completed (purged errors)
[2026-04-18 12:12:00] 2026-04-18 16:11:23,829 | INFO     | overall cleanup function is called
[2026-04-18 12:12:00] 2026-04-18 16:11:24,842 | INFO     | --- collectZombieJob: --- 10, [2754291]
[2026-04-18 12:12:00] 2026-04-18 16:11:24,842 | INFO     | zombie collector waiting for pid 2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:24,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 12:12:00] 2026-04-18 16:11:24,842 | INFO     | collected zombie processes
[2026-04-18 12:12:00] 2026-04-18 16:11:24,842 | INFO     | will attempt to kill all subprocesses of pid=2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:25,852 | INFO     | PID=2744522 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-18 12:12:00] 2026-04-18 16:11:25,852 | INFO     | .. there are 10 such processes running
[2026-04-18 12:12:00] 2026-04-18 16:11:26,069 | INFO     | process IDs to be killed: [2754291] (in reverse order)
[2026-04-18 12:12:00] 2026-04-18 16:11:26,413 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 12:12:00] 2026-04-18 16:11:26,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 12:12:00] 2026-04-18 16:11:26,462 | INFO     | did not find any defunct processes belonging to 2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:26,487 | INFO     | did not find any defunct processes belonging to 2754291
[2026-04-18 12:12:00] 2026-04-18 16:11:26,512 | INFO     | Ready for new job
[2026-04-18 12:12:00] 2026-04-18 16:11:26,514 | INFO     | **************************************
[2026-04-18 12:12:00] 2026-04-18 16:11:26,514 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 12:12:00] 2026-04-18 16:11:26,514 | INFO     | **************************************
[2026-04-18 12:12:00] 2026-04-18 16:11:26,514 | INFO     | 
[2026-04-18 12:12:00] 2026-04-18 16:11:26,538 | INFO     | architecture information:
[2026-04-18 12:12:00] 2026-04-18 16:11:26,561 | INFO     | executing command: cat /etc/os-release
[2026-04-18 12:12:00] 2026-04-18 16:11:26,657 | INFO     | cat /etc/os-release:
[2026-04-18 12:12:00] NAME="CentOS Linux"
[2026-04-18 12:12:00] VERSION="7 (Core)"
[2026-04-18 12:12:00] ID="centos"
[2026-04-18 12:12:00] ID_LIKE="rhel fedora"
[2026-04-18 12:12:00] VERSION_ID="7"
[2026-04-18 12:12:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 12:12:00] ANSI_COLOR="0;31"
[2026-04-18 12:12:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 12:12:00] HOME_URL="https://www.centos.org/"
[2026-04-18 12:12:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 12:12:00] 
[2026-04-18 12:12:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 12:12:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 12:12:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 12:12:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 12:12:00] 
[2026-04-18 12:12:00] 2026-04-18 16:11:26,657 | INFO     | **************************************
[2026-04-18 12:12:00] 2026-04-18 16:11:27,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-18 12:12:00] 2026-04-18 16:11:27,198 | INFO     | sufficient remaining disk space (73745301504 B)
[2026-04-18 12:12:00] 2026-04-18 16:11:27,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 12:12:00] 2026-04-18 16:11:27,198 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 12:12:00] 2026-04-18 16:11:27,199 | INFO     | update_server=False
[2026-04-18 12:12:00] 2026-04-18 16:11:27,199 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 12:12:00] 2026-04-18 16:11:27,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 12:12:00] 2026-04-18 16:11:27,532 | INFO     | all data control threads have been joined
[2026-04-18 12:12:00] 2026-04-18 16:11:27,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:12:00] 2026-04-18 16:11:27,670 | INFO     | aborting loop
[2026-04-18 12:12:00] 2026-04-18 16:11:27,934 | INFO     | all job control threads have been joined
[2026-04-18 12:12:00] 2026-04-18 16:11:28,042 | INFO     | all payload control threads have been joined
[2026-04-18 12:12:00] 2026-04-18 16:11:28,205 | INFO     | [job] retrieve thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,364 | INFO     | [job] validate thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,408 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 12:12:00] 2026-04-18 16:11:28,538 | INFO     | [data] control thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,571 | INFO     | [data] copytool_in thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,629 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,683 | INFO     | [job] job monitor thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:12:00] 2026-04-18 16:11:28,793 | INFO     | [payload] validate_post thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:28,940 | INFO     | [job] control thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:29,047 | INFO     | [payload] control thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:29,236 | INFO     | [payload] failed_post thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:29,636 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:29,799 | INFO     | [job] queue monitor thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:30,498 | INFO     | [data] copytool_out thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:31,208 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 12:12:00] 2026-04-18 16:11:49,114 | INFO     | [monitor] cgroup control has ended
[2026-04-18 12:12:00] 2026-04-18 16:11:49,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241225598784)>', '<ExcThread(monitor, started 140240857581312)>']
[2026-04-18 12:12:00] 2026-04-18 16:11:54,180 | INFO     | all workflow threads have been joined
[2026-04-18 12:12:00] 2026-04-18 16:11:54,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 12:12:00] 2026-04-18 16:11:54,180 | INFO     | traces error code: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:54,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | INFO     | PID=2744522 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | INFO     | .. there are 10 such processes running
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 12:12:00] 2026-04-18 16:11:58,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 12:12:00] 2026-04-18 16:11:58,200 | INFO     | [monitor] control thread has ended
[2026-04-18 12:12:00] 2026-04-18 16:11:59,012 [wrapper] ==== pilot stdout END ====
[2026-04-18 12:12:00] 2026-04-18 16:11:59,057 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 12:12:00] 2026-04-18 16:11:59,091 [wrapper] pilotpid: 2744522
[2026-04-18 12:12:00] 2026-04-18 16:11:59,127 [wrapper] Pilot exit status: 0
[2026-04-18 12:12:00] 2026-04-18 16:11:59,265 [wrapper] pandaids: 7098003669
[2026-04-18 12:12:00] 2026-04-18 16:12:00,032 [wrapper] cleanup supervisor_pilot 3178843 2744523
[2026-04-18 12:12:00] 2026-04-18 16:12:00,082 [wrapper] Test setup, not cleaning
[2026-04-18 12:12:00] 2026-04-18 16:12:00,122 [wrapper] apfmon messages muted
[2026-04-18 12:12:00] 2026-04-18 16:12:00,175 [wrapper] ==== wrapper stdout END ====
[2026-04-18 12:12:00] 2026-04-18 16:12:00,205 [wrapper] ==== wrapper stderr END ====
[2026-04-18 12:12:00]  *** Error codes and diagnostics ***
[2026-04-18 12:12:00]     "exeErrorCode": 0,
[2026-04-18 12:12:00]     "pilotErrorCode": 0,
[2026-04-18 12:12:00]  *** Listing of results directory ***
[2026-04-18 12:12:00] total 462440
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-18 12:12:00] -rwx------. 1 boincer umatlas     36322 Apr 18 05:21 runpilot2-wrapper.sh
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 05:33 queuedata.json
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas       100 Apr 18 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 12:12:00] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 07:40 run_atlas
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas       105 Apr 18 07:40 job.xml
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas 279640998 Apr 18 07:40 EVNT.49539591._000472.pool.root.1
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 07:40 start_atlas.sh
[2026-04-18 12:12:00] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 07:40 shared
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas    656946 Apr 18 07:40 input.tar.gz
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas         0 Apr 18 07:40 boinc_lockfile
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas      2606 Apr 18 07:40 pandaJob.out
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas        57 Apr 18 07:40 setup.sh.local
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas    997957 Apr 18 07:40 agis_schedconf.cvmfs.json
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas       442 Apr 18 07:40 workernode_map.json
[2026-04-18 12:12:00] drwx------. 5 boincer umatlas      4096 Apr 18 07:40 pilot3
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas      6758 Apr 18 12:00 init_data.xml
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas 186209027 Apr 18 12:10 HITS.49545114._030254.pool.root.1
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas       488 Apr 18 12:10 boinc_task_state.xml
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas      1065 Apr 18 12:11 memory_monitor_summary.json
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas        95 Apr 18 12:11 pilot_heartbeat.json
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas   1512404 Apr 18 12:11 agis_ddmendpoints.agis.ALL.json
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas    416487 Apr 18 12:11 log.49545114._030254.job.log.tgz.1
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas      6431 Apr 18 12:11 heartbeat_new.json
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas      6322 Apr 18 12:11 heartbeat.json
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 12:11 boinc_mmap_file
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas        28 Apr 18 12:11 wrapper_checkpoint.txt
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas       823 Apr 18 12:11 pilotlog.txt
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas   1398880 Apr 18 12:12 log.49545114._030254.job.log.1
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas       357 Apr 18 12:12 output.list
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas       410 Apr 18 12:12 runtime_log
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas   1832960 Apr 18 12:12 result.tar.gz
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas      8974 Apr 18 12:12 runtime_log.err
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas       660 Apr 18 12:12 4d2899b6e64e.diag
[2026-04-18 12:12:00] -rw-r--r--. 1 boincer umatlas     21275 Apr 18 12:12 stderr.txt
[2026-04-18 12:12:00] HITS file was successfully produced:
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas 186209027 Apr 18 12:10 shared/HITS.pool.root.1
[2026-04-18 12:12:00]  *** Contents of shared directory: ***
[2026-04-18 12:12:00] total 457392
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas 279640998 Apr 18 07:40 ATLAS.root_0
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 07:40 start_atlas.sh
[2026-04-18 12:12:00] -rw-r--r--. 2 boincer umatlas    656946 Apr 18 07:40 input.tar.gz
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas 186209027 Apr 18 12:10 HITS.pool.root.1
[2026-04-18 12:12:00] -rw-------. 1 boincer umatlas   1832960 Apr 18 12:12 result.tar.gz
12:12:02 (2737208): run_atlas exited; CPU time 43572.092945
12:12:02 (2737208): called boinc_finish(0)

</stderr_txt>
]]>

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