Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-18 13:26:17 (1813988): vboxwrapper version 26210
2026-04-18 13:26:17 (1813988): BOINC client version: 8.2.8
2026-04-18 13:26:17 (1813988): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-18 13:26:18 (1813988): Successfully copied 'init_data.xml' to the shared directory.
2026-04-18 13:26:18 (1813988): Create VM. (boinc_da231a15cc563206, slot#6)
2026-04-18 13:26:18 (1813988): Setting Memory Size for VM. (4300MB)
2026-04-18 13:26:18 (1813988): Setting CPU Count for VM. (3)
2026-04-18 13:26:18 (1813988): Setting Chipset Options for VM.
2026-04-18 13:26:18 (1813988): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-18 13:26:18 (1813988): Setting Boot Options for VM.
2026-04-18 13:26:18 (1813988): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-18 13:26:18 (1813988): Enabling VM Network Access.
2026-04-18 13:26:18 (1813988): Disabling USB Support for VM.
2026-04-18 13:26:18 (1813988): Disabling COM Port Support for VM.
2026-04-18 13:26:19 (1813988): Disabling LPT Port Support for VM.
2026-04-18 13:26:19 (1813988): Disabling Audio Support for VM.
2026-04-18 13:26:19 (1813988): Disabling Clipboard Support for VM.
2026-04-18 13:26:19 (1813988): Disabling Drag and Drop Support for VM.
2026-04-18 13:26:19 (1813988): Adding storage controller(s) to VM.
2026-04-18 13:26:19 (1813988): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-18 13:26:19 (1813988): Adding VirtualBox Guest Additions to VM.
2026-04-18 13:26:19 (1813988): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-18 13:26:19 (1813988): forwarding host port 60939 to guest port 80
2026-04-18 13:26:20 (1813988): Enabling remote desktop for VM.
2026-04-18 13:26:20 (1813988): Required extension pack not installed, remote desktop not enabled.
2026-04-18 13:26:20 (1813988): Enabling shared directory for VM.
2026-04-18 13:26:20 (1813988): Starting VM using VBoxManage interface. (boinc_da231a15cc563206, slot#6)
2026-04-18 13:26:21 (1813988): Successfully started VM. (PID = '1814520')
2026-04-18 13:26:21 (1813988): Reporting VM Process ID to BOINC.
2026-04-18 13:26:21 (1813988): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-18 13:26:21 (1813988): Guest Log: CPUID EDX: 0x178bfbff
2026-04-18 13:26:21 (1813988): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-18 13:26:21 (1813988): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-18 13:26:21 (1813988): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-18 13:26:21 (1813988): Detected: Web Application Enabled (http://localhost:60939)
2026-04-18 13:26:21 (1813988): Preference change detected
2026-04-18 13:26:21 (1813988): Setting CPU throttle for VM. (90%)
2026-04-18 13:26:21 (1813988): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-18 13:26:23 (1813988): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-18 13:26:23 (1813988): Guest Log: BIOS: Booting from Hard Disk...
2026-04-18 13:26:26 (1813988): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-18 13:26:26 (1813988): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-18 13:26:26 (1813988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-18 13:26:31 (1813988): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-18 13:26:31 (1813988): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-18 13:26:37 (1813988): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000205 main     Log opened 2026-04-18T11:26:34.642143000Z
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000312 main     OS Product: Linux
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000352 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000383 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000413 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000414 main     Process ID: 1290
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.000414 main     Package type: LINUX_64BITS_GENERIC
2026-04-18 13:26:37 (1813988): Guest Log: 00:00:00.002199 main     5.2.32 r132073 started. Verbose level = 0
2026-04-18 13:26:37 (1813988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-18 13:26:37 (1813988): Guest Log: [INFO] Mounting shared directory
2026-04-18 13:26:37 (1813988): Guest Log: [INFO] Checking for init_data.xml
2026-04-18 13:26:40 (1813988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-18 13:26:40 (1813988): Guest Log: [INFO] Detected branch: prod
2026-04-18 13:26:40 (1813988): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-18 13:26:40 (1813988): Guest Log: Copying input files
2026-04-18 13:26:42 (1813988): Guest Log: Copied input files into RunAtlas.
2026-04-18 13:26:42 (1813988): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-18 13:26:42 (1813988): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-18 13:26:42 (1813988): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-18 13:26:42 (1813988): Guest Log: Further information can be found at the LHC@home message board.
2026-04-18 13:26:50 (1813988): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-18 13:26:50 (1813988): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-18 13:26:50 (1813988): Guest Log: 2.6.3.0 1566 0 32180 158583 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-18 13:26:51 (1813988): Guest Log: copied the webapp to /var/www
2026-04-18 13:26:51 (1813988): Guest Log: ATHENA_PROC_NUMBER=3
2026-04-18 13:26:51 (1813988): Guest Log: ATHENA_CORE_NUMBER=3
2026-04-18 13:26:53 (1813988): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-18 13:26:53 (1813988): Guest Log:  *** Starting ATLAS job. (PandaID=7097829186 taskID=49545114) ***
2026-04-18 13:36:03 (1813988): Guest Log:  *** Job finished ***
2026-04-18 13:36:03 (1813988): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:51,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:51,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:53,996 | INFO     | [monitor] cgroup control has ended
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:54,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019340572480)>', '<ExcThread(monitor, started 140018660132608)>']
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:54,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:54,615 | INFO     | [monitor] control thread has ended
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,083 | INFO     | all workflow threads have been joined
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,083 | INFO     | end of generic workflow (traces error code: 0)
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,083 | INFO     | traces error code: 0
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,185 [wrapper] ==== pilot stdout END ====
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,190 [wrapper] ==== wrapper stdout RESUME ====
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,195 [wrapper] pilotpid: 5958
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,200 [wrapper] Pilot exit status: 0
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,234 [wrapper] pandaids: 7097829186
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,263 [wrapper] cleanup supervisor_pilot  5964 5959
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,269 [wrapper] Test setup, not cleaning
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,274 [wrapper] apfmon messages muted
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,279 [wrapper] ==== wrapper stdout END ====
2026-04-18 13:36:03 (1813988): Guest Log: 2026-04-18 11:35:59,284 [wrapper] ==== wrapper stderr END ====
2026-04-18 13:36:03 (1813988): Guest Log:  *** Error codes and diagnostics ***
2026-04-18 13:36:03 (1813988): Guest Log:     "exeErrorCode": 65,
2026-04-18 13:36:03 (1813988): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possible memory leak: 'pss' slope: 7368.74 KB/s",
2026-04-18 13:36:03 (1813988): Guest Log:     "pilotErrorCode": 1305,
2026-04-18 13:36:03 (1813988): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possib",
2026-04-18 13:36:03 (1813988): Guest Log:  *** Listing of results directory ***
2026-04-18 13:36:03 (1813988): Guest Log: total 4224
2026-04-18 13:36:03 (1813988): Guest Log: -rwx------. 1 atlas atlas   36322 Apr 18 08:46 runpilot2-wrapper.sh
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas  644190 Apr 18 09:00 pilot3.tar.gz
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas    5094 Apr 18 09:02 queuedata.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas    6089 Apr 18 11:26 init_data.xml
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas  656942 Apr 18 11:26 input.tar.gz
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas   15665 Apr 18 11:26 start_atlas.sh
2026-04-18 13:36:03 (1813988): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 18 11:26 EVNT.49539591._000460.pool.root.1 -> /data/./ATLAS.root_0
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas    2606 Apr 18 11:26 pandaJob.out
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas  997957 Apr 18 11:27 agis_schedconf.cvmfs.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas 1512404 Apr 18 11:27 agis_ddmendpoints.agis.ALL.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas     426 Apr 18 11:27 workernode_map.json
2026-04-18 13:36:03 (1813988): Guest Log: drwx------. 5 atlas atlas    4096 Apr 18 11:27 pilot3
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas    1025 Apr 18 11:33 memory_monitor_summary.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas   73620 Apr 18 11:33 log.49545114._029430.job.log.tgz.1
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas    8258 Apr 18 11:35 heartbeat_new.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas    8220 Apr 18 11:35 heartbeat.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas      95 Apr 18 11:35 pilot_heartbeat.json
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas    4800 Apr 18 11:35 pilotlog.txt
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas   95821 Apr 18 11:35 log.49545114._029430.job.log.1
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas     188 Apr 18 11:35 output.list
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas     410 Apr 18 11:35 runtime_log
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas  184320 Apr 18 11:35 result.tar.gz
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 atlas atlas    8202 Apr 18 11:35 runtime_log.err
2026-04-18 13:36:03 (1813988): Guest Log: -rw-------. 1 atlas atlas     640 Apr 18 11:35 44e68af00eb3.diag
2026-04-18 13:36:03 (1813988): Guest Log: Looking for outputfile HITS.49545114._029430.pool.root.1
2026-04-18 13:36:03 (1813988): Guest Log: No HITS file was produced
2026-04-18 13:36:03 (1813988): Guest Log: Successfully finished the ATLAS job!
2026-04-18 13:36:03 (1813988): Guest Log: Copying the results back to the shared directory!
2026-04-18 13:36:03 (1813988): Guest Log:  *** Contents of shared directory: ***
2026-04-18 13:36:03 (1813988): Guest Log: total 274180
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 root root 279607907 Apr 18 11:26 ATLAS.root_0
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 root root      6089 Apr 18 11:26 init_data.xml
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 root root    656942 Apr 18 11:26 input.tar.gz
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 root root    184320 Apr 18  2026 result.tar.gz
2026-04-18 13:36:03 (1813988): Guest Log: -rw-r--r--. 1 root root     15665 Apr 18 11:26 start_atlas.sh
2026-04-18 13:36:03 (1813988): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-18 13:36:03 (1813988): VM Completion File Detected.
2026-04-18 13:36:03 (1813988): Powering off VM.
2026-04-18 13:36:04 (1813988): Successfully stopped VM.
2026-04-18 13:36:04 (1813988): Deregistering VM. (boinc_da231a15cc563206, slot#6)
2026-04-18 13:36:04 (1813988): Removing network bandwidth throttle group from VM.
2026-04-18 13:36:04 (1813988): Removing VM from VirtualBox.
2026-04-18 13:36:09 (1813988): called boinc_finish(0)

</stderr_txt>
]]>

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