Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:17 (4080411): wrapper (7.7.26015): starting
12:53:17 (4080411): wrapper: running run_atlas (--nthreads 12)
[2026-04-18 12:53:17] Arguments: --nthreads 12
[2026-04-18 12:53:17] Threads: 12
[2026-04-18 12:53:17] Checking for CVMFS
[2026-04-18 12:53:17] No cvmfs_config command found, will try listing directly
[2026-04-18 12:53:17] CVMFS is ok
[2026-04-18 12:53:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 12:53:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 12:53:17] Further information can be found at the LHC@home message board.
[2026-04-18 12:53:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 12:53:17] Checking for apptainer binary...
[2026-04-18 12:53:17] which: no apptainer in ((null))
[2026-04-18 12:53:17] apptainer is not installed, using version from CVMFS
[2026-04-18 12:53:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 12:53:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/17/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-18 12:53:17] apptainer works
[2026-04-18 12:53:17] Set ATHENA_PROC_NUMBER=12
[2026-04-18 12:53:17] Set ATHENA_CORE_NUMBER=12
[2026-04-18 12:53:17] Starting ATLAS job with PandaID=7097577793
[2026-04-18 12:53:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 13:22:36]  *** The last 200 lines of the pilot log: ***
[2026-04-18 13:22:36]  filesize=335640
[2026-04-18 13:22:36]  filetype=log
[2026-04-18 13:22:36]  guid=8c8f64d9-04e3-485c-b6c7-b9bba0a7ce96
[2026-04-18 13:22:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-18 13:22:36]  is_altstaged=None
[2026-04-18 13:22:36]  is_tar=False
[2026-04-18 13:22:36]  lfn=log.49545114._027463.job.log.tgz.1
[2026-04-18 13:22:36]  mtime=0
[2026-04-18 13:22:36]  protocol_id=None
[2026-04-18 13:22:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-18 13:22:36]  replicas=None
[2026-04-18 13:22:36]  scope=mc23_13p6TeV
[2026-04-18 13:22:36]  status=None
[2026-04-18 13:22:36]  status_code=0
[2026-04-18 13:22:36]  storage_token=
[2026-04-18 13:22:36]  surl=/var/lib/boinc/var/slot60/slots/17/PanDA_Pilot-7097577793/log.49545114._027463.job.log.tgz.1
[2026-04-18 13:22:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/26/log.49545114._027463.job.log.tgz.1
[2026-04-18 13:22:36]  workdir=None
[2026-04-18 13:22:36] ]
[2026-04-18 13:22:36] 2026-04-18 11:21:44,594 | INFO     | transferring file log.49545114._027463.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/17/PanDA_Pilot-7097577793/log.49545114._027463.job.log.tgz.1 to /var/lib/
[2026-04-18 13:22:36] 2026-04-18 11:21:44,594 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/17/PanDA_Pilot-7097577793/log.49545114._027463.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/17/
[2026-04-18 13:22:36] 2026-04-18 11:21:44,610 | INFO     | adding to output.list: log.49545114._027463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/26/log.49545114._027463.job.log.tg
[2026-04-18 13:22:36] 2026-04-18 11:21:44,611 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-18 13:22:36] 2026-04-18 11:21:44,611 | INFO     | summary of transferred files:
[2026-04-18 13:22:36] 2026-04-18 11:21:44,611 | INFO     |  -- lfn=log.49545114._027463.job.log.tgz.1, status_code=0, status=transferred
[2026-04-18 13:22:36] 2026-04-18 11:21:44,611 | INFO     | stage-out finished correctly
[2026-04-18 13:22:36] 2026-04-18 11:21:44,640 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-18 13:22:36] 2026-04-18 11:21:45,311 | INFO     | job 7097577793 has state=finished
[2026-04-18 13:22:36] 2026-04-18 11:21:45,312 | INFO     | preparing for final server update for job 7097577793 in state='finished'
[2026-04-18 13:22:36] 2026-04-18 11:21:45,312 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/17/PanDA_Pilot-7097577793/jobReport.json
[2026-04-18 13:22:36] 2026-04-18 11:21:45,313 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/17/workernode_map.json
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | INFO     | this job has now completed (state=finished)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | INFO     | log transfer has been attempted: DONE
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | INFO     | job 7097577793 has finished - writing final server update
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1984442/.job.ad'
[2026-04-18 13:22:36] 2026-04-18 11:21:45,314 | INFO     | total number of processed events: 400 (read)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,331 | INFO     | using path: /var/lib/boinc/var/slot60/slots/17/PanDA_Pilot-7097577793/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,331 | INFO     | extracted standard info from prmon json
[2026-04-18 13:22:36] 2026-04-18 11:21:45,332 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 13:22:36] 2026-04-18 11:21:45,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 13:22:36] 2026-04-18 11:21:45,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 13:22:36] 2026-04-18 11:21:45,332 | INFO     | fitting pss+swap vs Time
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | sum of square deviations: 2865170.0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | sum of deviations: -23318042.999999993
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | mean x (centered): 0.0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | mean y: 2720579.9523809524
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | intersect: 2720579.9523809524
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | chi2: 0.00017455566206404303
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | current memory leak: -8.14 B/s (using 21 data points, chi2=0.00)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | could have reported an average CPU frequency of 3625 MHz (4 samples)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | ..............................
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . Timing measurements:
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . get job = 0 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . initial setup = 4 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . payload setup = 6 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . stage-in = 0 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . payload execution = 1673 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . stage-out = 0 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,333 | INFO     | . log creation = 0 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,334 | INFO     | ..............................
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | 
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | job summary report
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | --------------------------------------------------
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | PanDA job id: 7097577793
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | task id: 49545114
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | errors: (none)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | pilot state: finished 
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | transexitcode: 0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | exeerrorcode: 0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | exeerrordiag: 
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | exitcode: 0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | exitmsg: OK
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | cpuconsumptiontime: 17559 s
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | nevents: 400
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | neventsw: 0
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | pid: 4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | pgrp: 4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:45,381 | INFO     | corecount: 12
[2026-04-18 13:22:36] 2026-04-18 11:21:45,382 | INFO     | event service: False
[2026-04-18 13:22:36] 2026-04-18 11:21:45,382 | INFO     | sizes: {0: 2281585, 1: 2283470, 11: 2283470, 1683: 2308316, 1685: 2317394, 1686: 2317532}
[2026-04-18 13:22:36] 2026-04-18 11:21:45,382 | INFO     | --------------------------------------------------
[2026-04-18 13:22:36] 2026-04-18 11:21:45,382 | INFO     | 
[2026-04-18 13:22:36] 2026-04-18 11:21:45,382 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/17
[2026-04-18 13:22:36] 2026-04-18 11:21:45,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | job 7097577793 has completed (purged errors)
[2026-04-18 13:22:36] 2026-04-18 11:21:45,403 | INFO     | overall cleanup function is called
[2026-04-18 13:22:36] 2026-04-18 11:21:46,410 | INFO     | --- collectZombieJob: --- 10, [4099218]
[2026-04-18 13:22:36] 2026-04-18 11:21:46,411 | INFO     | zombie collector waiting for pid 4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:46,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 13:22:36] 2026-04-18 11:21:46,411 | INFO     | collected zombie processes
[2026-04-18 13:22:36] 2026-04-18 11:21:46,411 | INFO     | will attempt to kill all subprocesses of pid=4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:46,747 | INFO     | process IDs to be killed: [4099218] (in reverse order)
[2026-04-18 13:22:36] 2026-04-18 11:21:46,890 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 13:22:36] 2026-04-18 11:21:46,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 13:22:36] 2026-04-18 11:21:46,913 | INFO     | did not find any defunct processes belonging to 4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:46,932 | INFO     | did not find any defunct processes belonging to 4099218
[2026-04-18 13:22:36] 2026-04-18 11:21:46,932 | INFO     | Ready for new job
[2026-04-18 13:22:36] 2026-04-18 11:21:46,933 | INFO     | **************************************
[2026-04-18 13:22:36] 2026-04-18 11:21:46,934 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 13:22:36] 2026-04-18 11:21:46,934 | INFO     | **************************************
[2026-04-18 13:22:36] 2026-04-18 11:21:46,934 | INFO     | 
[2026-04-18 13:22:36] 2026-04-18 11:21:46,939 | INFO     | architecture information:
[2026-04-18 13:22:36] 2026-04-18 11:21:46,939 | INFO     | executing command: cat /etc/os-release
[2026-04-18 13:22:36] 2026-04-18 11:21:46,956 | INFO     | cat /etc/os-release:
[2026-04-18 13:22:36] NAME="CentOS Linux"
[2026-04-18 13:22:36] VERSION="7 (Core)"
[2026-04-18 13:22:36] ID="centos"
[2026-04-18 13:22:36] ID_LIKE="rhel fedora"
[2026-04-18 13:22:36] VERSION_ID="7"
[2026-04-18 13:22:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 13:22:36] ANSI_COLOR="0;31"
[2026-04-18 13:22:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 13:22:36] HOME_URL="https://www.centos.org/"
[2026-04-18 13:22:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 13:22:36] 
[2026-04-18 13:22:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 13:22:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 13:22:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 13:22:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 13:22:36] 
[2026-04-18 13:22:36] 2026-04-18 11:21:46,956 | INFO     | **************************************
[2026-04-18 13:22:36] 2026-04-18 11:21:47,459 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/17
[2026-04-18 13:22:36] 2026-04-18 11:21:47,475 | INFO     | sufficient remaining disk space (178079662080 B)
[2026-04-18 13:22:36] 2026-04-18 11:21:47,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 13:22:36] 2026-04-18 11:21:47,476 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 13:22:36] 2026-04-18 11:21:47,476 | INFO     | update_server=False
[2026-04-18 13:22:36] 2026-04-18 11:21:47,476 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 13:22:36] 2026-04-18 11:21:47,490 | INFO     | all payload control threads have been joined
[2026-04-18 13:22:36] 2026-04-18 11:21:47,527 | INFO     | all data control threads have been joined
[2026-04-18 13:22:36] 2026-04-18 11:21:47,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 13:22:36] 2026-04-18 11:21:48,481 | INFO     | [job] retrieve thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:48,496 | INFO     | [payload] control thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:48,532 | INFO     | [data] control thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:48,618 | INFO     | [payload] failed_post thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:48,927 | WARNING  | process 4099218 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 13:22:36] 2026-04-18 11:21:49,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,092 | INFO     | all job control threads have been joined
[2026-04-18 13:22:36] 2026-04-18 11:21:49,178 | INFO     | using path: /var/lib/boinc/var/slot60/slots/17/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 13:22:36] 2026-04-18 11:21:49,318 | INFO     | [job] validate thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,430 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,521 | INFO     | number of running child processes to parent process 4099218: 1
[2026-04-18 13:22:36] 2026-04-18 11:21:49,521 | INFO     | maximum number of monitored processes: 6
[2026-04-18 13:22:36] 2026-04-18 11:21:49,521 | INFO     | aborting job monitoring since job object (job id=7097577793) has expired
[2026-04-18 13:22:36] 2026-04-18 11:21:49,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:22:36] 2026-04-18 11:21:49,521 | INFO     | will abort loop
[2026-04-18 13:22:36] 2026-04-18 11:21:49,587 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,612 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,651 | INFO     | [data] copytool_out thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:49,733 | INFO     | [data] copytool_in thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:50,058 | INFO     | [payload] validate_post thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:50,098 | INFO     | [job] control thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:50,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:22:36] 2026-04-18 11:21:50,527 | INFO     | [job] job monitor thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:50,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 13:22:36] 2026-04-18 11:21:51,393 | INFO     | [job] queue monitor thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:21:54,707 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 13:22:36] 2026-04-18 11:22:17,375 | INFO     | PID=4084935 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 13:22:36] 2026-04-18 11:22:17,375 | INFO     | .. there are 16 such processes running
[2026-04-18 13:22:36] 2026-04-18 11:22:17,376 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 13:22:36] 2026-04-18 11:22:17,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 13:22:36] 2026-04-18 11:22:17,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 13:22:36] 2026-04-18 11:22:30,775 | INFO     | [monitor] cgroup control has ended
[2026-04-18 13:22:36] 2026-04-18 11:22:31,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22552356529984)>', '<ExcThread(monitor, started 22552113317632)>']
[2026-04-18 13:22:36] 2026-04-18 11:22:31,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 13:22:36] 2026-04-18 11:22:31,446 | INFO     | [monitor] control thread has ended
[2026-04-18 13:22:36] 2026-04-18 11:22:36,302 | INFO     | all workflow threads have been joined
[2026-04-18 13:22:36] 2026-04-18 11:22:36,302 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 13:22:36] 2026-04-18 11:22:36,303 | INFO     | traces error code: 0
[2026-04-18 13:22:36] 2026-04-18 11:22:36,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 13:22:36] 2026-04-18 11:22:36,419 [wrapper] ==== pilot stdout END ====
[2026-04-18 13:22:36] 2026-04-18 11:22:36,421 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 13:22:36] 2026-04-18 11:22:36,424 [wrapper] pilotpid: 4084935
[2026-04-18 13:22:36] 2026-04-18 11:22:36,426 [wrapper] Pilot exit status: 0
[2026-04-18 13:22:36] 2026-04-18 11:22:36,432 [wrapper] pandaids: 7097577793
[2026-04-18 13:22:36] 2026-04-18 11:22:36,528 [wrapper] cleanup supervisor_pilot   64339 4084936
[2026-04-18 13:22:36] 2026-04-18 11:22:36,530 [wrapper] Test setup, not cleaning
[2026-04-18 13:22:36] 2026-04-18 11:22:36,532 [wrapper] apfmon messages muted
[2026-04-18 13:22:36] 2026-04-18 11:22:36,534 [wrapper] ==== wrapper stdout END ====
[2026-04-18 13:22:36] 2026-04-18 11:22:36,536 [wrapper] ==== wrapper stderr END ====
[2026-04-18 13:22:36]  *** Error codes and diagnostics ***
[2026-04-18 13:22:36]     "exeErrorCode": 0,
[2026-04-18 13:22:36]     "pilotErrorCode": 0,
[2026-04-18 13:22:36]  *** Listing of results directory ***
[2026-04-18 13:22:36] total 464572
[2026-04-18 13:22:36] -rwx------. 1 boinc boinc     36322 Apr 18 10:18 runpilot2-wrapper.sh
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc    644190 Apr 18 10:36 pilot3.tar.gz
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc      5094 Apr 18 10:37 queuedata.json
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc       100 Apr 18 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 13:22:36] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 12:53 run_atlas
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc       105 Apr 18 12:53 job.xml
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc      6625 Apr 18 12:53 init_data.xml
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc 284303256 Apr 18 12:53 EVNT.49539591._000410.pool.root.1
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc     15665 Apr 18 12:53 start_atlas.sh
[2026-04-18 13:22:36] drwxrwx--x. 2 boinc boinc      4096 Apr 18 12:53 shared
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc    656945 Apr 18 12:53 input.tar.gz
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc         0 Apr 18 12:53 boinc_lockfile
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc      2605 Apr 18 12:53 pandaJob.out
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc    997957 Apr 18 12:53 agis_schedconf.cvmfs.json
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc   1512404 Apr 18 12:53 agis_ddmendpoints.agis.ALL.json
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc       444 Apr 18 12:53 workernode_map.json
[2026-04-18 13:22:36] drwx------. 5 boinc boinc      4096 Apr 18 12:53 pilot3
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc       487 Apr 18 13:21 boinc_task_state.xml
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc 186272567 Apr 18 13:21 HITS.49545114._027463.pool.root.1
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc      1029 Apr 18 13:21 memory_monitor_summary.json
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc    335640 Apr 18 13:21 log.49545114._027463.job.log.tgz.1
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc      6379 Apr 18 13:21 heartbeat_new.json
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc      6270 Apr 18 13:21 heartbeat.json
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc        95 Apr 18 13:22 pilot_heartbeat.json
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc      8192 Apr 18 13:22 boinc_mmap_file
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc        27 Apr 18 13:22 wrapper_checkpoint.txt
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc      5363 Apr 18 13:22 pilotlog.txt
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc    206100 Apr 18 13:22 log.49545114._027463.job.log.1
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc       357 Apr 18 13:22 output.list
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc       410 Apr 18 13:22 runtime_log
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc    563200 Apr 18 13:22 result.tar.gz
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc      8845 Apr 18 13:22 runtime_log.err
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc       661 Apr 18 13:22 3e652c284c8c.diag
[2026-04-18 13:22:36] -rw-r--r--. 1 boinc boinc     21058 Apr 18 13:22 stderr.txt
[2026-04-18 13:22:36] HITS file was successfully produced:
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc 186272567 Apr 18 13:21 shared/HITS.pool.root.1
[2026-04-18 13:22:36]  *** Contents of shared directory: ***
[2026-04-18 13:22:36] total 460768
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc 284303256 Apr 18 12:53 ATLAS.root_0
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc     15665 Apr 18 12:53 start_atlas.sh
[2026-04-18 13:22:36] -rw-r--r--. 2 boinc boinc    656945 Apr 18 12:53 input.tar.gz
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc 186272567 Apr 18 13:21 HITS.pool.root.1
[2026-04-18 13:22:36] -rw-------. 1 boinc boinc    563200 Apr 18 13:22 result.tar.gz
13:22:38 (4080411): run_atlas exited; CPU time 17606.436498
13:22:38 (4080411): called boinc_finish(0)

</stderr_txt>
]]>

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