Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:14:50 (954211): wrapper (7.7.26015): starting
07:14:50 (954211): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 07:14:50] Arguments: --nthreads 4
[2026-04-20 07:14:50] Threads: 4
[2026-04-20 07:14:50] Checking for CVMFS
[2026-04-20 07:14:50] No cvmfs_config command found, will try listing directly
[2026-04-20 07:14:50] CVMFS is ok
[2026-04-20 07:14:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 07:14:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 07:14:50] Further information can be found at the LHC@home message board.
[2026-04-20 07:14:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 07:14:50] Checking for apptainer binary...
[2026-04-20 07:14:50] which: no apptainer in ((null))
[2026-04-20 07:14:50] apptainer is not installed, using version from CVMFS
[2026-04-20 07:14:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 07:14:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-04-20 07:14:50] apptainer works
[2026-04-20 07:14:50] Set ATHENA_PROC_NUMBER=4
[2026-04-20 07:14:50] Set ATHENA_CORE_NUMBER=4
[2026-04-20 07:14:50] Starting ATLAS job with PandaID=7097812373
[2026-04-20 07:14:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 09:48:27]  *** The last 200 lines of the pilot log: ***
[2026-04-20 09:48:27] 2026-04-20 07:47:52,904 | INFO     | sum of square deviations: 1046484737.5
[2026-04-20 09:48:27] 2026-04-20 07:47:52,905 | INFO     | sum of deviations: 18126522649.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,905 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,905 | INFO     | mean y: 2320685.0933333333
[2026-04-20 09:48:27] 2026-04-20 07:47:52,905 | INFO     | intersect: 2320685.0933333333
[2026-04-20 09:48:27] 2026-04-20 07:47:52,906 | INFO     | chi2: 1.1142609447598928
[2026-04-20 09:48:27] 2026-04-20 07:47:52,906 | INFO     | sum of square deviations: 945282840.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,907 | INFO     | sum of deviations: 17363254354.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,907 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,907 | INFO     | mean y: 2319534.6896551726
[2026-04-20 09:48:27] 2026-04-20 07:47:52,907 | INFO     | intersect: 2319534.6896551726
[2026-04-20 09:48:27] 2026-04-20 07:47:52,908 | INFO     | chi2: 1.115088275752971
[2026-04-20 09:48:27] 2026-04-20 07:47:52,908 | INFO     | current chi2=1.115088275752971 (change=-0.07424930371731446 %)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,908 | INFO     | right removable region: 144
[2026-04-20 09:48:27] 2026-04-20 07:47:52,908 | INFO     | sum of square deviations: 945282840.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | sum of deviations: 2399597992.0000005
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | mean y: 2343931.8896551724
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | intersect: 2343931.8896551724
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | chi2: 0.0008506170257469633
[2026-04-20 09:48:27] 2026-04-20 07:47:52,909 | INFO     | current chi2=0.0008506170257469633 (change=99.9236608776654 %)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,910 | INFO     | sum of square deviations: 850825255.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,910 | INFO     | sum of deviations: 1719566454.0000002
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | mean y: 2345025.1714285715
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | intersect: 2345025.1714285715
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | chi2: 0.0003866891492377304
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | current chi2=0.0003866891492377304 (change=54.540158786715786 %)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,911 | INFO     | sum of square deviations: 762879420.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,912 | INFO     | sum of deviations: 1275821588.0000002
[2026-04-20 09:48:27] 2026-04-20 07:47:52,912 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,912 | INFO     | mean y: 2345793.777777778
[2026-04-20 09:48:27] 2026-04-20 07:47:52,912 | INFO     | intersect: 2345793.777777778
[2026-04-20 09:48:27] 2026-04-20 07:47:52,913 | INFO     | chi2: 0.00022057612252698557
[2026-04-20 09:48:27] 2026-04-20 07:47:52,913 | INFO     | current chi2=0.00022057612252698557 (change=42.957767767261856 %)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,913 | INFO     | sum of square deviations: 681212772.5
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | sum of deviations: 1079588309.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | mean y: 2346158.3076923075
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | intersect: 2346158.3076923075
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | chi2: 0.0002046379887026317
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | current chi2=0.0002046379887026317 (change=7.225684104771575 %)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,914 | INFO     | left removable region: 20
[2026-04-20 09:48:27] 2026-04-20 07:47:52,915 | INFO     | sum of square deviations: 591173875.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,915 | INFO     | sum of deviations: 894343997.0000001
[2026-04-20 09:48:27] 2026-04-20 07:47:52,915 | INFO     | mean x (centered): 0.0
[2026-04-20 09:48:27] 2026-04-20 07:47:52,915 | INFO     | mean y: 2345781.9838709678
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | intersect: 2345781.9838709678
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | chi2: 0.00020034512852514207
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | current memory leak: 1.51 B/s (using 124 data points, chi2=0.00)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | could have reported an average CPU frequency of 2880 MHz (9 samples)
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | ..............................
[2026-04-20 09:48:27] 2026-04-20 07:47:52,916 | INFO     | . Timing measurements:
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . get job = 0 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . initial setup = 5 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . payload setup = 10 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . stage-in = 0 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . payload execution = 9140 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . stage-out = 0 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | . log creation = 0 s
[2026-04-20 09:48:27] 2026-04-20 07:47:52,917 | INFO     | ..............................
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | 
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | job summary report
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | --------------------------------------------------
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | PanDA job id: 7097812373
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | task id: 49545114
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | errors: (none)
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 09:48:27] 2026-04-20 07:47:53,365 | INFO     | pilot state: finished 
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | transexitcode: 0
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | exeerrorcode: 0
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | exeerrordiag: 
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | exitcode: 0
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | exitmsg: OK
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | cpuconsumptiontime: 35182 s
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | nevents: 400
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | neventsw: 0
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | pid: 1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | pgrp: 1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | corecount: 4
[2026-04-20 09:48:27] 2026-04-20 07:47:53,366 | INFO     | event service: False
[2026-04-20 09:48:27] 2026-04-20 07:47:53,367 | INFO     | sizes: {0: 2281813, 1: 2283443, 11: 2283471, 9154: 2312093, 9155: 2321171, 9156: 2321373}
[2026-04-20 09:48:27] 2026-04-20 07:47:53,367 | INFO     | --------------------------------------------------
[2026-04-20 09:48:27] 2026-04-20 07:47:53,367 | INFO     | 
[2026-04-20 09:48:27] 2026-04-20 07:47:53,367 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-04-20 09:48:27] 2026-04-20 07:47:53,393 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 09:48:27] 2026-04-20 07:47:53,399 | INFO     | job 7097812373 has completed (purged errors)
[2026-04-20 09:48:27] 2026-04-20 07:47:53,399 | INFO     | overall cleanup function is called
[2026-04-20 09:48:27] 2026-04-20 07:47:54,408 | INFO     | --- collectZombieJob: --- 10, [1010556]
[2026-04-20 09:48:27] 2026-04-20 07:47:54,409 | INFO     | zombie collector waiting for pid 1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:54,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 09:48:27] 2026-04-20 07:47:54,409 | INFO     | collected zombie processes
[2026-04-20 09:48:27] 2026-04-20 07:47:54,409 | INFO     | will attempt to kill all subprocesses of pid=1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:55,111 | INFO     | process IDs to be killed: [1010556] (in reverse order)
[2026-04-20 09:48:27] 2026-04-20 07:47:55,394 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 09:48:27] 2026-04-20 07:47:55,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 09:48:27] 2026-04-20 07:47:55,424 | INFO     | did not find any defunct processes belonging to 1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:55,447 | INFO     | did not find any defunct processes belonging to 1010556
[2026-04-20 09:48:27] 2026-04-20 07:47:55,447 | INFO     | Ready for new job
[2026-04-20 09:48:27] 2026-04-20 07:47:55,449 | INFO     | **************************************
[2026-04-20 09:48:27] 2026-04-20 07:47:55,449 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 09:48:27] 2026-04-20 07:47:55,450 | INFO     | **************************************
[2026-04-20 09:48:27] 2026-04-20 07:47:55,450 | INFO     | 
[2026-04-20 09:48:27] 2026-04-20 07:47:55,457 | INFO     | architecture information:
[2026-04-20 09:48:27] 2026-04-20 07:47:55,458 | INFO     | executing command: cat /etc/os-release
[2026-04-20 09:48:27] 2026-04-20 07:47:55,481 | INFO     | cat /etc/os-release:
[2026-04-20 09:48:27] NAME="CentOS Linux"
[2026-04-20 09:48:27] VERSION="7 (Core)"
[2026-04-20 09:48:27] ID="centos"
[2026-04-20 09:48:27] ID_LIKE="rhel fedora"
[2026-04-20 09:48:27] VERSION_ID="7"
[2026-04-20 09:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 09:48:27] ANSI_COLOR="0;31"
[2026-04-20 09:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 09:48:27] HOME_URL="https://www.centos.org/"
[2026-04-20 09:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 09:48:27] 
[2026-04-20 09:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 09:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 09:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 09:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 09:48:27] 
[2026-04-20 09:48:27] 2026-04-20 07:47:55,482 | INFO     | **************************************
[2026-04-20 09:48:27] 2026-04-20 07:47:55,985 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-04-20 09:48:27] 2026-04-20 07:47:56,009 | INFO     | sufficient remaining disk space (176572858368 B)
[2026-04-20 09:48:27] 2026-04-20 07:47:56,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 09:48:27] 2026-04-20 07:47:56,010 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 09:48:27] 2026-04-20 07:47:56,010 | INFO     | update_server=False
[2026-04-20 09:48:27] 2026-04-20 07:47:56,010 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 09:48:27] 2026-04-20 07:47:56,378 | INFO     | all data control threads have been joined
[2026-04-20 09:48:27] 2026-04-20 07:47:56,580 | INFO     | all payload control threads have been joined
[2026-04-20 09:48:27] 2026-04-20 07:47:57,015 | INFO     | [job] retrieve thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,029 | WARNING  | process 1010556 can no longer be monitored (due to stat problems) - aborting
[2026-04-20 09:48:27] 2026-04-20 07:47:57,384 | INFO     | [data] control thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,399 | INFO     | [job] validate thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 09:48:27] 2026-04-20 07:47:57,427 | INFO     | all job control threads have been joined
[2026-04-20 09:48:27] 2026-04-20 07:47:57,484 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,522 | INFO     | [payload] failed_post thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,585 | INFO     | [payload] control thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,589 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-20 09:48:27] 2026-04-20 07:47:57,625 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,927 | INFO     | [data] copytool_in thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,955 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:57,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 09:48:27] 2026-04-20 07:47:58,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 09:48:27] 2026-04-20 07:47:58,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:58,323 | INFO     | number of running child processes to parent process 1010556: 1
[2026-04-20 09:48:27] 2026-04-20 07:47:58,323 | INFO     | maximum number of monitored processes: 6
[2026-04-20 09:48:27] 2026-04-20 07:47:58,323 | INFO     | aborting job monitoring since job object (job id=7097812373) has expired
[2026-04-20 09:48:27] 2026-04-20 07:47:58,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 09:48:27] 2026-04-20 07:47:58,323 | INFO     | will abort loop
[2026-04-20 09:48:27] 2026-04-20 07:47:58,428 | INFO     | [payload] validate_post thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:58,432 | INFO     | [job] control thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:59,025 | INFO     | [job] queue monitor thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:59,328 | INFO     | [job] job monitor thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:47:59,405 | INFO     | [data] copytool_out thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:48:02,005 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 09:48:27] 2026-04-20 07:48:20,392 | INFO     | [monitor] cgroup control has ended
[2026-04-20 09:48:27] 2026-04-20 07:48:22,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22976636786496)>', '<ExcThread(monitor, started 22976319694592)>']
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | INFO     | PID=968090 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | INFO     | .. there are 22 such processes running
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 09:48:27] 2026-04-20 07:48:26,870 | INFO     | [monitor] control thread has ended
[2026-04-20 09:48:27] 2026-04-20 07:48:27,064 | INFO     | all workflow threads have been joined
[2026-04-20 09:48:27] 2026-04-20 07:48:27,064 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 09:48:27] 2026-04-20 07:48:27,065 | INFO     | traces error code: 0
[2026-04-20 09:48:27] 2026-04-20 07:48:27,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 09:48:27] 2026-04-20 07:48:27,210 [wrapper] ==== pilot stdout END ====
[2026-04-20 09:48:27] 2026-04-20 07:48:27,212 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 09:48:27] 2026-04-20 07:48:27,215 [wrapper] pilotpid: 968090
[2026-04-20 09:48:27] 2026-04-20 07:48:27,218 [wrapper] Pilot exit status: 0
[2026-04-20 09:48:27] 2026-04-20 07:48:27,229 [wrapper] pandaids: 7097812373
[2026-04-20 09:48:27] 2026-04-20 07:48:27,362 [wrapper] cleanup supervisor_pilot 1318507 968091
[2026-04-20 09:48:27] 2026-04-20 07:48:27,366 [wrapper] Test setup, not cleaning
[2026-04-20 09:48:27] 2026-04-20 07:48:27,369 [wrapper] apfmon messages muted
[2026-04-20 09:48:27] 2026-04-20 07:48:27,371 [wrapper] ==== wrapper stdout END ====
[2026-04-20 09:48:27] 2026-04-20 07:48:27,375 [wrapper] ==== wrapper stderr END ====
[2026-04-20 09:48:27]  *** Error codes and diagnostics ***
[2026-04-20 09:48:27]     "exeErrorCode": 0,
[2026-04-20 09:48:27]     "pilotErrorCode": 0,
[2026-04-20 09:48:27]  *** Listing of results directory ***
[2026-04-20 09:48:27] total 458376
[2026-04-20 09:48:27] -rwx------. 1 boinc boinc     36322 Apr 18 10:46 runpilot2-wrapper.sh
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:02 queuedata.json
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc       100 Apr 20 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 09:48:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 07:14 run_atlas
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc       105 Apr 20 07:14 job.xml
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc 276706973 Apr 20 07:14 EVNT.49539591._000444.pool.root.1
[2026-04-20 09:48:27] drwxrwx--x. 2 boinc boinc      4096 Apr 20 07:14 shared
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc    656938 Apr 20 07:14 input.tar.gz
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc     15665 Apr 20 07:14 start_atlas.sh
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc         0 Apr 20 07:14 boinc_lockfile
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc      2606 Apr 20 07:14 pandaJob.out
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc    997721 Apr 20 07:15 agis_schedconf.cvmfs.json
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc   1512404 Apr 20 07:15 agis_ddmendpoints.agis.ALL.json
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc       440 Apr 20 07:15 workernode_map.json
[2026-04-20 09:48:27] drwx------. 5 boinc boinc      4096 Apr 20 07:15 pilot3
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc      6547 Apr 20 08:16 init_data.xml
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc 186309129 Apr 20 09:47 HITS.49545114._029415.pool.root.1
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc       487 Apr 20 09:47 boinc_task_state.xml
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc        95 Apr 20 09:47 pilot_heartbeat.json
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc      1027 Apr 20 09:47 memory_monitor_summary.json
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc    286304 Apr 20 09:47 log.49545114._029415.job.log.tgz.1
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc      6361 Apr 20 09:47 heartbeat_new.json
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc      6252 Apr 20 09:47 heartbeat.json
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc      8192 Apr 20 09:47 boinc_mmap_file
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc        27 Apr 20 09:47 wrapper_checkpoint.txt
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc      5363 Apr 20 09:48 pilotlog.txt
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc    866658 Apr 20 09:48 log.49545114._029415.job.log.1
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc       357 Apr 20 09:48 output.list
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc       410 Apr 20 09:48 runtime_log
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc   1167360 Apr 20 09:48 result.tar.gz
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc      8843 Apr 20 09:48 runtime_log.err
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc       662 Apr 20 09:48 44e6c666aa05.diag
[2026-04-20 09:48:27] -rw-r--r--. 1 boinc boinc     20728 Apr 20 09:48 stderr.txt
[2026-04-20 09:48:27] HITS file was successfully produced:
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc 186309129 Apr 20 09:47 shared/HITS.pool.root.1
[2026-04-20 09:48:27]  *** Contents of shared directory: ***
[2026-04-20 09:48:27] total 453976
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc 276706973 Apr 20 07:14 ATLAS.root_0
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc    656938 Apr 20 07:14 input.tar.gz
[2026-04-20 09:48:27] -rw-r--r--. 2 boinc boinc     15665 Apr 20 07:14 start_atlas.sh
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc 186309129 Apr 20 09:47 HITS.pool.root.1
[2026-04-20 09:48:27] -rw-------. 1 boinc boinc   1167360 Apr 20 09:48 result.tar.gz
09:48:28 (954211): run_atlas exited; CPU time 35799.035924
09:48:28 (954211): called boinc_finish(0)

</stderr_txt>
]]>

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