Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:52:56 (2126408): wrapper (7.7.26015): starting
00:52:56 (2126408): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 00:52:56] Arguments: --nthreads 4
[2026-04-20 00:52:56] Threads: 4
[2026-04-20 00:52:56] Checking for CVMFS
[2026-04-20 00:52:56] No cvmfs_config command found, will try listing directly
[2026-04-20 00:52:56] CVMFS is ok
[2026-04-20 00:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 00:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 00:52:56] Further information can be found at the LHC@home message board.
[2026-04-20 00:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 00:52:56] Checking for apptainer binary...
[2026-04-20 00:52:56] which: no apptainer in ((null))
[2026-04-20 00:52:56] apptainer is not installed, using version from CVMFS
[2026-04-20 00:52:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 00:52:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-20 00:52:57] apptainer works
[2026-04-20 00:52:57] Set ATHENA_PROC_NUMBER=4
[2026-04-20 00:52:57] Set ATHENA_CORE_NUMBER=4
[2026-04-20 00:52:57] Starting ATLAS job with PandaID=7097829252
[2026-04-20 00:52:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 02:55:33]  *** The last 200 lines of the pilot log: ***
[2026-04-20 02:55:33] 2026-04-20 00:54:39,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,185 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-20 02:55:33] 2026-04-20 00:54:40,501 | INFO     | job 7097829252 has state=finished
[2026-04-20 02:55:33] 2026-04-20 00:54:40,502 | INFO     | preparing for final server update for job 7097829252 in state='finished'
[2026-04-20 02:55:33] 2026-04-20 00:54:40,502 | INFO     | reading metadata from: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7097829252/jobReport.json
[2026-04-20 02:55:33] 2026-04-20 00:54:40,504 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot124/slots/0/workernode_map.json
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | INFO     | this job has now completed (state=finished)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | INFO     | log transfer has been attempted: DONE
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | INFO     | job 7097829252 has finished - writing final server update
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3080111/.job.ad'
[2026-04-20 02:55:33] 2026-04-20 00:54:40,505 | INFO     | total number of processed events: 400 (read)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,525 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7097829252/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,526 | INFO     | extracted standard info from prmon json
[2026-04-20 02:55:33] 2026-04-20 00:54:40,526 | INFO     | extracted standard memory fields from prmon json
[2026-04-20 02:55:33] 2026-04-20 00:54:40,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-20 02:55:33] 2026-04-20 00:54:40,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-20 02:55:33] 2026-04-20 00:54:40,528 | INFO     | fitting pss+swap vs Time
[2026-04-20 02:55:33] 2026-04-20 00:54:40,529 | INFO     | sum of square deviations: 522502820.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,529 | INFO     | sum of deviations: 14161562909.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,529 | INFO     | mean x (centered): 0.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,529 | INFO     | mean y: 2323114.100840336
[2026-04-20 02:55:33] 2026-04-20 00:54:40,529 | INFO     | intersect: 2323114.100840336
[2026-04-20 02:55:33] 2026-04-20 00:54:40,530 | INFO     | chi2: 1.322331136737775
[2026-04-20 02:55:33] 2026-04-20 00:54:40,530 | INFO     | sum of square deviations: 459366752.5
[2026-04-20 02:55:33] 2026-04-20 00:54:40,530 | INFO     | sum of deviations: 13485964546.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,530 | INFO     | mean x (centered): 0.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,530 | INFO     | mean y: 2321481.3684210526
[2026-04-20 02:55:33] 2026-04-20 00:54:40,531 | INFO     | intersect: 2321481.3684210526
[2026-04-20 02:55:33] 2026-04-20 00:54:40,531 | INFO     | chi2: 1.324275296131061
[2026-04-20 02:55:33] 2026-04-20 00:54:40,531 | INFO     | current chi2=1.324275296131061 (change=-0.1470251542349946 %)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,531 | INFO     | right removable region: 113
[2026-04-20 02:55:33] 2026-04-20 00:54:40,531 | INFO     | sum of square deviations: 459366752.5
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | sum of deviations: -820257422.9999999
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | mean x (centered): 0.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | mean y: 2358524.035087719
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | intersect: 2358524.035087719
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | chi2: 0.001921617632667903
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | current chi2=0.001921617632667903 (change=99.85467954438336 %)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,532 | INFO     | sum of square deviations: 401533110.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | sum of deviations: -762962258.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | mean x (centered): 0.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | mean y: 2358358.5688073393
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | intersect: 2358358.5688073393
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | chi2: 0.0017473251228142615
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | current chi2=0.0017473251228142615 (change=9.070093180382623 %)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | left removable region: 10
[2026-04-20 02:55:33] 2026-04-20 00:54:40,533 | INFO     | sum of square deviations: 338804492.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | sum of deviations: -802612319.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | mean x (centered): 0.0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | mean y: 2358242.86407767
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | intersect: 2358242.86407767
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | chi2: 0.0016610724994793645
[2026-04-20 02:55:33] 2026-04-20 00:54:40,534 | INFO     | current memory leak: -2.37 B/s (using 103 data points, chi2=0.00)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | could have reported an average CPU frequency of 2758 MHz (8 samples)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | ..............................
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . Timing measurements:
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . get job = 0 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . initial setup = 6 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . payload setup = 13 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . stage-in = 0 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . payload execution = 7253 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . stage-out = 0 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | . log creation = 0 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,535 | INFO     | ..............................
[2026-04-20 02:55:33] 2026-04-20 00:54:40,941 | INFO     | 
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | job summary report
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | --------------------------------------------------
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | PanDA job id: 7097829252
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | task id: 49545114
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | errors: (none)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | pilot state: finished 
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | transexitcode: 0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | exeerrorcode: 0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,942 | INFO     | exeerrordiag: 
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | exitcode: 0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | exitmsg: OK
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | cpuconsumptiontime: 27502 s
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | nevents: 400
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | neventsw: 0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | pid: 2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | pgrp: 2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | corecount: 4
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | event service: False
[2026-04-20 02:55:33] 2026-04-20 00:54:40,943 | INFO     | sizes: {0: 2281640, 1: 2283469, 11: 2283469, 7270: 2311050, 7272: 2320072, 7273: 2320128, 7274: 2320450}
[2026-04-20 02:55:33] 2026-04-20 00:54:40,944 | INFO     | --------------------------------------------------
[2026-04-20 02:55:33] 2026-04-20 00:54:40,944 | INFO     | 
[2026-04-20 02:55:33] 2026-04-20 00:54:40,944 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-04-20 02:55:33] 2026-04-20 00:54:40,975 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | job 7097829252 has completed (purged errors)
[2026-04-20 02:55:33] 2026-04-20 00:54:40,978 | INFO     | overall cleanup function is called
[2026-04-20 02:55:33] 2026-04-20 00:54:41,988 | INFO     | --- collectZombieJob: --- 10, [2137121]
[2026-04-20 02:55:33] 2026-04-20 00:54:41,988 | INFO     | zombie collector waiting for pid 2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:41,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 02:55:33] 2026-04-20 00:54:41,988 | INFO     | collected zombie processes
[2026-04-20 02:55:33] 2026-04-20 00:54:41,988 | INFO     | will attempt to kill all subprocesses of pid=2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:42,617 | INFO     | process IDs to be killed: [2137121] (in reverse order)
[2026-04-20 02:55:33] 2026-04-20 00:54:42,850 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 02:55:33] 2026-04-20 00:54:42,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 02:55:33] 2026-04-20 00:54:42,874 | INFO     | did not find any defunct processes belonging to 2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:42,894 | INFO     | did not find any defunct processes belonging to 2137121
[2026-04-20 02:55:33] 2026-04-20 00:54:42,894 | INFO     | Ready for new job
[2026-04-20 02:55:33] 2026-04-20 00:54:42,896 | INFO     | **************************************
[2026-04-20 02:55:33] 2026-04-20 00:54:42,896 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 02:55:33] 2026-04-20 00:54:42,896 | INFO     | **************************************
[2026-04-20 02:55:33] 2026-04-20 00:54:42,896 | INFO     | 
[2026-04-20 02:55:33] 2026-04-20 00:54:42,904 | INFO     | architecture information:
[2026-04-20 02:55:33] 2026-04-20 00:54:42,904 | INFO     | executing command: cat /etc/os-release
[2026-04-20 02:55:33] 2026-04-20 00:54:42,928 | INFO     | cat /etc/os-release:
[2026-04-20 02:55:33] NAME="CentOS Linux"
[2026-04-20 02:55:33] VERSION="7 (Core)"
[2026-04-20 02:55:33] ID="centos"
[2026-04-20 02:55:33] ID_LIKE="rhel fedora"
[2026-04-20 02:55:33] VERSION_ID="7"
[2026-04-20 02:55:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 02:55:33] ANSI_COLOR="0;31"
[2026-04-20 02:55:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 02:55:33] HOME_URL="https://www.centos.org/"
[2026-04-20 02:55:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 02:55:33] 
[2026-04-20 02:55:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 02:55:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 02:55:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 02:55:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 02:55:33] 
[2026-04-20 02:55:33] 2026-04-20 00:54:42,929 | INFO     | **************************************
[2026-04-20 02:55:33] 2026-04-20 00:54:43,432 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-04-20 02:55:33] 2026-04-20 00:54:43,456 | INFO     | sufficient remaining disk space (162622603264 B)
[2026-04-20 02:55:33] 2026-04-20 00:54:43,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 02:55:33] 2026-04-20 00:54:43,457 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 02:55:33] 2026-04-20 00:54:43,457 | INFO     | update_server=False
[2026-04-20 02:55:33] 2026-04-20 00:54:43,457 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 02:55:33] 2026-04-20 00:54:43,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 02:55:33] 2026-04-20 00:54:43,506 | INFO     | aborting loop
[2026-04-20 02:55:33] 2026-04-20 00:54:43,778 | INFO     | all data control threads have been joined
[2026-04-20 02:55:33] 2026-04-20 00:54:44,462 | INFO     | [job] retrieve thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:44,468 | INFO     | [data] copytool_in thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:44,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 02:55:33] 2026-04-20 00:54:44,512 | INFO     | [job] job monitor thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:44,638 | INFO     | all payload control threads have been joined
[2026-04-20 02:55:33] 2026-04-20 00:54:44,682 | INFO     | [payload] validate_post thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:44,784 | INFO     | [data] control thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:44,793 | INFO     | [payload] failed_post thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:45,089 | INFO     | all job control threads have been joined
[2026-04-20 02:55:33] 2026-04-20 00:54:45,146 | INFO     | [job] validate thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:45,486 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:45,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 02:55:33] 2026-04-20 00:54:45,643 | INFO     | [payload] control thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:45,684 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:45,758 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:46,094 | INFO     | [job] control thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:46,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 02:55:33] 2026-04-20 00:54:46,507 | INFO     | [data] copytool_out thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:46,634 | INFO     | [job] queue monitor thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:50,264 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:54:54,334 | INFO     | job.realtimelogging is not enabled
[2026-04-20 02:55:33] 2026-04-20 00:54:55,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 02:55:33] 2026-04-20 00:55:14,266 | INFO     | PID=2131935 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 02:55:33] 2026-04-20 00:55:14,266 | INFO     | .. there are 19 such processes running
[2026-04-20 02:55:33] 2026-04-20 00:55:14,266 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 02:55:33] 2026-04-20 00:55:14,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 02:55:33] 2026-04-20 00:55:14,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 02:55:33] 2026-04-20 00:55:26,549 | INFO     | [monitor] cgroup control has ended
[2026-04-20 02:55:33] 2026-04-20 00:55:27,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22843434821440)>', '<ExcThread(monitor, started 22843193829120)>']
[2026-04-20 02:55:33] 2026-04-20 00:55:28,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 02:55:33] 2026-04-20 00:55:28,337 | INFO     | [monitor] control thread has ended
[2026-04-20 02:55:33] 2026-04-20 00:55:32,739 | INFO     | all workflow threads have been joined
[2026-04-20 02:55:33] 2026-04-20 00:55:32,740 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 02:55:33] 2026-04-20 00:55:32,740 | INFO     | traces error code: 0
[2026-04-20 02:55:33] 2026-04-20 00:55:32,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 02:55:33] 2026-04-20 00:55:32,903 [wrapper] ==== pilot stdout END ====
[2026-04-20 02:55:33] 2026-04-20 00:55:32,907 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 02:55:33] 2026-04-20 00:55:32,910 [wrapper] pilotpid: 2131935
[2026-04-20 02:55:33] 2026-04-20 00:55:32,913 [wrapper] Pilot exit status: 0
[2026-04-20 02:55:33] 2026-04-20 00:55:32,927 [wrapper] pandaids: 7097829252
[2026-04-20 02:55:33] 2026-04-20 00:55:33,075 [wrapper] cleanup supervisor_pilot 2443046 2131936
[2026-04-20 02:55:33] 2026-04-20 00:55:33,079 [wrapper] Test setup, not cleaning
[2026-04-20 02:55:33] 2026-04-20 00:55:33,082 [wrapper] apfmon messages muted
[2026-04-20 02:55:33] 2026-04-20 00:55:33,086 [wrapper] ==== wrapper stdout END ====
[2026-04-20 02:55:33] 2026-04-20 00:55:33,090 [wrapper] ==== wrapper stderr END ====
[2026-04-20 02:55:33]  *** Error codes and diagnostics ***
[2026-04-20 02:55:33]     "exeErrorCode": 0,
[2026-04-20 02:55:33]     "pilotErrorCode": 0,
[2026-04-20 02:55:33]  *** Listing of results directory ***
[2026-04-20 02:55:33] total 465872
[2026-04-20 02:55:33] -rwx------. 1 boinc boinc     36322 Apr 18 10:46 runpilot2-wrapper.sh
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:02 queuedata.json
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc       100 Apr 20 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 02:55:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 00:52 run_atlas
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc       105 Apr 20 00:52 job.xml
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc 284645915 Apr 20 00:52 EVNT.49539591._000466.pool.root.1
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc      6542 Apr 20 00:52 init_data.xml
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc     15665 Apr 20 00:52 start_atlas.sh
[2026-04-20 02:55:33] drwxrwx--x. 2 boinc boinc      4096 Apr 20 00:52 shared
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc    656941 Apr 20 00:52 input.tar.gz
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc         0 Apr 20 00:52 boinc_lockfile
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc      2605 Apr 20 00:52 pandaJob.out
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc    997737 Apr 20 00:53 agis_schedconf.cvmfs.json
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc   1512404 Apr 20 00:53 agis_ddmendpoints.agis.ALL.json
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc       444 Apr 20 00:53 workernode_map.json
[2026-04-20 02:55:33] drwx------. 5 boinc boinc      4096 Apr 20 00:53 pilot3
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc 186439686 Apr 20 02:54 HITS.49545114._029496.pool.root.1
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc       487 Apr 20 02:54 boinc_task_state.xml
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc      1021 Apr 20 02:54 memory_monitor_summary.json
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc    256576 Apr 20 02:54 log.49545114._029496.job.log.tgz.1
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc      6360 Apr 20 02:54 heartbeat_new.json
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc      6251 Apr 20 02:54 heartbeat.json
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc        95 Apr 20 02:54 pilot_heartbeat.json
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc      8192 Apr 20 02:55 boinc_mmap_file
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc        27 Apr 20 02:55 wrapper_checkpoint.txt
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc      4902 Apr 20 02:55 pilotlog.txt
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc    694353 Apr 20 02:55 log.49545114._029496.job.log.1
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc       357 Apr 20 02:55 output.list
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc       410 Apr 20 02:55 runtime_log
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc    972800 Apr 20 02:55 result.tar.gz
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc      8843 Apr 20 02:55 runtime_log.err
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc       662 Apr 20 02:55 44e6bc262458.diag
[2026-04-20 02:55:33] -rw-r--r--. 1 boinc boinc     21062 Apr 20 02:55 stderr.txt
[2026-04-20 02:55:33] HITS file was successfully produced:
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc 186439686 Apr 20 02:54 shared/HITS.pool.root.1
[2026-04-20 02:55:33]  *** Contents of shared directory: ***
[2026-04-20 02:55:33] total 461668
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc 284645915 Apr 20 00:52 ATLAS.root_0
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc     15665 Apr 20 00:52 start_atlas.sh
[2026-04-20 02:55:33] -rw-r--r--. 2 boinc boinc    656941 Apr 20 00:52 input.tar.gz
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc 186439686 Apr 20 02:54 HITS.pool.root.1
[2026-04-20 02:55:33] -rw-------. 1 boinc boinc    972800 Apr 20 02:55 result.tar.gz
02:55:34 (2126408): run_atlas exited; CPU time 27849.887406
02:55:34 (2126408): called boinc_finish(0)

</stderr_txt>
]]>

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