Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:52 (1027306): wrapper (7.7.26015): starting
16:29:52 (1027306): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 16:29:52] Arguments: --nthreads 4
[2026-04-20 16:29:52] Threads: 4
[2026-04-20 16:29:52] Checking for CVMFS
[2026-04-20 16:29:52] No cvmfs_config command found, will try listing directly
[2026-04-20 16:29:52] CVMFS is ok
[2026-04-20 16:29:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 16:29:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 16:29:52] Further information can be found at the LHC@home message board.
[2026-04-20 16:29:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 16:29:52] Checking for apptainer binary...
[2026-04-20 16:29:52] which: no apptainer in ((null))
[2026-04-20 16:29:52] apptainer is not installed, using version from CVMFS
[2026-04-20 16:29:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 16:29:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-20 16:29:52] apptainer works
[2026-04-20 16:29:52] Set ATHENA_PROC_NUMBER=4
[2026-04-20 16:29:52] Set ATHENA_CORE_NUMBER=4
[2026-04-20 16:29:52] Starting ATLAS job with PandaID=7097870250
[2026-04-20 16:29:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 19:08:39]  *** The last 200 lines of the pilot log: ***
[2026-04-20 19:08:39] 2026-04-20 17:08:02,598 | INFO     | sum of deviations: 23085108095.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,599 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,599 | INFO     | mean y: 2312008.3806451615
[2026-04-20 19:08:39] 2026-04-20 17:08:02,599 | INFO     | intersect: 2312008.3806451615
[2026-04-20 19:08:39] 2026-04-20 17:08:02,599 | INFO     | chi2: 1.439401930357233
[2026-04-20 19:08:39] 2026-04-20 17:08:02,599 | INFO     | sum of square deviations: 1046484737.5
[2026-04-20 19:08:39] 2026-04-20 17:08:02,601 | INFO     | sum of deviations: 22206690679.5
[2026-04-20 19:08:39] 2026-04-20 17:08:02,601 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,601 | INFO     | mean y: 2310770.26
[2026-04-20 19:08:39] 2026-04-20 17:08:02,601 | INFO     | intersect: 2310770.26
[2026-04-20 19:08:39] 2026-04-20 17:08:02,601 | INFO     | chi2: 1.4405052447310513
[2026-04-20 19:08:39] 2026-04-20 17:08:02,602 | INFO     | current chi2=1.4405052447310513 (change=-0.07665088885524593 %)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,602 | INFO     | right removable region: 149
[2026-04-20 19:08:39] 2026-04-20 17:08:02,602 | INFO     | sum of square deviations: 1046484737.5
[2026-04-20 19:08:39] 2026-04-20 17:08:02,603 | INFO     | sum of deviations: 1309907259.4999998
[2026-04-20 19:08:39] 2026-04-20 17:08:02,603 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,603 | INFO     | mean y: 2342254.526666667
[2026-04-20 19:08:39] 2026-04-20 17:08:02,603 | INFO     | intersect: 2342254.526666667
[2026-04-20 19:08:39] 2026-04-20 17:08:02,603 | INFO     | chi2: 0.008020916116378233
[2026-04-20 19:08:39] 2026-04-20 17:08:02,604 | INFO     | current chi2=0.008020916116378233 (change=99.44276050023167 %)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,604 | INFO     | sum of square deviations: 945282840.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | sum of deviations: -257090051.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | mean y: 2344584.0896551725
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | intersect: 2344584.0896551725
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | chi2: 0.0007687383382408461
[2026-04-20 19:08:39] 2026-04-20 17:08:02,605 | INFO     | current chi2=0.0007687383382408461 (change=90.41582872720575 %)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,606 | INFO     | sum of square deviations: 850825255.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,606 | INFO     | sum of deviations: -557599047.9999998
[2026-04-20 19:08:39] 2026-04-20 17:08:02,607 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,607 | INFO     | mean y: 2345066.557142857
[2026-04-20 19:08:39] 2026-04-20 17:08:02,607 | INFO     | intersect: 2345066.557142857
[2026-04-20 19:08:39] 2026-04-20 17:08:02,607 | INFO     | chi2: 0.0005246345647904102
[2026-04-20 19:08:39] 2026-04-20 17:08:02,607 | INFO     | current chi2=0.0005246345647904102 (change=31.75381808185011 %)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,608 | INFO     | sum of square deviations: 762879420.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,608 | INFO     | sum of deviations: -643255614.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,608 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | mean y: 2345213.362962963
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | intersect: 2345213.362962963
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | chi2: 0.0004717935728630963
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | current chi2=0.0004717935728630963 (change=10.071961604059343 %)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | left removable region: 20
[2026-04-20 19:08:39] 2026-04-20 17:08:02,609 | INFO     | sum of square deviations: 665612480.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,610 | INFO     | sum of deviations: -733750700.0000002
[2026-04-20 19:08:39] 2026-04-20 17:08:02,610 | INFO     | mean x (centered): 0.0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,610 | INFO     | mean y: 2345044.3333333335
[2026-04-20 19:08:39] 2026-04-20 17:08:02,610 | INFO     | intersect: 2345044.3333333335
[2026-04-20 19:08:39] 2026-04-20 17:08:02,611 | INFO     | chi2: 0.0004059387892828552
[2026-04-20 19:08:39] 2026-04-20 17:08:02,611 | INFO     | current memory leak: -1.10 B/s (using 129 data points, chi2=0.00)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,611 | INFO     | could have reported an average CPU frequency of 2718 MHz (9 samples)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | ..............................
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . Timing measurements:
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . get job = 0 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . initial setup = 8 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . payload setup = 16 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . stage-in = 0 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . payload execution = 9431 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . stage-out = 0 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | . log creation = 0 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,612 | INFO     | ..............................
[2026-04-20 19:08:39] 2026-04-20 17:08:02,713 | INFO     | 
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | job summary report
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | --------------------------------------------------
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | PanDA job id: 7097870250
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | task id: 49545114
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | errors: (none)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | pilot state: finished 
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | transexitcode: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | exeerrorcode: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,714 | INFO     | exeerrordiag: 
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | exitcode: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | exitmsg: OK
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | cpuconsumptiontime: 35798 s
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | nevents: 400
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | neventsw: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | pid: 1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | pgrp: 1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | corecount: 4
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | event service: False
[2026-04-20 19:08:39] 2026-04-20 17:08:02,715 | INFO     | sizes: {0: 2281585, 1: 2283470, 12: 2283470, 9451: 2312275, 9452: 2321295, 9453: 2321351, 9454: 2321737}
[2026-04-20 19:08:39] 2026-04-20 17:08:02,716 | INFO     | --------------------------------------------------
[2026-04-20 19:08:39] 2026-04-20 17:08:02,716 | INFO     | 
[2026-04-20 19:08:39] 2026-04-20 17:08:02,716 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-04-20 19:08:39] 2026-04-20 17:08:02,751 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 19:08:39] 2026-04-20 17:08:02,753 | INFO     | job 7097870250 has completed (purged errors)
[2026-04-20 19:08:39] 2026-04-20 17:08:02,754 | INFO     | overall cleanup function is called
[2026-04-20 19:08:39] 2026-04-20 17:08:02,910 | WARNING  | process 1042751 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 19:08:39] 2026-04-20 17:08:03,531 | INFO     | using path: /var/lib/boinc/var/slot48/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 19:08:39] 2026-04-20 17:08:03,760 | INFO     | --- collectZombieJob: --- 10, [1042751]
[2026-04-20 19:08:39] 2026-04-20 17:08:03,760 | INFO     | zombie collector waiting for pid 1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:03,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 19:08:39] 2026-04-20 17:08:03,760 | INFO     | collected zombie processes
[2026-04-20 19:08:39] 2026-04-20 17:08:03,761 | INFO     | will attempt to kill all subprocesses of pid=1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:05,261 | INFO     | number of running child processes to parent process 1042751: 1
[2026-04-20 19:08:39] 2026-04-20 17:08:05,261 | INFO     | maximum number of monitored processes: 6
[2026-04-20 19:08:39] 2026-04-20 17:08:05,262 | INFO     | aborting job monitoring since job object (job id=7097870250) has expired
[2026-04-20 19:08:39] 2026-04-20 17:08:05,533 | INFO     | process IDs to be killed: [1042751] (in reverse order)
[2026-04-20 19:08:39] 2026-04-20 17:08:05,894 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 19:08:39] 2026-04-20 17:08:05,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 19:08:39] 2026-04-20 17:08:05,924 | INFO     | did not find any defunct processes belonging to 1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:05,949 | INFO     | did not find any defunct processes belonging to 1042751
[2026-04-20 19:08:39] 2026-04-20 17:08:05,949 | INFO     | Ready for new job
[2026-04-20 19:08:39] 2026-04-20 17:08:05,951 | INFO     | **************************************
[2026-04-20 19:08:39] 2026-04-20 17:08:05,954 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 19:08:39] 2026-04-20 17:08:05,954 | INFO     | **************************************
[2026-04-20 19:08:39] 2026-04-20 17:08:05,954 | INFO     | 
[2026-04-20 19:08:39] 2026-04-20 17:08:05,963 | INFO     | architecture information:
[2026-04-20 19:08:39] 2026-04-20 17:08:05,963 | INFO     | executing command: cat /etc/os-release
[2026-04-20 19:08:39] 2026-04-20 17:08:05,983 | INFO     | cat /etc/os-release:
[2026-04-20 19:08:39] NAME="CentOS Linux"
[2026-04-20 19:08:39] VERSION="7 (Core)"
[2026-04-20 19:08:39] ID="centos"
[2026-04-20 19:08:39] ID_LIKE="rhel fedora"
[2026-04-20 19:08:39] VERSION_ID="7"
[2026-04-20 19:08:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 19:08:39] ANSI_COLOR="0;31"
[2026-04-20 19:08:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 19:08:39] HOME_URL="https://www.centos.org/"
[2026-04-20 19:08:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 19:08:39] 
[2026-04-20 19:08:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 19:08:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 19:08:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 19:08:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 19:08:39] 
[2026-04-20 19:08:39] 2026-04-20 17:08:05,984 | INFO     | **************************************
[2026-04-20 19:08:39] 2026-04-20 17:08:06,486 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-04-20 19:08:39] 2026-04-20 17:08:06,511 | INFO     | sufficient remaining disk space (200519188480 B)
[2026-04-20 19:08:39] 2026-04-20 17:08:06,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 19:08:39] 2026-04-20 17:08:06,512 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 19:08:39] 2026-04-20 17:08:06,512 | INFO     | update_server=False
[2026-04-20 19:08:39] 2026-04-20 17:08:06,512 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 19:08:39] 2026-04-20 17:08:06,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:08:39] 2026-04-20 17:08:06,512 | INFO     | aborting loop
[2026-04-20 19:08:39] 2026-04-20 17:08:06,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 19:08:39] 2026-04-20 17:08:06,889 | INFO     | all data control threads have been joined
[2026-04-20 19:08:39] 2026-04-20 17:08:07,141 | INFO     | all job control threads have been joined
[2026-04-20 19:08:39] 2026-04-20 17:08:07,187 | INFO     | all payload control threads have been joined
[2026-04-20 19:08:39] 2026-04-20 17:08:07,517 | INFO     | [job] job monitor thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:07,518 | INFO     | [job] retrieve thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:07,637 | INFO     | [payload] validate_post thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:07,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 19:08:39] 2026-04-20 17:08:07,894 | INFO     | [data] control thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,067 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,091 | INFO     | [job] validate thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,147 | INFO     | [job] control thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 19:08:39] 2026-04-20 17:08:08,192 | INFO     | [payload] control thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,290 | INFO     | [payload] failed_post thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,311 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,464 | INFO     | [data] copytool_in thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,644 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,645 | INFO     | [data] copytool_out thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:08,729 | INFO     | [job] queue monitor thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:12,157 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:16,692 | INFO     | job.realtimelogging is not enabled
[2026-04-20 19:08:39] 2026-04-20 17:08:17,697 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 19:08:39] 2026-04-20 17:08:32,253 | INFO     | [monitor] cgroup control has ended
[2026-04-20 19:08:39] 2026-04-20 17:08:34,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22464220350272)>', '<ExcThread(monitor, started 22463976310528)>']
[2026-04-20 19:08:39] 2026-04-20 17:08:35,032 | INFO     | PID=1031951 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-20 19:08:39] 2026-04-20 17:08:35,036 | INFO     | .. there are 22 such processes running
[2026-04-20 19:08:39] 2026-04-20 17:08:35,037 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 19:08:39] 2026-04-20 17:08:35,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 19:08:39] 2026-04-20 17:08:35,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 19:08:39] 2026-04-20 17:08:35,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 19:08:39] 2026-04-20 17:08:35,037 | INFO     | [monitor] control thread has ended
[2026-04-20 19:08:39] 2026-04-20 17:08:39,362 | INFO     | all workflow threads have been joined
[2026-04-20 19:08:39] 2026-04-20 17:08:39,362 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 19:08:39] 2026-04-20 17:08:39,362 | INFO     | traces error code: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:39,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 19:08:39] 2026-04-20 17:08:39,568 [wrapper] ==== pilot stdout END ====
[2026-04-20 19:08:39] 2026-04-20 17:08:39,572 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 19:08:39] 2026-04-20 17:08:39,577 [wrapper] pilotpid: 1031951
[2026-04-20 19:08:39] 2026-04-20 17:08:39,582 [wrapper] Pilot exit status: 0
[2026-04-20 19:08:39] 2026-04-20 17:08:39,601 [wrapper] pandaids: 7097870250
[2026-04-20 19:08:39] 2026-04-20 17:08:39,805 [wrapper] cleanup supervisor_pilot 1442216 1031952
[2026-04-20 19:08:39] 2026-04-20 17:08:39,809 [wrapper] Test setup, not cleaning
[2026-04-20 19:08:39] 2026-04-20 17:08:39,812 [wrapper] apfmon messages muted
[2026-04-20 19:08:39] 2026-04-20 17:08:39,814 [wrapper] ==== wrapper stdout END ====
[2026-04-20 19:08:39] 2026-04-20 17:08:39,818 [wrapper] ==== wrapper stderr END ====
[2026-04-20 19:08:39]  *** Error codes and diagnostics ***
[2026-04-20 19:08:39]     "exeErrorCode": 0,
[2026-04-20 19:08:39]     "pilotErrorCode": 0,
[2026-04-20 19:08:39]  *** Listing of results directory ***
[2026-04-20 19:08:39] total 459028
[2026-04-20 19:08:39] -rwx------. 1 boinc boinc     36322 Apr 18 10:55 runpilot2-wrapper.sh
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:06 queuedata.json
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc       100 Apr 20 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 19:08:39] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 16:29 run_atlas
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc       105 Apr 20 16:29 job.xml
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc 282763675 Apr 20 16:29 EVNT.49539591._000479.pool.root.1
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc      6539 Apr 20 16:29 init_data.xml
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc     15665 Apr 20 16:29 start_atlas.sh
[2026-04-20 19:08:39] drwxrwx--x. 2 boinc boinc      4096 Apr 20 16:29 shared
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc    656944 Apr 20 16:29 input.tar.gz
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc         0 Apr 20 16:29 boinc_lockfile
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc      2606 Apr 20 16:29 pandaJob.out
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc    997272 Apr 20 16:30 agis_schedconf.cvmfs.json
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc   1512404 Apr 20 16:30 agis_ddmendpoints.agis.ALL.json
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc       443 Apr 20 16:30 workernode_map.json
[2026-04-20 19:08:39] drwx------. 5 boinc boinc      4096 Apr 20 16:30 pilot3
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc 180879775 Apr 20 19:07 HITS.49545114._029715.pool.root.1
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc       487 Apr 20 19:07 boinc_task_state.xml
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc      1028 Apr 20 19:07 memory_monitor_summary.json
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc    280635 Apr 20 19:08 log.49545114._029715.job.log.tgz.1
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc      6370 Apr 20 19:08 heartbeat_new.json
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc      6261 Apr 20 19:08 heartbeat.json
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc        95 Apr 20 19:08 pilot_heartbeat.json
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc      8192 Apr 20 19:08 boinc_mmap_file
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc        27 Apr 20 19:08 wrapper_checkpoint.txt
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc      4902 Apr 20 19:08 pilotlog.txt
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc    886399 Apr 20 19:08 log.49545114._029715.job.log.1
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc       357 Apr 20 19:08 output.list
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc       410 Apr 20 19:08 runtime_log
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc   1187840 Apr 20 19:08 result.tar.gz
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc      8826 Apr 20 19:08 runtime_log.err
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc       663 Apr 20 19:08 471ece022b29.diag
[2026-04-20 19:08:39] -rw-r--r--. 1 boinc boinc     20710 Apr 20 19:08 stderr.txt
[2026-04-20 19:08:39] HITS file was successfully produced:
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc 180879775 Apr 20 19:07 shared/HITS.pool.root.1
[2026-04-20 19:08:39]  *** Contents of shared directory: ***
[2026-04-20 19:08:39] total 454612
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc 282763675 Apr 20 16:29 ATLAS.root_0
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc     15665 Apr 20 16:29 start_atlas.sh
[2026-04-20 19:08:39] -rw-r--r--. 2 boinc boinc    656944 Apr 20 16:29 input.tar.gz
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc 180879775 Apr 20 19:07 HITS.pool.root.1
[2026-04-20 19:08:39] -rw-------. 1 boinc boinc   1187840 Apr 20 19:08 result.tar.gz
19:08:41 (1027306): run_atlas exited; CPU time 36418.923671
19:08:41 (1027306): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN