Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:48 (2940142): wrapper (7.7.26015): starting
09:30:48 (2940142): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 09:30:48] Arguments: --nthreads 8
[2026-04-18 09:30:48] Threads: 8
[2026-04-18 09:30:48] Checking for CVMFS
[2026-04-18 09:30:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 09:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 09:30:49] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 09:30:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 09:30:50] 2.13.3.0 7069 166165 365544 158585 2 104 36712127 40960000 11479 16776704 0 292970445 99.629 359873854 35117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 09:30:50] CVMFS is ok
[2026-04-18 09:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 09:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 09:30:51] Further information can be found at the LHC@home message board.
[2026-04-18 09:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 09:30:51] Checking for apptainer binary...
[2026-04-18 09:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 09:30:51] Running /usr/bin/apptainer --version
[2026-04-18 09:30:51] apptainer version 1.4.5-2.el9
[2026-04-18 09:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 09:30:51] c-210-35-3.aglt2.org
[2026-04-18 09:30:51] apptainer works
[2026-04-18 09:30:51] Set ATHENA_PROC_NUMBER=8
[2026-04-18 09:30:51] Set ATHENA_CORE_NUMBER=8
[2026-04-18 09:30:51] Starting ATLAS job with PandaID=7098003596
[2026-04-18 09:30:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 13:32:37]  *** The last 200 lines of the pilot log: ***
[2026-04-18 13:32:37] 2026-04-18 17:31:54,292 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7098003596/jobReport.json
[2026-04-18 13:32:37] 2026-04-18 17:31:54,298 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-04-18 13:32:37] 2026-04-18 17:31:54,299 | INFO     | this job has now completed (state=finished)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,299 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,299 | INFO     | log transfer has been attempted: DONE
[2026-04-18 13:32:37] 2026-04-18 17:31:54,299 | INFO     | job 7098003596 has finished - writing final server update
[2026-04-18 13:32:37] 2026-04-18 17:31:54,299 | INFO     | total number of processed events: 400 (read)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,322 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7098003596/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,323 | INFO     | extracted standard info from prmon json
[2026-04-18 13:32:37] 2026-04-18 17:31:54,323 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 13:32:37] 2026-04-18 17:31:54,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 13:32:37] 2026-04-18 17:31:54,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 13:32:37] 2026-04-18 17:31:54,331 | INFO     | fitting pss+swap vs Time
[2026-04-18 13:32:37] 2026-04-18 17:31:54,332 | INFO     | sum of square deviations: 4023934019.9744816
[2026-04-18 13:32:37] 2026-04-18 17:31:54,333 | INFO     | sum of deviations: 32218985480.302116
[2026-04-18 13:32:37] 2026-04-18 17:31:54,333 | INFO     | mean x (centered): 0.0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,334 | INFO     | mean y: 2508121.770212766
[2026-04-18 13:32:37] 2026-04-18 17:31:54,338 | INFO     | intersect: 2508121.770212766
[2026-04-18 13:32:37] 2026-04-18 17:31:54,338 | INFO     | chi2: 3.9701505194379436
[2026-04-18 13:32:37] 2026-04-18 17:31:54,339 | INFO     | sum of square deviations: 3772522366.821745
[2026-04-18 13:32:37] 2026-04-18 17:31:54,340 | INFO     | sum of deviations: 45840088148.57393
[2026-04-18 13:32:37] 2026-04-18 17:31:54,340 | INFO     | mean x (centered): 0.0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,340 | INFO     | mean y: 2516228.9217391303
[2026-04-18 13:32:37] 2026-04-18 17:31:54,340 | INFO     | intersect: 2516228.9217391303
[2026-04-18 13:32:37] 2026-04-18 17:31:54,341 | INFO     | chi2: 3.3078626889628704
[2026-04-18 13:32:37] 2026-04-18 17:31:54,341 | INFO     | current chi2=3.3078626889628704 (change=16.68168063735865 %)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,341 | INFO     | right removable region: 229
[2026-04-18 13:32:37] 2026-04-18 17:31:54,341 | INFO     | sum of square deviations: 3772471126.821745
[2026-04-18 13:32:37] 2026-04-18 17:31:54,347 | INFO     | sum of deviations: -29692002559.08261
[2026-04-18 13:32:37] 2026-04-18 17:31:54,347 | INFO     | mean x (centered): 0.0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,347 | INFO     | mean y: 2545504.3521739133
[2026-04-18 13:32:37] 2026-04-18 17:31:54,347 | INFO     | intersect: 2545504.3521739133
[2026-04-18 13:32:37] 2026-04-18 17:31:54,347 | INFO     | chi2: 1.098967631929392
[2026-04-18 13:32:37] 2026-04-18 17:31:54,348 | INFO     | current chi2=1.098967631929392 (change=72.31924516340571 %)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,348 | INFO     | sum of square deviations: 3531706108.6399817
[2026-04-18 13:32:37] 2026-04-18 17:31:54,349 | INFO     | sum of deviations: -42256903944.81335
[2026-04-18 13:32:37] 2026-04-18 17:31:54,349 | INFO     | mean x (centered): 0.0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,350 | INFO     | mean y: 2553444.831111111
[2026-04-18 13:32:37] 2026-04-18 17:31:54,354 | INFO     | intersect: 2553444.831111111
[2026-04-18 13:32:37] 2026-04-18 17:31:54,354 | INFO     | chi2: 0.9619600852534438
[2026-04-18 13:32:37] 2026-04-18 17:31:54,354 | INFO     | current chi2=0.9619600852534438 (change=12.466931936422203 %)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,354 | INFO     | left removable region: 10
[2026-04-18 13:32:37] 2026-04-18 17:31:54,355 | INFO     | sum of square deviations: 3256643321.780824
[2026-04-18 13:32:37] 2026-04-18 17:31:54,356 | INFO     | sum of deviations: -27578644027.82192
[2026-04-18 13:32:37] 2026-04-18 17:31:54,356 | INFO     | mean x (centered): 0.0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,356 | INFO     | mean y: 2562998.771689498
[2026-04-18 13:32:37] 2026-04-18 17:31:54,356 | INFO     | intersect: 2562998.771689498
[2026-04-18 13:32:37] 2026-04-18 17:31:54,361 | INFO     | chi2: 0.26357768248565394
[2026-04-18 13:32:37] 2026-04-18 17:31:54,361 | INFO     | current memory leak: -8.47 B/s (using 219 data points, chi2=0.26)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | could have reported an average CPU frequency of 2726 MHz (11 samples)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | ..............................
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . Timing measurements:
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . get job = 0 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . initial setup = 25 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . payload setup = 63 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . stage-in = 0 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,362 | INFO     | . payload execution = 14304 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,363 | INFO     | . stage-out = 3 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,363 | INFO     | . log creation = 0 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,363 | INFO     | ..............................
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | 
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | job summary report
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | --------------------------------------------------
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | PanDA job id: 7098003596
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | task id: 49545114
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | errors: (none)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 13:32:37] 2026-04-18 17:31:54,529 | INFO     | pilot state: finished 
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | transexitcode: 0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | exeerrorcode: 0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | exeerrordiag: 
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | exitcode: 0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | exitmsg: OK
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | cpuconsumptiontime: 43862 s
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | nevents: 400
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | neventsw: 0
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | pid: 2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | pgrp: 2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | corecount: 8
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | event service: False
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | sizes: {0: 2281574, 1: 2281658, 2: 2283487, 13: 2283487, 14371: 2314485, 14374: 2323483, 14375: 2323667, 14376: 2323861}
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | --------------------------------------------------
[2026-04-18 13:32:37] 2026-04-18 17:31:54,530 | INFO     | 
[2026-04-18 13:32:37] 2026-04-18 17:31:54,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-18 13:32:37] 2026-04-18 17:31:54,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | job 7098003596 has completed (purged errors)
[2026-04-18 13:32:37] 2026-04-18 17:31:54,611 | INFO     | overall cleanup function is called
[2026-04-18 13:32:37] 2026-04-18 17:31:55,403 | WARNING  | process 2961631 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 13:32:37] 2026-04-18 17:31:55,645 | INFO     | --- collectZombieJob: --- 10, [2961631]
[2026-04-18 13:32:37] 2026-04-18 17:31:55,645 | INFO     | zombie collector waiting for pid 2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:55,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 13:32:37] 2026-04-18 17:31:55,645 | INFO     | collected zombie processes
[2026-04-18 13:32:37] 2026-04-18 17:31:55,645 | INFO     | will attempt to kill all subprocesses of pid=2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:56,017 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 13:32:37] 2026-04-18 17:31:56,510 | INFO     | process IDs to be killed: [2961631] (in reverse order)
[2026-04-18 13:32:37] 2026-04-18 17:31:56,715 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 13:32:37] 2026-04-18 17:31:56,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 13:32:37] 2026-04-18 17:31:56,739 | INFO     | did not find any defunct processes belonging to 2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:56,792 | INFO     | did not find any defunct processes belonging to 2961631
[2026-04-18 13:32:37] 2026-04-18 17:31:56,792 | INFO     | Ready for new job
[2026-04-18 13:32:37] 2026-04-18 17:31:56,806 | INFO     | **************************************
[2026-04-18 13:32:37] 2026-04-18 17:31:56,806 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 13:32:37] 2026-04-18 17:31:56,807 | INFO     | **************************************
[2026-04-18 13:32:37] 2026-04-18 17:31:56,807 | INFO     | 
[2026-04-18 13:32:37] 2026-04-18 17:31:56,810 | INFO     | architecture information:
[2026-04-18 13:32:37] 2026-04-18 17:31:56,811 | INFO     | executing command: cat /etc/os-release
[2026-04-18 13:32:37] 2026-04-18 17:31:56,867 | INFO     | number of running child processes to parent process 2961631: 1
[2026-04-18 13:32:37] 2026-04-18 17:31:56,868 | INFO     | maximum number of monitored processes: 6
[2026-04-18 13:32:37] 2026-04-18 17:31:56,868 | INFO     | aborting job monitoring since job object (job id=7098003596) has expired
[2026-04-18 13:32:37] 2026-04-18 17:31:56,888 | INFO     | cat /etc/os-release:
[2026-04-18 13:32:37] NAME="CentOS Linux"
[2026-04-18 13:32:37] VERSION="7 (Core)"
[2026-04-18 13:32:37] ID="centos"
[2026-04-18 13:32:37] ID_LIKE="rhel fedora"
[2026-04-18 13:32:37] VERSION_ID="7"
[2026-04-18 13:32:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 13:32:37] ANSI_COLOR="0;31"
[2026-04-18 13:32:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 13:32:37] HOME_URL="https://www.centos.org/"
[2026-04-18 13:32:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 13:32:37] 
[2026-04-18 13:32:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 13:32:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 13:32:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 13:32:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 13:32:37] 
[2026-04-18 13:32:37] 2026-04-18 17:31:56,889 | INFO     | **************************************
[2026-04-18 13:32:37] 2026-04-18 17:31:57,392 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-18 13:32:37] 2026-04-18 17:31:57,445 | INFO     | sufficient remaining disk space (67980230656 B)
[2026-04-18 13:32:37] 2026-04-18 17:31:57,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 13:32:37] 2026-04-18 17:31:57,446 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 13:32:37] 2026-04-18 17:31:57,446 | INFO     | update_server=False
[2026-04-18 13:32:37] 2026-04-18 17:31:57,446 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 13:32:37] 2026-04-18 17:31:57,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:32:37] 2026-04-18 17:31:57,447 | INFO     | will abort loop
[2026-04-18 13:32:37] 2026-04-18 17:31:57,550 | INFO     | all payload control threads have been joined
[2026-04-18 13:32:37] 2026-04-18 17:31:57,918 | INFO     | all data control threads have been joined
[2026-04-18 13:32:37] 2026-04-18 17:31:58,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 13:32:37] 2026-04-18 17:31:58,453 | INFO     | [job] job monitor thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,464 | INFO     | [job] retrieve thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,535 | INFO     | [job] validate thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,556 | INFO     | [payload] control thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,663 | INFO     | [data] copytool_in thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,733 | INFO     | [payload] failed_post thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,765 | INFO     | all job control threads have been joined
[2026-04-18 13:32:37] 2026-04-18 17:31:58,842 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:58,924 | INFO     | [data] control thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:59,283 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:59,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 13:32:37] 2026-04-18 17:31:59,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:32:37] 2026-04-18 17:31:59,771 | INFO     | [job] control thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:31:59,820 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:00,022 | INFO     | [payload] validate_post thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:00,120 | INFO     | [data] copytool_out thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:00,551 | INFO     | [job] queue monitor thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:03,557 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:07,546 | INFO     | job.realtimelogging is not enabled
[2026-04-18 13:32:37] 2026-04-18 17:32:08,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 13:32:37] 2026-04-18 17:32:27,816 | INFO     | PID=2947359 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 13:32:37] 2026-04-18 17:32:27,817 | INFO     | .. there are 10 such processes running
[2026-04-18 13:32:37] 2026-04-18 17:32:27,817 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 13:32:37] 2026-04-18 17:32:27,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 13:32:37] 2026-04-18 17:32:27,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 13:32:37] 2026-04-18 17:32:30,139 | INFO     | [monitor] cgroup control has ended
[2026-04-18 13:32:37] 2026-04-18 17:32:31,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434886768448)>', '<ExcThread(monitor, started 140434315650816)>']
[2026-04-18 13:32:37] 2026-04-18 17:32:31,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 13:32:37] 2026-04-18 17:32:31,839 | INFO     | [monitor] control thread has ended
[2026-04-18 13:32:37] 2026-04-18 17:32:36,159 | INFO     | all workflow threads have been joined
[2026-04-18 13:32:37] 2026-04-18 17:32:36,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 13:32:37] 2026-04-18 17:32:36,159 | INFO     | traces error code: 0
[2026-04-18 13:32:37] 2026-04-18 17:32:36,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 13:32:37] 2026-04-18 17:32:36,582 [wrapper] ==== pilot stdout END ====
[2026-04-18 13:32:37] 2026-04-18 17:32:36,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 13:32:37] 2026-04-18 17:32:36,605 [wrapper] pilotpid: 2947359
[2026-04-18 13:32:37] 2026-04-18 17:32:36,612 [wrapper] Pilot exit status: 0
[2026-04-18 13:32:37] 2026-04-18 17:32:36,710 [wrapper] pandaids: 7098003596
[2026-04-18 13:32:37] 2026-04-18 17:32:36,889 [wrapper] cleanup supervisor_pilot 3351741 2947360
[2026-04-18 13:32:37] 2026-04-18 17:32:36,892 [wrapper] Test setup, not cleaning
[2026-04-18 13:32:37] 2026-04-18 17:32:36,895 [wrapper] apfmon messages muted
[2026-04-18 13:32:37] 2026-04-18 17:32:36,898 [wrapper] ==== wrapper stdout END ====
[2026-04-18 13:32:37] 2026-04-18 17:32:36,900 [wrapper] ==== wrapper stderr END ====
[2026-04-18 13:32:37]  *** Error codes and diagnostics ***
[2026-04-18 13:32:37]     "exeErrorCode": 0,
[2026-04-18 13:32:37]     "pilotErrorCode": 0,
[2026-04-18 13:32:37]  *** Listing of results directory ***
[2026-04-18 13:32:37] total 465148
[2026-04-18 13:32:37] -rwx------. 1 boincer umatlas     36322 Apr 18 04:56 runpilot2-wrapper.sh
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 05:06 queuedata.json
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas       100 Apr 18 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 13:32:37] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 09:30 run_atlas
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas       105 Apr 18 09:30 job.xml
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas 279374247 Apr 18 09:30 EVNT.49539591._000457.pool.root.1
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 09:30 start_atlas.sh
[2026-04-18 13:32:37] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 09:30 shared
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas    656944 Apr 18 09:30 input.tar.gz
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas         0 Apr 18 09:30 boinc_lockfile
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas      2606 Apr 18 09:30 pandaJob.out
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas        57 Apr 18 09:30 setup.sh.local
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas    997973 Apr 18 09:31 agis_schedconf.cvmfs.json
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas       443 Apr 18 09:31 workernode_map.json
[2026-04-18 13:32:37] drwx------. 5 boincer umatlas      4096 Apr 18 09:32 pilot3
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas      6759 Apr 18 13:29 init_data.xml
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas 189546758 Apr 18 13:30 HITS.49545114._030181.pool.root.1
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas       488 Apr 18 13:30 boinc_task_state.xml
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas      1056 Apr 18 13:31 memory_monitor_summary.json
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas        95 Apr 18 13:31 pilot_heartbeat.json
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas   1512404 Apr 18 13:31 agis_ddmendpoints.agis.ALL.json
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas    404064 Apr 18 13:31 log.49545114._030181.job.log.tgz.1
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas      6440 Apr 18 13:31 heartbeat_new.json
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas      6331 Apr 18 13:31 heartbeat.json
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 13:32 boinc_mmap_file
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas        28 Apr 18 13:32 wrapper_checkpoint.txt
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas      5181 Apr 18 13:32 pilotlog.txt
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas   1258728 Apr 18 13:32 log.49545114._030181.job.log.1
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas       357 Apr 18 13:32 output.list
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas       410 Apr 18 13:32 runtime_log
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas   1679360 Apr 18 13:32 result.tar.gz
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas      8974 Apr 18 13:32 runtime_log.err
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas       663 Apr 18 13:32 472a7c119857.diag
[2026-04-18 13:32:37] -rw-r--r--. 1 boincer umatlas     21270 Apr 18 13:32 stderr.txt
[2026-04-18 13:32:37] HITS file was successfully produced:
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas 189546758 Apr 18 13:30 shared/HITS.pool.root.1
[2026-04-18 13:32:37]  *** Contents of shared directory: ***
[2026-04-18 13:32:37] total 460244
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas 279374247 Apr 18 09:30 ATLAS.root_0
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 09:30 start_atlas.sh
[2026-04-18 13:32:37] -rw-r--r--. 2 boincer umatlas    656944 Apr 18 09:30 input.tar.gz
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas 189546758 Apr 18 13:30 HITS.pool.root.1
[2026-04-18 13:32:37] -rw-------. 1 boincer umatlas   1679360 Apr 18 13:32 result.tar.gz
13:32:38 (2940142): run_atlas exited; CPU time 44204.600583
13:32:38 (2940142): called boinc_finish(0)

</stderr_txt>
]]>

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