Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:00:07 (1269976): wrapper (7.7.26015): starting
19:00:07 (1269976): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 19:00:07] Arguments: --nthreads 4
[2026-04-19 19:00:07] Threads: 4
[2026-04-19 19:00:07] Checking for CVMFS
[2026-04-19 19:00:07] No cvmfs_config command found, will try listing directly
[2026-04-19 19:00:07] CVMFS is ok
[2026-04-19 19:00:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 19:00:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 19:00:07] Further information can be found at the LHC@home message board.
[2026-04-19 19:00:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 19:00:07] Checking for apptainer binary...
[2026-04-19 19:00:07] which: no apptainer in ((null))
[2026-04-19 19:00:07] apptainer is not installed, using version from CVMFS
[2026-04-19 19:00:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 19:00:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-19 19:00:08] apptainer works
[2026-04-19 19:00:08] Set ATHENA_PROC_NUMBER=4
[2026-04-19 19:00:08] Set ATHENA_CORE_NUMBER=4
[2026-04-19 19:00:08] Starting ATLAS job with PandaID=7097849343
[2026-04-19 19:00:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 20:46:34]  *** The last 200 lines of the pilot log: ***
[2026-04-19 20:46:34] 2026-04-19 18:45:39,555 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,555 | INFO     | log transfer has been attempted: DONE
[2026-04-19 20:46:34] 2026-04-19 18:45:39,555 | INFO     | job 7097849343 has finished - writing final server update
[2026-04-19 20:46:34] 2026-04-19 18:45:39,555 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2554296/.job.ad'
[2026-04-19 20:46:34] 2026-04-19 18:45:39,555 | INFO     | total number of processed events: 400 (read)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,562 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7097849343/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,562 | INFO     | extracted standard info from prmon json
[2026-04-19 20:46:34] 2026-04-19 18:45:39,563 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 20:46:34] 2026-04-19 18:45:39,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 20:46:34] 2026-04-19 18:45:39,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 20:46:34] 2026-04-19 18:45:39,564 | INFO     | fitting pss+swap vs Time
[2026-04-19 20:46:34] 2026-04-19 18:45:39,564 | INFO     | sum of square deviations: 348769330.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,564 | INFO     | sum of deviations: 1636051506.5
[2026-04-19 20:46:34] 2026-04-19 18:45:39,564 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | mean y: 2308286.644230769
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | intersect: 2308286.644230769
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | chi2: 1.8858210591397662
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | sum of square deviations: 300842850.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | sum of deviations: 7709297608.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | mean y: 2326818.9393939395
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | intersect: 2326818.9393939395
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | chi2: 1.1186560882977168
[2026-04-19 20:46:34] 2026-04-19 18:45:39,565 | INFO     | current chi2=1.1186560882977168 (change=40.6806874450749 %)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | sum of square deviations: 257521107.5
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | sum of deviations: 7253840833.5
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | mean y: 2325214.6914893617
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | intersect: 2325214.6914893617
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | chi2: 1.121028950722293
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | current chi2=1.121028950722293 (change=-0.21211724044581698 %)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | right removable region: 93
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | sum of square deviations: 300842850.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,566 | INFO     | sum of deviations: -7955962515.000001
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | mean y: 2337809.626262626
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | intersect: 2337809.626262626
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | chi2: 0.8092472333052979
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | current chi2=0.8092472333052979 (change=57.08780377739321 %)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | sum of square deviations: 257521107.5
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | sum of deviations: -6438522031.5
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | mean y: 2332460.0319148935
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | intersect: 2332460.0319148935
[2026-04-19 20:46:34] 2026-04-19 18:45:39,567 | INFO     | chi2: 0.8067037256472053
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | current chi2=0.8067037256472053 (change=0.31430538819439724 %)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | left removable region: 10
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | sum of square deviations: 177275882.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | sum of deviations: -623820160.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | mean x (centered): 0.0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | mean y: 2354230.265060241
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | intersect: 2354230.265060241
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | chi2: 0.004802377376574023
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | current memory leak: -3.52 B/s (using 83 data points, chi2=0.00)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | could have reported an average CPU frequency of 3019 MHz (7 samples)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,568 | INFO     | ..............................
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . Timing measurements:
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . get job = 0 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . initial setup = 4 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . payload setup = 7 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . stage-in = 0 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . payload execution = 6293 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . stage-out = 0 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | . log creation = 0 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,569 | INFO     | ..............................
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | 
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | job summary report
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | --------------------------------------------------
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | PanDA job id: 7097849343
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | task id: 49545114
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | errors: (none)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | pilot state: finished 
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | transexitcode: 0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | exeerrorcode: 0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,618 | INFO     | exeerrordiag: 
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | exitcode: 0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | exitmsg: OK
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | cpuconsumptiontime: 24270 s
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | nevents: 400
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | neventsw: 0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | pid: 1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | pgrp: 1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | corecount: 4
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | event service: False
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | sizes: {0: 2281585, 1: 2283470, 12: 2283470, 6304: 2319594, 6307: 2319732}
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | --------------------------------------------------
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | 
[2026-04-19 20:46:34] 2026-04-19 18:45:39,619 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | job 7097849343 has completed (purged errors)
[2026-04-19 20:46:34] 2026-04-19 18:45:39,636 | INFO     | overall cleanup function is called
[2026-04-19 20:46:34] 2026-04-19 18:45:40,640 | INFO     | --- collectZombieJob: --- 10, [1278940]
[2026-04-19 20:46:34] 2026-04-19 18:45:40,640 | INFO     | zombie collector waiting for pid 1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:40,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 20:46:34] 2026-04-19 18:45:40,640 | INFO     | collected zombie processes
[2026-04-19 20:46:34] 2026-04-19 18:45:40,640 | INFO     | will attempt to kill all subprocesses of pid=1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:40,807 | INFO     | process IDs to be killed: [1278940] (in reverse order)
[2026-04-19 20:46:34] 2026-04-19 18:45:40,871 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 20:46:34] 2026-04-19 18:45:40,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 20:46:34] 2026-04-19 18:45:40,878 | INFO     | did not find any defunct processes belonging to 1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:40,883 | INFO     | did not find any defunct processes belonging to 1278940
[2026-04-19 20:46:34] 2026-04-19 18:45:40,883 | INFO     | Ready for new job
[2026-04-19 20:46:34] 2026-04-19 18:45:40,884 | INFO     | **************************************
[2026-04-19 20:46:34] 2026-04-19 18:45:40,885 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 20:46:34] 2026-04-19 18:45:40,885 | INFO     | **************************************
[2026-04-19 20:46:34] 2026-04-19 18:45:40,885 | INFO     | 
[2026-04-19 20:46:34] 2026-04-19 18:45:40,887 | INFO     | architecture information:
[2026-04-19 20:46:34] 2026-04-19 18:45:40,887 | INFO     | executing command: cat /etc/os-release
[2026-04-19 20:46:34] 2026-04-19 18:45:40,897 | INFO     | cat /etc/os-release:
[2026-04-19 20:46:34] NAME="CentOS Linux"
[2026-04-19 20:46:34] VERSION="7 (Core)"
[2026-04-19 20:46:34] ID="centos"
[2026-04-19 20:46:34] ID_LIKE="rhel fedora"
[2026-04-19 20:46:34] VERSION_ID="7"
[2026-04-19 20:46:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 20:46:34] ANSI_COLOR="0;31"
[2026-04-19 20:46:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 20:46:34] HOME_URL="https://www.centos.org/"
[2026-04-19 20:46:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 20:46:34] 
[2026-04-19 20:46:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 20:46:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 20:46:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 20:46:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 20:46:34] 
[2026-04-19 20:46:34] 2026-04-19 18:45:40,897 | INFO     | **************************************
[2026-04-19 20:46:34] 2026-04-19 18:45:41,400 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | INFO     | sufficient remaining disk space (40217083904 B)
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | INFO     | update_server=False
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 20:46:34] 2026-04-19 18:45:41,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 20:46:34] 2026-04-19 18:45:41,506 | INFO     | all data control threads have been joined
[2026-04-19 20:46:34] 2026-04-19 18:45:41,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 20:46:34] 2026-04-19 18:45:41,662 | INFO     | aborting loop
[2026-04-19 20:46:34] 2026-04-19 18:45:41,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 20:46:34] 2026-04-19 18:45:42,331 | INFO     | all payload control threads have been joined
[2026-04-19 20:46:34] 2026-04-19 18:45:42,417 | INFO     | [job] retrieve thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:42,417 | INFO     | [job] queue monitor thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:42,511 | INFO     | [data] control thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:42,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 20:46:34] 2026-04-19 18:45:42,667 | INFO     | [job] job monitor thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:42,889 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:42,996 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,017 | INFO     | all job control threads have been joined
[2026-04-19 20:46:34] 2026-04-19 18:45:43,221 | INFO     | [job] validate thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,296 | INFO     | [data] copytool_in thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,333 | INFO     | [payload] control thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,375 | INFO     | [payload] validate_post thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,510 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:43,769 | INFO     | [payload] failed_post thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:44,000 | INFO     | [data] copytool_out thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:44,023 | INFO     | [job] control thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:46,578 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:45:51,641 | INFO     | job.realtimelogging is not enabled
[2026-04-19 20:46:34] 2026-04-19 18:45:52,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 20:46:34] 2026-04-19 18:46:12,296 | INFO     | PID=1274124 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 20:46:34] 2026-04-19 18:46:12,296 | INFO     | .. there are 7 such processes running
[2026-04-19 20:46:34] 2026-04-19 18:46:12,297 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 20:46:34] 2026-04-19 18:46:12,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 20:46:34] 2026-04-19 18:46:12,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 20:46:34] 2026-04-19 18:46:27,617 | INFO     | [monitor] cgroup control has ended
[2026-04-19 20:46:34] 2026-04-19 18:46:29,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22486827390784)>', '<ExcThread(monitor, started 22486583609088)>']
[2026-04-19 20:46:34] 2026-04-19 18:46:30,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 20:46:34] 2026-04-19 18:46:30,389 | INFO     | [monitor] control thread has ended
[2026-04-19 20:46:34] 2026-04-19 18:46:34,422 | INFO     | all workflow threads have been joined
[2026-04-19 20:46:34] 2026-04-19 18:46:34,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 20:46:34] 2026-04-19 18:46:34,422 | INFO     | traces error code: 0
[2026-04-19 20:46:34] 2026-04-19 18:46:34,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 20:46:34] 2026-04-19 18:46:34,537 [wrapper] ==== pilot stdout END ====
[2026-04-19 20:46:34] 2026-04-19 18:46:34,539 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 20:46:34] 2026-04-19 18:46:34,542 [wrapper] pilotpid: 1274124
[2026-04-19 20:46:34] 2026-04-19 18:46:34,544 [wrapper] Pilot exit status: 0
[2026-04-19 20:46:34] 2026-04-19 18:46:34,552 [wrapper] pandaids: 7097849343
[2026-04-19 20:46:34] 2026-04-19 18:46:34,596 [wrapper] cleanup supervisor_pilot 1391235 1274125
[2026-04-19 20:46:34] 2026-04-19 18:46:34,599 [wrapper] Test setup, not cleaning
[2026-04-19 20:46:34] 2026-04-19 18:46:34,601 [wrapper] apfmon messages muted
[2026-04-19 20:46:34] 2026-04-19 18:46:34,603 [wrapper] ==== wrapper stdout END ====
[2026-04-19 20:46:34] 2026-04-19 18:46:34,604 [wrapper] ==== wrapper stderr END ====
[2026-04-19 20:46:34]  *** Error codes and diagnostics ***
[2026-04-19 20:46:34]     "exeErrorCode": 0,
[2026-04-19 20:46:34]     "pilotErrorCode": 0,
[2026-04-19 20:46:34]  *** Listing of results directory ***
[2026-04-19 20:46:34] total 456864
[2026-04-19 20:46:34] -rwx------. 1 boinc boinc     36322 Apr 18 10:55 runpilot2-wrapper.sh
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:06 queuedata.json
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc       100 Apr 19 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 20:46:34] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 19:00 run_atlas
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc       105 Apr 19 19:00 job.xml
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc      6482 Apr 19 19:00 init_data.xml
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc 280795129 Apr 19 19:00 EVNT.49539591._000470.pool.root.1
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc     15665 Apr 19 19:00 start_atlas.sh
[2026-04-19 20:46:34] drwxrwx--x. 2 boinc boinc      4096 Apr 19 19:00 shared
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc    656947 Apr 19 19:00 input.tar.gz
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc         0 Apr 19 19:00 boinc_lockfile
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc      2606 Apr 19 19:00 pandaJob.out
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc    997671 Apr 19 19:00 agis_schedconf.cvmfs.json
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc   1512404 Apr 19 19:00 agis_ddmendpoints.agis.ALL.json
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc       446 Apr 19 19:00 workernode_map.json
[2026-04-19 20:46:34] drwx------. 5 boinc boinc      4096 Apr 19 19:00 pilot3
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc 181226172 Apr 19 20:45 HITS.49545114._029552.pool.root.1
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc      1028 Apr 19 20:45 memory_monitor_summary.json
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc       487 Apr 19 20:45 boinc_task_state.xml
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc    251351 Apr 19 20:45 log.49545114._029552.job.log.tgz.1
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc      6407 Apr 19 20:45 heartbeat_new.json
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc      6298 Apr 19 20:45 heartbeat.json
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc      8192 Apr 19 20:46 boinc_mmap_file
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc        27 Apr 19 20:46 wrapper_checkpoint.txt
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc        95 Apr 19 20:46 pilot_heartbeat.json
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc      4899 Apr 19 20:46 pilotlog.txt
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc    622136 Apr 19 20:46 log.49545114._029552.job.log.1
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc       357 Apr 19 20:46 output.list
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc       410 Apr 19 20:46 runtime_log
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc    890880 Apr 19 20:46 result.tar.gz
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc      8826 Apr 19 20:46 runtime_log.err
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc       661 Apr 19 20:46 47143aeacfdb.diag
[2026-04-19 20:46:34] -rw-r--r--. 1 boinc boinc     20759 Apr 19 20:46 stderr.txt
[2026-04-19 20:46:34] HITS file was successfully produced:
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc 181226172 Apr 19 20:45 shared/HITS.pool.root.1
[2026-04-19 20:46:34]  *** Contents of shared directory: ***
[2026-04-19 20:46:34] total 452736
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc 280795129 Apr 19 19:00 ATLAS.root_0
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc     15665 Apr 19 19:00 start_atlas.sh
[2026-04-19 20:46:34] -rw-r--r--. 2 boinc boinc    656947 Apr 19 19:00 input.tar.gz
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc 181226172 Apr 19 20:45 HITS.pool.root.1
[2026-04-19 20:46:34] -rw-------. 1 boinc boinc    890880 Apr 19 20:46 result.tar.gz
20:46:35 (1269976): run_atlas exited; CPU time 24462.712569
20:46:35 (1269976): called boinc_finish(0)

</stderr_txt>
]]>

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