Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-18 13:00:59 (14748): vboxwrapper version 26210
2026-04-18 13:00:59 (14748): BOINC client version: 8.2.9
2026-04-18 13:01:01 (14748): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-04-18 13:01:01 (14748): Successfully copied 'init_data.xml' to the shared directory.
2026-04-18 13:01:01 (14748): Create VM. (boinc_a5dfc1651dce8880, slot#2)
2026-04-18 13:01:02 (14748): Setting Memory Size for VM. (4300MB)
2026-04-18 13:01:02 (14748): Setting CPU Count for VM. (3)
2026-04-18 13:01:02 (14748): Setting Chipset Options for VM.
2026-04-18 13:01:03 (14748): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-18 13:01:03 (14748): Setting Boot Options for VM.
2026-04-18 13:01:03 (14748): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-18 13:01:04 (14748): Enabling VM Network Access.
2026-04-18 13:01:04 (14748): Disabling USB Support for VM.
2026-04-18 13:01:04 (14748): Disabling COM Port Support for VM.
2026-04-18 13:01:04 (14748): Disabling LPT Port Support for VM.
2026-04-18 13:01:05 (14748): Disabling Audio Support for VM.
2026-04-18 13:01:05 (14748): Disabling Clipboard Support for VM.
2026-04-18 13:01:05 (14748): Disabling Drag and Drop Support for VM.
2026-04-18 13:01:05 (14748): Adding storage controller(s) to VM.
2026-04-18 13:01:06 (14748): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-18 13:01:08 (14748): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-18 13:01:08 (14748): forwarding host port 55589 to guest port 80
2026-04-18 13:01:08 (14748): Enabling remote desktop for VM.
2026-04-18 13:01:09 (14748): Required extension pack not installed, remote desktop not enabled.
2026-04-18 13:01:09 (14748): Enabling shared directory for VM.
2026-04-18 13:01:09 (14748): Starting VM using VBoxManage interface. (boinc_a5dfc1651dce8880, slot#2)
2026-04-18 13:01:15 (14748): Successfully started VM. (PID = '6552')
2026-04-18 13:01:15 (14748): Reporting VM Process ID to BOINC.
2026-04-18 13:01:15 (14748): Guest Log: BIOS: VirtualBox 7.1.12
2026-04-18 13:01:15 (14748): Guest Log: CPUID EDX: 0x178bfbff
2026-04-18 13:01:15 (14748): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-18 13:01:15 (14748): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-18 13:01:15 (14748): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-18 13:01:15 (14748): Detected: Web Application Enabled (http://localhost:55589)
2026-04-18 13:01:15 (14748): Preference change detected
2026-04-18 13:01:15 (14748): Setting CPU throttle for VM. (90%)
2026-04-18 13:01:15 (14748): Setting network throttle for VM. (500KB)
2026-04-18 13:01:16 (14748): Setting checkpoint interval to 3000 seconds. (Higher value of (Preference: 3000 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-18 13:01:17 (14748): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-18 13:01:17 (14748): Guest Log: BIOS: Booting from Hard Disk...
2026-04-18 13:01:20 (14748): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-18 13:01:20 (14748): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-18 13:01:20 (14748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-18 13:01:25 (14748): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-18 13:01:25 (14748): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-18 13:01:32 (14748): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000159 main     Log opened 2026-04-18T13:01:30.540979000Z
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000285 main     OS Product: Linux
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000323 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000353 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000383 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000384 main     Process ID: 1284
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.000385 main     Package type: LINUX_64BITS_GENERIC
2026-04-18 13:01:32 (14748): Guest Log: 00:00:00.001771 main     5.2.32 r132073 started. Verbose level = 0
2026-04-18 13:01:32 (14748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-18 13:01:32 (14748): Guest Log: [INFO] Mounting shared directory
2026-04-18 13:01:33 (14748): Guest Log: [INFO] Checking for init_data.xml
2026-04-18 13:01:36 (14748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-18 13:01:36 (14748): Guest Log: [INFO] Detected branch: prod
2026-04-18 13:01:36 (14748): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-18 13:01:36 (14748): Guest Log: Copying input files
2026-04-18 13:01:38 (14748): Guest Log: Copied input files into RunAtlas.
2026-04-18 13:01:38 (14748): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-18 13:01:38 (14748): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-18 13:01:38 (14748): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-18 13:01:38 (14748): Guest Log: Further information can be found at the LHC@home message board.
2026-04-18 13:01:42 (14748): Guest Log: 00:00:10.013401 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 891 434 000ns (GuestNow=1 776 510 102 652 877 000 ns GuestLast=1 776 517 290 544 311 000 ns fSetTimeLastLoop=true )
2026-04-18 13:01:46 (14748): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-18 13:01:47 (14748): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-18 13:01:47 (14748): Guest Log: 2.6.3.0 1558 0 30132 158581 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-18 13:01:49 (14748): Guest Log: copied the webapp to /var/www
2026-04-18 13:01:49 (14748): Guest Log: ATHENA_PROC_NUMBER=3
2026-04-18 13:01:49 (14748): Guest Log: ATHENA_CORE_NUMBER=3
2026-04-18 13:01:49 (14748): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-18 13:01:49 (14748): Guest Log:  *** Starting ATLAS job. (PandaID=7097724545 taskID=49545114) ***
2026-04-18 14:50:21 (14748): Status Report: Elapsed Time: '6000.003656'
2026-04-18 14:50:21 (14748): Status Report: CPU Time: '14784.343750'
2026-04-18 16:40:25 (14748): Status Report: Elapsed Time: '12000.910469'
2026-04-18 16:40:25 (14748): Status Report: CPU Time: '31294.156250'
2026-04-18 18:28:36 (14748): Status Report: Elapsed Time: '18001.754066'
2026-04-18 18:28:36 (14748): Status Report: CPU Time: '46069.609375'
2026-04-18 18:50:29 (14748): Guest Log:  *** Job finished ***
2026-04-18 18:50:29 (14748): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:13,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:13,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:15,119 | INFO     | [monitor] cgroup control has ended
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:15,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367283599168)>', '<ExcThread(monitor, started 140366703486720)>']
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:16,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:16,532 | INFO     | [monitor] control thread has ended
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,710 | INFO     | all workflow threads have been joined
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,710 | INFO     | end of generic workflow (traces error code: 0)
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,710 | INFO     | traces error code: 0
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,824 [wrapper] ==== pilot stdout END ====
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,832 [wrapper] ==== wrapper stdout RESUME ====
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,838 [wrapper] pilotpid: 5949
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:20,849 [wrapper] Pilot exit status: 0
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,102 [wrapper] pandaids: 7097724545
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,145 [wrapper] cleanup supervisor_pilot 29990 5950
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,150 [wrapper] Test setup, not cleaning
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,156 [wrapper] apfmon messages muted
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,164 [wrapper] ==== wrapper stdout END ====
2026-04-18 18:50:29 (14748): Guest Log: 2026-04-18 16:50:21,169 [wrapper] ==== wrapper stderr END ====
2026-04-18 18:50:29 (14748): Guest Log:  *** Error codes and diagnostics ***
2026-04-18 18:50:29 (14748): Guest Log:     "exeErrorCode": 0,
2026-04-18 18:50:29 (14748): Guest Log:     "pilotErrorCode": 0,
2026-04-18 18:50:29 (14748): Guest Log:  *** Listing of results directory ***
2026-04-18 18:50:29 (14748): Guest Log: total 190592
2026-04-18 18:50:29 (14748): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 18 08:25 runpilot2-wrapper.sh
2026-04-18 18:50:29 (14748): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 18 08:36 pilot3.tar.gz
2026-04-18 18:50:29 (14748): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 18 08:42 queuedata.json
2026-04-18 18:50:29 (14748): Guest Log: -rwxr-xr-x. 1 atlas atlas      8676 Apr 18 11:01 init_data.xml
2026-04-18 18:50:29 (14748): Guest Log: -rwxr-xr-x. 1 atlas atlas    656942 Apr 18 11:01 input.tar.gz
2026-04-18 18:50:29 (14748): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 18 11:01 start_atlas.sh
2026-04-18 18:50:29 (14748): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 11:01 EVNT.49539591._000358.pool.root.1 -> /data/./ATLAS.root_0
2026-04-18 18:50:29 (14748): Guest Log: -rw-r--r--. 1 atlas atlas      2603 Apr 18 11:01 pandaJob.out
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas    997957 Apr 18 11:02 agis_schedconf.cvmfs.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas       410 Apr 18 11:02 workernode_map.json
2026-04-18 18:50:29 (14748): Guest Log: drwx------. 5 atlas atlas      4096 Apr 18 11:02 pilot3
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas 186701536 Apr 18 16:49 HITS.49545114._028529.pool.root.1
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 18 16:49 memory_monitor_summary.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas   1512404 Apr 18 16:49 agis_ddmendpoints.agis.ALL.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas    383126 Apr 18 16:49 log.49545114._028529.job.log.tgz.1
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas      6350 Apr 18 16:49 heartbeat_new.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas      6241 Apr 18 16:49 heartbeat.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 16:50 pilot_heartbeat.json
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas      4800 Apr 18 16:50 pilotlog.txt
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas   1853310 Apr 18 16:50 log.49545114._028529.job.log.1
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 16:50 output.list
2026-04-18 18:50:29 (14748): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 18 16:50 runtime_log
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas   2252800 Apr 18 16:50 result.tar.gz
2026-04-18 18:50:29 (14748): Guest Log: -rw-r--r--. 1 atlas atlas      8385 Apr 18 16:50 runtime_log.err
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas       665 Apr 18 16:50 401427bf069b.diag
2026-04-18 18:50:29 (14748): Guest Log: Looking for outputfile HITS.49545114._028529.pool.root.1
2026-04-18 18:50:29 (14748): Guest Log: HITS file was successfully produced
2026-04-18 18:50:29 (14748): Guest Log: -rw-------. 1 atlas atlas 186701536 Apr 18 16:49 /home/atlas/RunAtlas/HITS.49545114._028529.pool.root.1
2026-04-18 18:50:30 (14748): Guest Log: Successfully finished the ATLAS job!
2026-04-18 18:50:30 (14748): Guest Log: Copying the results back to the shared directory!
2026-04-18 18:50:30 (14748): Guest Log:  *** Contents of shared directory: ***
2026-04-18 18:50:30 (14748): Guest Log: total 459240
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root 280614272 Apr 18 11:00 ATLAS.root_0
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root 186701536 Apr 18 16:50 HITS.pool.root.1
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root      8676 Apr 18 11:00 init_data.xml
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root    656942 Apr 18 10:29 input.tar.gz
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root   2252800 Apr 18 16:50 result.tar.gz
2026-04-18 18:50:30 (14748): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 10:29 start_atlas.sh
2026-04-18 18:50:30 (14748): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-18 18:50:30 (14748): VM Completion File Detected.
2026-04-18 18:50:30 (14748): Powering off VM.
2026-04-18 18:50:31 (14748): Successfully stopped VM.
2026-04-18 18:50:31 (14748): Deregistering VM. (boinc_a5dfc1651dce8880, slot#2)
2026-04-18 18:50:31 (14748): Removing network bandwidth throttle group from VM.
2026-04-18 18:50:31 (14748): Removing VM from VirtualBox.
2026-04-18 18:50:36 (14748): called boinc_finish(0)

</stderr_txt>
]]>

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