Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:13:58 (3905): wrapper (7.7.26015): starting
19:13:58 (3905): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 19:13:58] Arguments: --nthreads 8
[2026-04-18 19:13:58] Threads: 8
[2026-04-18 19:13:58] Checking for CVMFS
[2026-04-18 19:13:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 19:14:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 19:14:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 19:14:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 19:14:01] 2.11.2.0 7275 4329 97292 158591 0 54 17407311 25165824 1060 130560 0 829024 99.433 3621254 13139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 19:14:01] CVMFS is ok
[2026-04-18 19:14:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 19:14:01] Checking for apptainer binary...
[2026-04-18 19:14:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 19:14:01] Running /usr/bin/apptainer --version
[2026-04-18 19:14:01] apptainer version 1.3.2-1.el7
[2026-04-18 19:14:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 19:14:10] cg-vwn371.simple-grid.lan
[2026-04-18 19:14:10] apptainer works
[2026-04-18 19:14:10] Set ATHENA_PROC_NUMBER=8
[2026-04-18 19:14:10] Set ATHENA_CORE_NUMBER=8
[2026-04-18 19:14:10] Starting ATLAS job with PandaID=7097509131
[2026-04-18 19:14:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 23:39:26]  *** The last 200 lines of the pilot log: ***
[2026-04-18 23:39:26] 2026-04-18 21:38:33,432 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,432 | INFO     | log transfer has been attempted: DONE
[2026-04-18 23:39:26] 2026-04-18 21:38:33,432 | INFO     | job 7097509131 has finished - writing final server update
[2026-04-18 23:39:26] 2026-04-18 21:38:33,433 | INFO     | total number of processed events: 400 (read)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,435 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7097509131/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,436 | INFO     | extracted standard info from prmon json
[2026-04-18 23:39:26] 2026-04-18 21:38:33,436 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 23:39:26] 2026-04-18 21:38:33,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 23:39:26] 2026-04-18 21:38:33,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 23:39:26] 2026-04-18 21:38:33,442 | INFO     | fitting pss+swap vs Time
[2026-04-18 23:39:26] 2026-04-18 21:38:33,442 | INFO     | sum of square deviations: 4729621702.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,444 | INFO     | sum of deviations: 55831517214.00001
[2026-04-18 23:39:26] 2026-04-18 21:38:33,445 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,445 | INFO     | mean y: 2477414.3629032257
[2026-04-18 23:39:26] 2026-04-18 21:38:33,445 | INFO     | intersect: 2477414.3629032257
[2026-04-18 23:39:26] 2026-04-18 21:38:33,445 | INFO     | chi2: 8.846030422492491
[2026-04-18 23:39:26] 2026-04-18 21:38:33,446 | INFO     | sum of square deviations: 4449281562.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,448 | INFO     | sum of deviations: 88894943088.99998
[2026-04-18 23:39:26] 2026-04-18 21:38:33,448 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,448 | INFO     | mean y: 2495175.074074074
[2026-04-18 23:39:26] 2026-04-18 21:38:33,448 | INFO     | intersect: 2495175.074074074
[2026-04-18 23:39:26] 2026-04-18 21:38:33,449 | INFO     | chi2: 7.330532661470394
[2026-04-18 23:39:26] 2026-04-18 21:38:33,449 | INFO     | current chi2=7.330532661470394 (change=17.131952849367266 %)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,449 | INFO     | right removable region: 242
[2026-04-18 23:39:26] 2026-04-18 21:38:33,450 | INFO     | sum of square deviations: 4449281562.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,455 | INFO     | sum of deviations: -32292437115.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,455 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,455 | INFO     | mean y: 2525319.7942386833
[2026-04-18 23:39:26] 2026-04-18 21:38:33,455 | INFO     | intersect: 2525319.7942386833
[2026-04-18 23:39:26] 2026-04-18 21:38:33,456 | INFO     | chi2: 3.8582567538584844
[2026-04-18 23:39:26] 2026-04-18 21:38:33,456 | INFO     | current chi2=3.8582567538584844 (change=56.38431511553216 %)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,456 | INFO     | sum of square deviations: 4180243959.5
[2026-04-18 23:39:26] 2026-04-18 21:38:33,459 | INFO     | sum of deviations: -85293949700.50002
[2026-04-18 23:39:26] 2026-04-18 21:38:33,459 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,459 | INFO     | mean y: 2555250.4411764704
[2026-04-18 23:39:26] 2026-04-18 21:38:33,459 | INFO     | intersect: 2555250.4411764704
[2026-04-18 23:39:26] 2026-04-18 21:38:33,460 | INFO     | chi2: 1.9507985868890136
[2026-04-18 23:39:26] 2026-04-18 21:38:33,460 | INFO     | current chi2=1.9507985868890136 (change=49.43834194191198 %)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,460 | INFO     | sum of square deviations: 3922276332.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,462 | INFO     | sum of deviations: -88376590892.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,462 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,462 | INFO     | mean y: 2557022.60944206
[2026-04-18 23:39:26] 2026-04-18 21:38:33,463 | INFO     | intersect: 2557022.60944206
[2026-04-18 23:39:26] 2026-04-18 21:38:33,463 | INFO     | chi2: 1.8955064054206454
[2026-04-18 23:39:26] 2026-04-18 21:38:33,463 | INFO     | current chi2=1.8955064054206454 (change=2.8343357351177922 %)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,463 | INFO     | left removable region: 15
[2026-04-18 23:39:26] 2026-04-18 21:38:33,464 | INFO     | sum of square deviations: 3627000098.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,466 | INFO     | sum of deviations: -54173160295.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,466 | INFO     | mean x (centered): 0.0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,466 | INFO     | mean y: 2577878.6519823787
[2026-04-18 23:39:26] 2026-04-18 21:38:33,466 | INFO     | intersect: 2577878.6519823787
[2026-04-18 23:39:26] 2026-04-18 21:38:33,466 | INFO     | chi2: 0.19837425334975736
[2026-04-18 23:39:26] 2026-04-18 21:38:33,467 | INFO     | current memory leak: -14.94 B/s (using 227 data points, chi2=0.20)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,467 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | ..............................
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . Timing measurements:
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . get job = 0 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . initial setup = 125 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . payload setup = 175 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . stage-in = 0 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . payload execution = 15203 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . stage-out = 5 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | . log creation = 1 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,468 | INFO     | ..............................
[2026-04-18 23:39:26] 2026-04-18 21:38:33,618 | INFO     | 
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | job summary report
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | --------------------------------------------------
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | PanDA job id: 7097509131
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | task id: 49545114
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | errors: (none)
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | pilot state: finished 
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | transexitcode: 0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,619 | INFO     | exeerrorcode: 0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | exeerrordiag: 
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | exitcode: 0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | exitmsg: OK
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | cpuconsumptiontime: 57616 s
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | nevents: 400
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | neventsw: 0
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | pid: 12334
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | pgrp: 12334
[2026-04-18 23:39:26] 2026-04-18 21:38:33,620 | INFO     | corecount: 8
[2026-04-18 23:39:26] 2026-04-18 21:38:33,621 | INFO     | event service: False
[2026-04-18 23:39:26] 2026-04-18 21:38:33,621 | INFO     | sizes: {0: 2281569, 1: 2282026, 2: 2283454, 12: 2283482, 15383: 2314623, 15384: 2314622, 15389: 2323804, 15391: 2324054}
[2026-04-18 23:39:26] 2026-04-18 21:38:33,621 | INFO     | --------------------------------------------------
[2026-04-18 23:39:26] 2026-04-18 21:38:33,621 | INFO     | 
[2026-04-18 23:39:26] 2026-04-18 21:38:33,621 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-18 23:39:26] 2026-04-18 21:38:34,142 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 23:39:26] 2026-04-18 21:38:34,145 | INFO     | job 7097509131 has completed (purged errors)
[2026-04-18 23:39:26] 2026-04-18 21:38:34,146 | INFO     | overall cleanup function is called
[2026-04-18 23:39:26] 2026-04-18 21:38:35,155 | INFO     | --- collectZombieJob: --- 10, [12334]
[2026-04-18 23:39:26] 2026-04-18 21:38:35,155 | INFO     | zombie collector waiting for pid 12334
[2026-04-18 23:39:26] 2026-04-18 21:38:35,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 23:39:26] 2026-04-18 21:38:35,155 | INFO     | collected zombie processes
[2026-04-18 23:39:26] 2026-04-18 21:38:35,156 | INFO     | will attempt to kill all subprocesses of pid=12334
[2026-04-18 23:39:26] 2026-04-18 21:38:35,240 | INFO     | process IDs to be killed: [12334] (in reverse order)
[2026-04-18 23:39:26] 2026-04-18 21:38:36,145 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 23:39:26] 2026-04-18 21:38:36,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 23:39:26] 2026-04-18 21:38:36,147 | INFO     | did not find any defunct processes belonging to 12334
[2026-04-18 23:39:26] 2026-04-18 21:38:36,149 | INFO     | did not find any defunct processes belonging to 12334
[2026-04-18 23:39:26] 2026-04-18 21:38:36,149 | INFO     | Ready for new job
[2026-04-18 23:39:26] 2026-04-18 21:38:36,151 | INFO     | **************************************
[2026-04-18 23:39:26] 2026-04-18 21:38:36,151 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 23:39:26] 2026-04-18 21:38:36,151 | INFO     | **************************************
[2026-04-18 23:39:26] 2026-04-18 21:38:36,151 | INFO     | 
[2026-04-18 23:39:26] 2026-04-18 21:38:36,152 | INFO     | pilot is running in a VM
[2026-04-18 23:39:26] 2026-04-18 21:38:36,152 | INFO     | architecture information:
[2026-04-18 23:39:26] 2026-04-18 21:38:36,153 | INFO     | executing command: cat /etc/os-release
[2026-04-18 23:39:26] 2026-04-18 21:38:36,352 | INFO     | cat /etc/os-release:
[2026-04-18 23:39:26] NAME="CentOS Linux"
[2026-04-18 23:39:26] VERSION="7 (Core)"
[2026-04-18 23:39:26] ID="centos"
[2026-04-18 23:39:26] ID_LIKE="rhel fedora"
[2026-04-18 23:39:26] VERSION_ID="7"
[2026-04-18 23:39:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 23:39:26] ANSI_COLOR="0;31"
[2026-04-18 23:39:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 23:39:26] HOME_URL="https://www.centos.org/"
[2026-04-18 23:39:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 23:39:26] 
[2026-04-18 23:39:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 23:39:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 23:39:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 23:39:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 23:39:26] 
[2026-04-18 23:39:26] 2026-04-18 21:38:36,353 | INFO     | **************************************
[2026-04-18 23:39:26] 2026-04-18 21:38:36,856 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-18 23:39:26] 2026-04-18 21:38:37,070 | INFO     | sufficient remaining disk space (495865298944 B)
[2026-04-18 23:39:26] 2026-04-18 21:38:37,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 23:39:26] 2026-04-18 21:38:37,070 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 23:39:26] 2026-04-18 21:38:37,070 | INFO     | update_server=False
[2026-04-18 23:39:26] 2026-04-18 21:38:37,070 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 23:39:26] 2026-04-18 21:38:37,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 23:39:26] 2026-04-18 21:38:37,076 | INFO     | aborting loop
[2026-04-18 23:39:26] 2026-04-18 21:38:37,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 23:39:26] 2026-04-18 21:38:37,875 | INFO     | all payload control threads have been joined
[2026-04-18 23:39:26] 2026-04-18 21:38:37,878 | INFO     | all job control threads have been joined
[2026-04-18 23:39:26] 2026-04-18 21:38:38,009 | INFO     | all data control threads have been joined
[2026-04-18 23:39:26] 2026-04-18 21:38:38,076 | INFO     | [job] retrieve thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,082 | INFO     | [job] job monitor thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,107 | INFO     | [data] copytool_in thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 23:39:26] 2026-04-18 21:38:38,710 | INFO     | [payload] failed_post thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,739 | INFO     | [payload] validate_post thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,796 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,881 | INFO     | [payload] control thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,884 | INFO     | [job] control thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:38,992 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:39,015 | INFO     | [data] control thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:39,146 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:39,261 | INFO     | [data] copytool_out thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:39,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 23:39:26] 2026-04-18 21:38:39,398 | INFO     | [job] validate thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:39,641 | INFO     | [job] queue monitor thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:43,315 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:38:48,003 | INFO     | job.realtimelogging is not enabled
[2026-04-18 23:39:26] 2026-04-18 21:38:49,009 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 23:39:26] 2026-04-18 21:39:06,244 | INFO     | PID=7906 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-18 23:39:26] 2026-04-18 21:39:06,245 | INFO     | .. there are 2 such processes running
[2026-04-18 23:39:26] 2026-04-18 21:39:06,245 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 23:39:26] 2026-04-18 21:39:06,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 23:39:26] 2026-04-18 21:39:06,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 23:39:26] 2026-04-18 21:39:15,640 | INFO     | [monitor] cgroup control has ended
[2026-04-18 23:39:26] 2026-04-18 21:39:16,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133377115968)>', '<ExcThread(monitor, started 140132938135296)>']
[2026-04-18 23:39:26] 2026-04-18 21:39:16,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 23:39:26] 2026-04-18 21:39:16,305 | INFO     | [monitor] control thread has ended
[2026-04-18 23:39:26] 2026-04-18 21:39:21,229 | INFO     | all workflow threads have been joined
[2026-04-18 23:39:26] 2026-04-18 21:39:21,229 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 23:39:26] 2026-04-18 21:39:21,229 | INFO     | traces error code: 0
[2026-04-18 23:39:26] 2026-04-18 21:39:21,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 23:39:26] 2026-04-18 21:39:21,722 [wrapper] ==== pilot stdout END ====
[2026-04-18 23:39:26] 2026-04-18 21:39:21,839 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 23:39:26] 2026-04-18 21:39:21,901 [wrapper] pilotpid: 7906
[2026-04-18 23:39:26] 2026-04-18 21:39:22,014 [wrapper] Pilot exit status: 0
[2026-04-18 23:39:26] 2026-04-18 21:39:22,406 [wrapper] pandaids: 7097509131
[2026-04-18 23:39:26] 2026-04-18 21:39:23,587 [wrapper] cleanup supervisor_pilot 18238 7907
[2026-04-18 23:39:26] 2026-04-18 21:39:23,682 [wrapper] Test setup, not cleaning
[2026-04-18 23:39:26] 2026-04-18 21:39:23,780 [wrapper] apfmon messages muted
[2026-04-18 23:39:26] 2026-04-18 21:39:23,888 [wrapper] ==== wrapper stdout END ====
[2026-04-18 23:39:26] 2026-04-18 21:39:24,004 [wrapper] ==== wrapper stderr END ====
[2026-04-18 23:39:26]  *** Error codes and diagnostics ***
[2026-04-18 23:39:26]     "exeErrorCode": 0,
[2026-04-18 23:39:26]     "pilotErrorCode": 0,
[2026-04-18 23:39:26]  *** Listing of results directory ***
[2026-04-18 23:39:26] total 469648
[2026-04-18 23:39:26] -rwx------. 1 boinc boinc     36322 Apr 18 09:52 runpilot2-wrapper.sh
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc    644190 Apr 18 10:01 pilot3.tar.gz
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc      5094 Apr 18 10:13 queuedata.json
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc       100 Apr 18 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 23:39:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 19:13 run_atlas
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc       105 Apr 18 19:13 job.xml
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc 284413132 Apr 18 19:13 EVNT.49539591._000312.pool.root.1
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc     15665 Apr 18 19:13 start_atlas.sh
[2026-04-18 23:39:26] drwxrwx--x. 2 boinc boinc        68 Apr 18 19:13 shared
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc    656938 Apr 18 19:13 input.tar.gz
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc      6306 Apr 18 19:13 init_data.xml
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc         0 Apr 18 19:13 boinc_lockfile
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc      2603 Apr 18 19:14 pandaJob.out
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc       415 Apr 18 19:21 workernode_map.json
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc    997668 Apr 18 19:21 agis_schedconf.cvmfs.json
[2026-04-18 23:39:26] drwx------. 5 boinc boinc      4096 Apr 18 19:21 pilot3
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc 188812699 Apr 18 23:36 HITS.49545114._027291.pool.root.1
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc       489 Apr 18 23:37 boinc_task_state.xml
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc        95 Apr 18 23:38 pilot_heartbeat.json
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc      1011 Apr 18 23:38 memory_monitor_summary.json
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc   1512404 Apr 18 23:38 agis_ddmendpoints.agis.ALL.json
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc    407473 Apr 18 23:38 log.49545114._027291.job.log.tgz.1
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc      6333 Apr 18 23:38 heartbeat_new.json
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc      6224 Apr 18 23:38 heartbeat.json
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc      8192 Apr 18 23:39 boinc_mmap_file
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc        28 Apr 18 23:39 wrapper_checkpoint.txt
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc      4950 Apr 18 23:39 pilotlog.txt
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc   1417805 Apr 18 23:39 log.49545114._027291.job.log.1
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc       357 Apr 18 23:39 output.list
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc       410 Apr 18 23:39 runtime_log
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc   1843200 Apr 18 23:39 result.tar.gz
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc      8438 Apr 18 23:39 runtime_log.err
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc       655 Apr 18 23:39 3837e80d0d24.diag
[2026-04-18 23:39:26] -rw-r--r--. 1 boinc boinc     20620 Apr 18 23:39 stderr.txt
[2026-04-18 23:39:26] HITS file was successfully produced:
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc 188812699 Apr 18 23:36 shared/HITS.pool.root.1
[2026-04-18 23:39:26]  *** Contents of shared directory: ***
[2026-04-18 23:39:26] total 464596
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc 284413132 Apr 18 19:13 ATLAS.root_0
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc     15665 Apr 18 19:13 start_atlas.sh
[2026-04-18 23:39:26] -rw-r--r--. 2 boinc boinc    656938 Apr 18 19:13 input.tar.gz
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc 188812699 Apr 18 23:36 HITS.pool.root.1
[2026-04-18 23:39:26] -rw-------. 1 boinc boinc   1843200 Apr 18 23:39 result.tar.gz
23:39:28 (3905): run_atlas exited; CPU time 57783.348169
23:39:28 (3905): called boinc_finish(0)

</stderr_txt>
]]>

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