Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:33:59 (3287409): wrapper (7.7.26015): starting
05:33:59 (3287409): wrapper: running run_atlas (--nthreads 9)
[2026-04-18 05:33:59] Arguments: --nthreads 9
[2026-04-18 05:33:59] Threads: 9
[2026-04-18 05:33:59] Checking for CVMFS
[2026-04-18 05:34:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 05:34:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 05:34:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 05:34:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 05:34:01] 2.13.3.0 11035 138265 887288 158579 0 392 22859486 32935937 49155 16776704 0 1098457095 99.776 678826749 27318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-18 05:34:01] CVMFS is ok
[2026-04-18 05:34:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 05:34:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 05:34:01] Further information can be found at the LHC@home message board.
[2026-04-18 05:34:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 05:34:01] Checking for apptainer binary...
[2026-04-18 05:34:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 05:34:01] Running /usr/bin/apptainer --version
[2026-04-18 05:34:01] apptainer version 1.4.5-2.el9
[2026-04-18 05:34:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 05:34:02] lc-10-9.aglt2.org
[2026-04-18 05:34:02] apptainer works
[2026-04-18 05:34:02] Set ATHENA_PROC_NUMBER=9
[2026-04-18 05:34:02] Set ATHENA_CORE_NUMBER=9
[2026-04-18 05:34:02] Starting ATLAS job with PandaID=7097145137
[2026-04-18 05:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 10:08:10]  *** The last 200 lines of the pilot log: ***
[2026-04-18 10:08:10] 2026-04-18 14:07:28,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 10:08:10] 2026-04-18 14:07:28,428 | INFO     | fitting pss+swap vs Time
[2026-04-18 10:08:10] 2026-04-18 14:07:28,428 | INFO     | sum of square deviations: 5835827590.966181
[2026-04-18 10:08:10] 2026-04-18 14:07:28,430 | INFO     | sum of deviations: 74069444398.9323
[2026-04-18 10:08:10] 2026-04-18 14:07:28,454 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,455 | INFO     | mean y: 2544886.977443609
[2026-04-18 10:08:10] 2026-04-18 14:07:28,455 | INFO     | intersect: 2544886.977443609
[2026-04-18 10:08:10] 2026-04-18 14:07:28,455 | INFO     | chi2: 2.1294757397056343
[2026-04-18 10:08:10] 2026-04-18 14:07:28,456 | INFO     | sum of square deviations: 5512912347.249024
[2026-04-18 10:08:10] 2026-04-18 14:07:28,458 | INFO     | sum of deviations: 72043520572.5786
[2026-04-18 10:08:10] 2026-04-18 14:07:28,458 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,458 | INFO     | mean y: 2543931.157088123
[2026-04-18 10:08:10] 2026-04-18 14:07:28,458 | INFO     | intersect: 2543931.157088123
[2026-04-18 10:08:10] 2026-04-18 14:07:28,483 | INFO     | chi2: 2.130263185285354
[2026-04-18 10:08:10] 2026-04-18 14:07:28,483 | INFO     | current chi2=2.130263185285354 (change=-0.036978377590181445 %)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,483 | INFO     | right removable region: 260
[2026-04-18 10:08:10] 2026-04-18 14:07:28,483 | INFO     | sum of square deviations: 5512833047.249026
[2026-04-18 10:08:10] 2026-04-18 14:07:28,485 | INFO     | sum of deviations: 16502700561.486593
[2026-04-18 10:08:10] 2026-04-18 14:07:28,485 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,486 | INFO     | mean y: 2571925.9731800766
[2026-04-18 10:08:10] 2026-04-18 14:07:28,486 | INFO     | intersect: 2571925.9731800766
[2026-04-18 10:08:10] 2026-04-18 14:07:28,486 | INFO     | chi2: 0.12960599088679844
[2026-04-18 10:08:10] 2026-04-18 14:07:28,486 | INFO     | current chi2=0.12960599088679844 (change=93.91371366810151 %)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,511 | INFO     | sum of square deviations: 5201978265.984375
[2026-04-18 10:08:10] 2026-04-18 14:07:28,513 | INFO     | sum of deviations: 2063052107.8203125
[2026-04-18 10:08:10] 2026-04-18 14:07:28,513 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,513 | INFO     | mean y: 2578999.58984375
[2026-04-18 10:08:10] 2026-04-18 14:07:28,513 | INFO     | intersect: 2578999.58984375
[2026-04-18 10:08:10] 2026-04-18 14:07:28,513 | INFO     | chi2: 0.02905974346139809
[2026-04-18 10:08:10] 2026-04-18 14:07:28,514 | INFO     | current chi2=0.02905974346139809 (change=77.57839490091189 %)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,514 | INFO     | sum of square deviations: 4903062402.725095
[2026-04-18 10:08:10] 2026-04-18 14:07:28,540 | INFO     | sum of deviations: -1502299091.2908359
[2026-04-18 10:08:10] 2026-04-18 14:07:28,540 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,540 | INFO     | mean y: 2580794.916334661
[2026-04-18 10:08:10] 2026-04-18 14:07:28,540 | INFO     | intersect: 2580794.916334661
[2026-04-18 10:08:10] 2026-04-18 14:07:28,541 | INFO     | chi2: 0.010975721736719955
[2026-04-18 10:08:10] 2026-04-18 14:07:28,541 | INFO     | current chi2=0.010975721736719955 (change=62.23049335827859 %)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,541 | INFO     | sum of square deviations: 4615820812.963427
[2026-04-18 10:08:10] 2026-04-18 14:07:28,567 | INFO     | sum of deviations: -228967549.426832
[2026-04-18 10:08:10] 2026-04-18 14:07:28,567 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,567 | INFO     | mean y: 2580117.1422764226
[2026-04-18 10:08:10] 2026-04-18 14:07:28,567 | INFO     | intersect: 2580117.1422764226
[2026-04-18 10:08:10] 2026-04-18 14:07:28,568 | INFO     | chi2: 0.010165180699252508
[2026-04-18 10:08:10] 2026-04-18 14:07:28,568 | INFO     | current chi2=0.010165180699252508 (change=7.384854107185792 %)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,568 | INFO     | left removable region: 20
[2026-04-18 10:08:10] 2026-04-18 14:07:28,569 | INFO     | sum of square deviations: 4286270049.8500013
[2026-04-18 10:08:10] 2026-04-18 14:07:28,570 | INFO     | sum of deviations: -866548826.9999995
[2026-04-18 10:08:10] 2026-04-18 14:07:28,570 | INFO     | mean x (centered): 0.0
[2026-04-18 10:08:10] 2026-04-18 14:07:28,639 | INFO     | mean y: 2579764.5
[2026-04-18 10:08:10] 2026-04-18 14:07:28,639 | INFO     | intersect: 2579764.5
[2026-04-18 10:08:10] 2026-04-18 14:07:28,639 | INFO     | chi2: 0.009921066301683868
[2026-04-18 10:08:10] 2026-04-18 14:07:28,640 | INFO     | current memory leak: -0.20 B/s (using 240 data points, chi2=0.01)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,640 | INFO     | could have reported an average CPU frequency of 2735 MHz (13 samples)
[2026-04-18 10:08:10] 2026-04-18 14:07:28,640 | INFO     | ..............................
[2026-04-18 10:08:10] 2026-04-18 14:07:28,640 | INFO     | . Timing measurements:
[2026-04-18 10:08:10] 2026-04-18 14:07:28,640 | INFO     | . get job = 0 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . initial setup = 27 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . payload setup = 56 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . stage-in = 0 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . payload execution = 16246 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . stage-out = 3 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | . log creation = 0 s
[2026-04-18 10:08:10] 2026-04-18 14:07:28,641 | INFO     | ..............................
[2026-04-18 10:08:10] 2026-04-18 14:07:30,286 | INFO     | 
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | job summary report
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | --------------------------------------------------
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | PanDA job id: 7097145137
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | task id: 49545114
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | errors: (none)
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | pilot state: finished 
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | transexitcode: 0
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | exeerrorcode: 0
[2026-04-18 10:08:10] 2026-04-18 14:07:30,287 | INFO     | exeerrordiag: 
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | exitcode: 0
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | exitmsg: OK
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | cpuconsumptiontime: 42803 s
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | nevents: 400
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | neventsw: 0
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | pid: 3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | pgrp: 3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | corecount: 9
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | event service: False
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | sizes: {0: 2281569, 1: 2281653, 2: 2257490, 3: 2283510, 14: 2283510, 16306: 2314978, 16307: 2315105, 16311: 2324159, 16314: 2324215, 16317: 2324409}
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | --------------------------------------------------
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | 
[2026-04-18 10:08:10] 2026-04-18 14:07:30,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 10:08:10] 2026-04-18 14:07:30,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 10:08:10] 2026-04-18 14:07:30,369 | INFO     | job 7097145137 has completed (purged errors)
[2026-04-18 10:08:10] 2026-04-18 14:07:30,369 | INFO     | overall cleanup function is called
[2026-04-18 10:08:10] 2026-04-18 14:07:31,386 | INFO     | --- collectZombieJob: --- 10, [3300808]
[2026-04-18 10:08:10] 2026-04-18 14:07:31,387 | INFO     | zombie collector waiting for pid 3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:31,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 10:08:10] 2026-04-18 14:07:31,387 | INFO     | collected zombie processes
[2026-04-18 10:08:10] 2026-04-18 14:07:31,387 | INFO     | will attempt to kill all subprocesses of pid=3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:35,169 | INFO     | PID=3294431 has CPU usage=19.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-18 10:08:10] 2026-04-18 14:07:35,169 | INFO     | .. there are 80 such processes running
[2026-04-18 10:08:10] 2026-04-18 14:07:36,075 | INFO     | process IDs to be killed: [3300808] (in reverse order)
[2026-04-18 10:08:10] 2026-04-18 14:07:36,431 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 10:08:10] 2026-04-18 14:07:36,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 10:08:10] 2026-04-18 14:07:36,539 | INFO     | did not find any defunct processes belonging to 3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:36,597 | INFO     | did not find any defunct processes belonging to 3300808
[2026-04-18 10:08:10] 2026-04-18 14:07:36,602 | INFO     | Ready for new job
[2026-04-18 10:08:10] 2026-04-18 14:07:36,603 | INFO     | **************************************
[2026-04-18 10:08:10] 2026-04-18 14:07:36,603 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 10:08:10] 2026-04-18 14:07:36,603 | INFO     | **************************************
[2026-04-18 10:08:10] 2026-04-18 14:07:36,604 | INFO     | 
[2026-04-18 10:08:10] 2026-04-18 14:07:36,612 | INFO     | architecture information:
[2026-04-18 10:08:10] 2026-04-18 14:07:36,618 | INFO     | executing command: cat /etc/os-release
[2026-04-18 10:08:10] 2026-04-18 14:07:36,672 | INFO     | cat /etc/os-release:
[2026-04-18 10:08:10] NAME="CentOS Linux"
[2026-04-18 10:08:10] VERSION="7 (Core)"
[2026-04-18 10:08:10] ID="centos"
[2026-04-18 10:08:10] ID_LIKE="rhel fedora"
[2026-04-18 10:08:10] VERSION_ID="7"
[2026-04-18 10:08:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 10:08:10] ANSI_COLOR="0;31"
[2026-04-18 10:08:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 10:08:10] HOME_URL="https://www.centos.org/"
[2026-04-18 10:08:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 10:08:10] 
[2026-04-18 10:08:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 10:08:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 10:08:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 10:08:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 10:08:10] 
[2026-04-18 10:08:10] 2026-04-18 14:07:36,672 | INFO     | **************************************
[2026-04-18 10:08:10] 2026-04-18 14:07:37,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-18 10:08:10] 2026-04-18 14:07:37,296 | INFO     | sufficient remaining disk space (93860134912 B)
[2026-04-18 10:08:10] 2026-04-18 14:07:37,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 10:08:10] 2026-04-18 14:07:37,297 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 10:08:10] 2026-04-18 14:07:37,297 | INFO     | update_server=False
[2026-04-18 10:08:10] 2026-04-18 14:07:37,297 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 10:08:10] 2026-04-18 14:07:37,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 10:08:10] 2026-04-18 14:07:37,815 | INFO     | all data control threads have been joined
[2026-04-18 10:08:10] 2026-04-18 14:07:38,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 10:08:10] 2026-04-18 14:07:38,090 | INFO     | aborting loop
[2026-04-18 10:08:10] 2026-04-18 14:07:38,113 | INFO     | all payload control threads have been joined
[2026-04-18 10:08:10] 2026-04-18 14:07:38,303 | INFO     | [job] retrieve thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:38,318 | INFO     | all job control threads have been joined
[2026-04-18 10:08:10] 2026-04-18 14:07:38,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 10:08:10] 2026-04-18 14:07:38,532 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:38,821 | INFO     | [data] control thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:38,851 | INFO     | [payload] failed_post thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:38,989 | INFO     | [data] copytool_in thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,096 | INFO     | [job] job monitor thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,119 | INFO     | [payload] control thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,147 | INFO     | [job] validate thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,149 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,325 | INFO     | [job] control thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 10:08:10] 2026-04-18 14:07:39,482 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,653 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,657 | INFO     | [data] copytool_out thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:39,843 | INFO     | [payload] validate_post thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:40,353 | INFO     | [job] queue monitor thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:42,426 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 10:08:10] 2026-04-18 14:07:48,582 | INFO     | [monitor] cgroup control has ended
[2026-04-18 10:08:10] 2026-04-18 14:07:49,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475795236672)>', '<ExcThread(monitor, started 140475361130240)>']
[2026-04-18 10:08:10] 2026-04-18 14:07:54,452 | INFO     | all workflow threads have been joined
[2026-04-18 10:08:10] 2026-04-18 14:07:54,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 10:08:10] 2026-04-18 14:07:54,452 | INFO     | traces error code: 0
[2026-04-18 10:08:10] 2026-04-18 14:07:54,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 10:08:10] 2026-04-18 14:08:08,656 | INFO     | PID=3294431 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | INFO     | .. there are 80 such processes running
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | CRITICAL | thread 'MainThread' is not alive
[2026-04-18 10:08:10] 2026-04-18 14:08:08,657 | INFO     | [monitor] control thread has ended
[2026-04-18 10:08:10] 2026-04-18 14:08:09,162 [wrapper] ==== pilot stdout END ====
[2026-04-18 10:08:10] 2026-04-18 14:08:09,181 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 10:08:10] 2026-04-18 14:08:09,218 [wrapper] pilotpid: 3294431
[2026-04-18 10:08:10] 2026-04-18 14:08:09,235 [wrapper] Pilot exit status: 0
[2026-04-18 10:08:10] 2026-04-18 14:08:09,363 [wrapper] pandaids: 7097145137
[2026-04-18 10:08:10] 2026-04-18 14:08:09,831 [wrapper] cleanup supervisor_pilot  517582 3294432
[2026-04-18 10:08:10] 2026-04-18 14:08:09,854 [wrapper] Test setup, not cleaning
[2026-04-18 10:08:10] 2026-04-18 14:08:09,871 [wrapper] apfmon messages muted
[2026-04-18 10:08:10] 2026-04-18 14:08:09,887 [wrapper] ==== wrapper stdout END ====
[2026-04-18 10:08:10] 2026-04-18 14:08:09,916 [wrapper] ==== wrapper stderr END ====
[2026-04-18 10:08:10]  *** Error codes and diagnostics ***
[2026-04-18 10:08:10]     "exeErrorCode": 0,
[2026-04-18 10:08:10]     "pilotErrorCode": 0,
[2026-04-18 10:08:10]  *** Listing of results directory ***
[2026-04-18 10:08:10] total 459676
[2026-04-18 10:08:10] -rwx------. 1 boincer umatlas     36322 Apr 18 03:17 runpilot2-wrapper.sh
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 03:21 pilot3.tar.gz
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 03:31 queuedata.json
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas       100 Apr 18 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 10:08:10] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 05:33 run_atlas
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas       105 Apr 18 05:33 job.xml
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas 280460387 Apr 18 05:33 EVNT.49539591._000230.pool.root.1
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 05:33 start_atlas.sh
[2026-04-18 10:08:10] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 05:33 shared
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas    656939 Apr 18 05:33 input.tar.gz
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas         0 Apr 18 05:33 boinc_lockfile
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas      2603 Apr 18 05:34 pandaJob.out
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas        57 Apr 18 05:34 setup.sh.local
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas    997949 Apr 18 05:34 agis_schedconf.cvmfs.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas       436 Apr 18 05:35 workernode_map.json
[2026-04-18 10:08:10] drwx------. 5 boincer umatlas      4096 Apr 18 05:35 pilot3
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas      6781 Apr 18 10:00 init_data.xml
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas 182918004 Apr 18 10:06 HITS.49545114._024262.pool.root.1
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas       488 Apr 18 10:06 boinc_task_state.xml
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas      1045 Apr 18 10:07 memory_monitor_summary.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas   1512404 Apr 18 10:07 agis_ddmendpoints.agis.ALL.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas    422794 Apr 18 10:07 log.49545114._024262.job.log.tgz.1
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas      6399 Apr 18 10:07 heartbeat_new.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas      6290 Apr 18 10:07 heartbeat.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas        95 Apr 18 10:07 pilot_heartbeat.json
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas       893 Apr 18 10:08 pilotlog.txt
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 10:08 boinc_mmap_file
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas   1213054 Apr 18 10:08 log.49545114._024262.job.log.1
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas        28 Apr 18 10:08 wrapper_checkpoint.txt
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas       357 Apr 18 10:08 output.list
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas       410 Apr 18 10:08 runtime_log
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas   1648640 Apr 18 10:08 result.tar.gz
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas      8959 Apr 18 10:08 runtime_log.err
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas       654 Apr 18 10:08 30010f427d08.diag
[2026-04-18 10:08:10] -rw-r--r--. 1 boincer umatlas     20990 Apr 18 10:08 stderr.txt
[2026-04-18 10:08:10] HITS file was successfully produced:
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas 182918004 Apr 18 10:06 shared/HITS.pool.root.1
[2026-04-18 10:08:10]  *** Contents of shared directory: ***
[2026-04-18 10:08:10] total 454800
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas 280460387 Apr 18 05:33 ATLAS.root_0
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 05:33 start_atlas.sh
[2026-04-18 10:08:10] -rw-r--r--. 2 boincer umatlas    656939 Apr 18 05:33 input.tar.gz
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas 182918004 Apr 18 10:06 HITS.pool.root.1
[2026-04-18 10:08:10] -rw-------. 1 boincer umatlas   1648640 Apr 18 10:08 result.tar.gz
10:08:12 (3287409): run_atlas exited; CPU time 43837.833658
10:08:12 (3287409): called boinc_finish(0)

</stderr_txt>
]]>

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