Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:11:12 (2736632): wrapper (7.7.26015): starting
06:11:12 (2736632): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 06:11:12] Arguments: --nthreads 8
[2026-04-18 06:11:12] Threads: 8
[2026-04-18 06:11:12] Checking for CVMFS
[2026-04-18 06:11:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 06:11:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 06:11:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 06:11:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 06:11:15] 2.13.3.0 2171544 104493 424692 158580 2 167 28311826 32935936 36953 16776704 0 388732522 99.639 450739782 29607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-18 06:11:15] CVMFS is ok
[2026-04-18 06:11:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 06:11:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 06:11:15] Further information can be found at the LHC@home message board.
[2026-04-18 06:11:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 06:11:15] Checking for apptainer binary...
[2026-04-18 06:11:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 06:11:15] Running /usr/bin/apptainer --version
[2026-04-18 06:11:15] apptainer version 1.4.5-2.el9
[2026-04-18 06:11:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 06:11:16] c6-12-27-4.aglt2.org
[2026-04-18 06:11:16] apptainer works
[2026-04-18 06:11:16] Set ATHENA_PROC_NUMBER=8
[2026-04-18 06:11:16] Set ATHENA_CORE_NUMBER=8
[2026-04-18 06:11:16] Starting ATLAS job with PandaID=7097681773
[2026-04-18 06:11:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 11:44:57]  *** The last 200 lines of the pilot log: ***
[2026-04-18 11:44:57] 2026-04-18 15:43:48,044 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,045 | INFO     | log transfer has been attempted: DONE
[2026-04-18 11:44:57] 2026-04-18 15:43:48,045 | INFO     | job 7097681773 has finished - writing final server update
[2026-04-18 11:44:57] 2026-04-18 15:43:48,045 | INFO     | total number of processed events: 400 (read)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,223 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7097681773/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,223 | INFO     | extracted standard info from prmon json
[2026-04-18 11:44:57] 2026-04-18 15:43:48,224 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 11:44:57] 2026-04-18 15:43:48,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 11:44:57] 2026-04-18 15:43:48,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 11:44:57] 2026-04-18 15:43:48,290 | INFO     | fitting pss+swap vs Time
[2026-04-18 11:44:57] 2026-04-18 15:43:48,291 | INFO     | sum of square deviations: 10449331602.854391
[2026-04-18 11:44:57] 2026-04-18 15:43:48,301 | INFO     | sum of deviations: 33771760406.11459
[2026-04-18 11:44:57] 2026-04-18 15:43:48,302 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,302 | INFO     | mean y: 2503770.0185758513
[2026-04-18 11:44:57] 2026-04-18 15:43:48,302 | INFO     | intersect: 2503770.0185758513
[2026-04-18 11:44:57] 2026-04-18 15:43:48,302 | INFO     | chi2: 5.1283536912593695
[2026-04-18 11:44:57] 2026-04-18 15:43:48,349 | INFO     | sum of square deviations: 9971606531.638384
[2026-04-18 11:44:57] 2026-04-18 15:43:48,352 | INFO     | sum of deviations: 75399393524.93713
[2026-04-18 11:44:57] 2026-04-18 15:43:48,352 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,353 | INFO     | mean y: 2516932.534591195
[2026-04-18 11:44:57] 2026-04-18 15:43:48,353 | INFO     | intersect: 2516932.534591195
[2026-04-18 11:44:57] 2026-04-18 15:43:48,397 | INFO     | chi2: 3.6840038535650863
[2026-04-18 11:44:57] 2026-04-18 15:43:48,398 | INFO     | current chi2=3.6840038535650863 (change=28.16400592954411 %)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,398 | INFO     | sum of square deviations: 9508594833.98086
[2026-04-18 11:44:57] 2026-04-18 15:43:48,401 | INFO     | sum of deviations: 74195111943.41214
[2026-04-18 11:44:57] 2026-04-18 15:43:48,421 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,421 | INFO     | mean y: 2516535.8466453673
[2026-04-18 11:44:57] 2026-04-18 15:43:48,421 | INFO     | intersect: 2516535.8466453673
[2026-04-18 11:44:57] 2026-04-18 15:43:48,422 | INFO     | chi2: 3.686351046289882
[2026-04-18 11:44:57] 2026-04-18 15:43:48,422 | INFO     | current chi2=3.686351046289882 (change=-0.06371309092209901 %)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,422 | INFO     | right removable region: 312
[2026-04-18 11:44:57] 2026-04-18 15:43:48,423 | INFO     | sum of square deviations: 9971465681.98735
[2026-04-18 11:44:57] 2026-04-18 15:43:48,540 | INFO     | sum of deviations: -59765169816.18862
[2026-04-18 11:44:57] 2026-04-18 15:43:48,540 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,541 | INFO     | mean y: 2533573.9056603773
[2026-04-18 11:44:57] 2026-04-18 15:43:48,541 | INFO     | intersect: 2533573.9056603773
[2026-04-18 11:44:57] 2026-04-18 15:43:48,541 | INFO     | chi2: 2.0120698006910462
[2026-04-18 11:44:57] 2026-04-18 15:43:48,542 | INFO     | current chi2=2.0120698006910462 (change=60.76577549398816 %)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,554 | INFO     | sum of square deviations: 9508409890.690079
[2026-04-18 11:44:57] 2026-04-18 15:43:48,557 | INFO     | sum of deviations: -85602419653.2396
[2026-04-18 11:44:57] 2026-04-18 15:43:48,557 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,557 | INFO     | mean y: 2542052.3482428114
[2026-04-18 11:44:57] 2026-04-18 15:43:48,557 | INFO     | intersect: 2542052.3482428114
[2026-04-18 11:44:57] 2026-04-18 15:43:48,578 | INFO     | chi2: 1.6975523815799105
[2026-04-18 11:44:57] 2026-04-18 15:43:48,578 | INFO     | current chi2=1.6975523815799105 (change=15.631536192388285 %)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,578 | INFO     | left removable region: 10
[2026-04-18 11:44:57] 2026-04-18 15:43:48,579 | INFO     | sum of square deviations: 8540783498.185439
[2026-04-18 11:44:57] 2026-04-18 15:43:48,581 | INFO     | sum of deviations: -42607167426.72851
[2026-04-18 11:44:57] 2026-04-18 15:43:48,581 | INFO     | mean x (centered): 0.0
[2026-04-18 11:44:57] 2026-04-18 15:43:48,582 | INFO     | mean y: 2556551.718543046
[2026-04-18 11:44:57] 2026-04-18 15:43:48,582 | INFO     | intersect: 2556551.718543046
[2026-04-18 11:44:57] 2026-04-18 15:43:48,601 | INFO     | chi2: 0.19269183030323414
[2026-04-18 11:44:57] 2026-04-18 15:43:48,602 | INFO     | current memory leak: -4.99 B/s (using 302 data points, chi2=0.19)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | could have reported an average CPU frequency of 2561 MHz (14 samples)
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | ..............................
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . Timing measurements:
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . get job = 0 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . initial setup = 41 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . payload setup = 77 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . stage-in = 0 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . payload execution = 19722 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . stage-out = 9 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | . log creation = 1 s
[2026-04-18 11:44:57] 2026-04-18 15:43:48,603 | INFO     | ..............................
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | job summary report
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | --------------------------------------------------
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | PanDA job id: 7097681773
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | task id: 49545114
[2026-04-18 11:44:57] 2026-04-18 15:43:49,607 | INFO     | errors: (none)
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | pilot state: finished 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | transexitcode: 0
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | exeerrorcode: 0
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | exeerrordiag: 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | exitcode: 0
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | exitmsg: OK
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | cpuconsumptiontime: 45034 s
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | nevents: 400
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | neventsw: 0
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | pid: 2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | pgrp: 2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:49,608 | INFO     | corecount: 8
[2026-04-18 11:44:57] 2026-04-18 15:43:49,609 | INFO     | event service: False
[2026-04-18 11:44:57] 2026-04-18 15:43:49,609 | INFO     | sizes: {0: 2281573, 1: 2281657, 2: 2273193, 3: 2283486, 14: 2283514, 19805: 2316503, 19806: 2316630, 19817: 2325684, 19820: 2325740, 19823: 2325934}
[2026-04-18 11:44:57] 2026-04-18 15:43:49,609 | INFO     | --------------------------------------------------
[2026-04-18 11:44:57] 2026-04-18 15:43:49,609 | INFO     | 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 11:44:57] 2026-04-18 15:43:49,747 | INFO     | job 7097681773 has completed (purged errors)
[2026-04-18 11:44:57] 2026-04-18 15:43:49,747 | INFO     | overall cleanup function is called
[2026-04-18 11:44:57] 2026-04-18 15:43:49,935 | INFO     | PID=2742235 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-18 11:44:57] 2026-04-18 15:43:49,939 | INFO     | .. there are 38 such processes running
[2026-04-18 11:44:57] 2026-04-18 15:43:50,798 | INFO     | --- collectZombieJob: --- 10, [2750228]
[2026-04-18 11:44:57] 2026-04-18 15:43:50,798 | INFO     | zombie collector waiting for pid 2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:50,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 11:44:57] 2026-04-18 15:43:50,798 | INFO     | collected zombie processes
[2026-04-18 11:44:57] 2026-04-18 15:43:50,799 | INFO     | will attempt to kill all subprocesses of pid=2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:51,988 | INFO     | process IDs to be killed: [2750228] (in reverse order)
[2026-04-18 11:44:57] 2026-04-18 15:43:52,459 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 11:44:57] 2026-04-18 15:43:52,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 11:44:57] 2026-04-18 15:43:52,510 | INFO     | did not find any defunct processes belonging to 2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:52,601 | INFO     | did not find any defunct processes belonging to 2750228
[2026-04-18 11:44:57] 2026-04-18 15:43:52,602 | INFO     | Ready for new job
[2026-04-18 11:44:57] 2026-04-18 15:43:52,614 | INFO     | **************************************
[2026-04-18 11:44:57] 2026-04-18 15:43:52,614 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 11:44:57] 2026-04-18 15:43:52,614 | INFO     | **************************************
[2026-04-18 11:44:57] 2026-04-18 15:43:52,615 | INFO     | 
[2026-04-18 11:44:57] 2026-04-18 15:43:52,640 | INFO     | architecture information:
[2026-04-18 11:44:57] 2026-04-18 15:43:52,655 | INFO     | executing command: cat /etc/os-release
[2026-04-18 11:44:57] 2026-04-18 15:43:52,796 | INFO     | cat /etc/os-release:
[2026-04-18 11:44:57] NAME="CentOS Linux"
[2026-04-18 11:44:57] VERSION="7 (Core)"
[2026-04-18 11:44:57] ID="centos"
[2026-04-18 11:44:57] ID_LIKE="rhel fedora"
[2026-04-18 11:44:57] VERSION_ID="7"
[2026-04-18 11:44:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 11:44:57] ANSI_COLOR="0;31"
[2026-04-18 11:44:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 11:44:57] HOME_URL="https://www.centos.org/"
[2026-04-18 11:44:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 11:44:57] 
[2026-04-18 11:44:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 11:44:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 11:44:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 11:44:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 11:44:57] 
[2026-04-18 11:44:57] 2026-04-18 15:43:52,812 | INFO     | **************************************
[2026-04-18 11:44:57] 2026-04-18 15:43:53,322 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-18 11:44:57] 2026-04-18 15:43:53,468 | INFO     | sufficient remaining disk space (93334798336 B)
[2026-04-18 11:44:57] 2026-04-18 15:43:53,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 11:44:57] 2026-04-18 15:43:53,469 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 11:44:57] 2026-04-18 15:43:53,469 | INFO     | update_server=False
[2026-04-18 11:44:57] 2026-04-18 15:43:53,469 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 11:44:57] 2026-04-18 15:43:53,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 11:44:57] 2026-04-18 15:43:53,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 11:44:57] 2026-04-18 15:43:53,607 | INFO     | all data control threads have been joined
[2026-04-18 11:44:57] 2026-04-18 15:43:53,891 | INFO     | all payload control threads have been joined
[2026-04-18 11:44:57] 2026-04-18 15:43:53,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 11:44:57] 2026-04-18 15:43:53,923 | INFO     | aborting loop
[2026-04-18 11:44:57] 2026-04-18 15:43:54,480 | INFO     | [job] retrieve thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,496 | INFO     | all job control threads have been joined
[2026-04-18 11:44:57] 2026-04-18 15:43:54,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,510 | INFO     | [job] validate thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,511 | INFO     | [data] copytool_in thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,613 | INFO     | [data] control thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 11:44:57] 2026-04-18 15:43:54,638 | INFO     | [payload] validate_post thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,897 | INFO     | [payload] control thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,929 | INFO     | [job] job monitor thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:54,994 | INFO     | [payload] failed_post thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,319 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,477 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,489 | INFO     | [data] copytool_out thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,502 | INFO     | [job] control thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,626 | INFO     | [job] queue monitor thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:55,876 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:43:57,528 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 11:44:57] 2026-04-18 15:44:27,673 | INFO     | PID=2742235 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 11:44:57] 2026-04-18 15:44:27,674 | INFO     | .. there are 38 such processes running
[2026-04-18 11:44:57] 2026-04-18 15:44:27,675 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 11:44:57] 2026-04-18 15:44:27,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 11:44:57] 2026-04-18 15:44:27,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 11:44:57] 2026-04-18 15:44:47,828 | INFO     | [monitor] cgroup control has ended
[2026-04-18 11:44:57] 2026-04-18 15:44:49,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078515246912)>', '<ExcThread(monitor, started 140077942437632)>']
[2026-04-18 11:44:57] 2026-04-18 15:44:49,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 11:44:57] 2026-04-18 15:44:49,825 | INFO     | [monitor] control thread has ended
[2026-04-18 11:44:57] 2026-04-18 15:44:54,785 | INFO     | all workflow threads have been joined
[2026-04-18 11:44:57] 2026-04-18 15:44:54,785 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 11:44:57] 2026-04-18 15:44:54,786 | INFO     | traces error code: 0
[2026-04-18 11:44:57] 2026-04-18 15:44:54,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 11:44:57] 2026-04-18 15:44:56,323 [wrapper] ==== pilot stdout END ====
[2026-04-18 11:44:57] 2026-04-18 15:44:56,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 11:44:57] 2026-04-18 15:44:56,378 [wrapper] pilotpid: 2742235
[2026-04-18 11:44:57] 2026-04-18 15:44:56,410 [wrapper] Pilot exit status: 0
[2026-04-18 11:44:57] 2026-04-18 15:44:56,537 [wrapper] pandaids: 7097681773
[2026-04-18 11:44:57] 2026-04-18 15:44:56,921 [wrapper] cleanup supervisor_pilot 3876642 2742236
[2026-04-18 11:44:57] 2026-04-18 15:44:56,942 [wrapper] Test setup, not cleaning
[2026-04-18 11:44:57] 2026-04-18 15:44:56,984 [wrapper] apfmon messages muted
[2026-04-18 11:44:57] 2026-04-18 15:44:57,021 [wrapper] ==== wrapper stdout END ====
[2026-04-18 11:44:57] 2026-04-18 15:44:57,033 [wrapper] ==== wrapper stderr END ====
[2026-04-18 11:44:57]  *** Error codes and diagnostics ***
[2026-04-18 11:44:57]     "exeErrorCode": 0,
[2026-04-18 11:44:57]     "pilotErrorCode": 0,
[2026-04-18 11:44:57]  *** Listing of results directory ***
[2026-04-18 11:44:57] total 460380
[2026-04-18 11:44:57] -rwx------. 1 boincer umatlas     36322 Apr 18 04:18 runpilot2-wrapper.sh
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas    644190 Apr 18 04:36 pilot3.tar.gz
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas      5094 Apr 18 04:42 queuedata.json
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas       100 Apr 18 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 11:44:57] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 06:11 run_atlas
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas       105 Apr 18 06:11 job.xml
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas 279903649 Apr 18 06:11 EVNT.49539591._000425.pool.root.1
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas    656943 Apr 18 06:11 input.tar.gz
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 06:11 start_atlas.sh
[2026-04-18 11:44:57] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 06:11 shared
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas         0 Apr 18 06:11 boinc_lockfile
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas      2605 Apr 18 06:11 pandaJob.out
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas        57 Apr 18 06:11 setup.sh.local
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas    997949 Apr 18 06:12 agis_schedconf.cvmfs.json
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas       443 Apr 18 06:13 workernode_map.json
[2026-04-18 11:44:57] drwx------. 5 boincer umatlas      4096 Apr 18 06:13 pilot3
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas      6795 Apr 18 11:39 init_data.xml
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas 183614867 Apr 18 11:41 HITS.49545114._027979.pool.root.1
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas       488 Apr 18 11:41 boinc_task_state.xml
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas      1042 Apr 18 11:43 memory_monitor_summary.json
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas   1512404 Apr 18 11:43 agis_ddmendpoints.agis.ALL.json
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas        95 Apr 18 11:43 pilot_heartbeat.json
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas    415927 Apr 18 11:43 log.49545114._027979.job.log.tgz.1
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas      6418 Apr 18 11:43 heartbeat_new.json
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas      6309 Apr 18 11:43 heartbeat.json
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas        28 Apr 18 11:44 wrapper_checkpoint.txt
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas      4819 Apr 18 11:44 pilotlog.txt
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas   1508116 Apr 18 11:44 log.49545114._027979.job.log.1
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas       357 Apr 18 11:44 output.list
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas       410 Apr 18 11:44 runtime_log
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas   1945600 Apr 18 11:44 result.tar.gz
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas      8974 Apr 18 11:44 runtime_log.err
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas       658 Apr 18 11:44 3e712f1f83a4.diag
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 11:44 boinc_mmap_file
[2026-04-18 11:44:57] -rw-r--r--. 1 boincer umatlas     21174 Apr 18 11:44 stderr.txt
[2026-04-18 11:44:57] HITS file was successfully produced:
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas 183614867 Apr 18 11:41 shared/HITS.pool.root.1
[2026-04-18 11:44:57]  *** Contents of shared directory: ***
[2026-04-18 11:44:57] total 455220
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas 279903649 Apr 18 06:11 ATLAS.root_0
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas    656943 Apr 18 06:11 input.tar.gz
[2026-04-18 11:44:57] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 06:11 start_atlas.sh
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas 183614867 Apr 18 11:41 HITS.pool.root.1
[2026-04-18 11:44:57] -rw-------. 1 boincer umatlas   1945600 Apr 18 11:44 result.tar.gz
11:45:19 (2736632): run_atlas exited; CPU time 46101.935729
11:45:19 (2736632): called boinc_finish(0)

</stderr_txt>
]]>

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