Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:34 (3095154): wrapper (7.7.26015): starting
03:02:34 (3095154): wrapper: running run_atlas (--nthreads 4)
[2026-04-20 03:02:34] Arguments: --nthreads 4
[2026-04-20 03:02:34] Threads: 4
[2026-04-20 03:02:34] Checking for CVMFS
[2026-04-20 03:02:34] No cvmfs_config command found, will try listing directly
[2026-04-20 03:02:34] CVMFS is ok
[2026-04-20 03:02:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-20 03:02:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-20 03:02:34] Further information can be found at the LHC@home message board.
[2026-04-20 03:02:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-20 03:02:34] Checking for apptainer binary...
[2026-04-20 03:02:34] which: no apptainer in ((null))
[2026-04-20 03:02:34] apptainer is not installed, using version from CVMFS
[2026-04-20 03:02:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-20 03:02:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-20 03:02:34] apptainer works
[2026-04-20 03:02:34] Set ATHENA_PROC_NUMBER=4
[2026-04-20 03:02:34] Set ATHENA_CORE_NUMBER=4
[2026-04-20 03:02:34] Starting ATLAS job with PandaID=7097407168
[2026-04-20 03:02:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-20 05:42:19]  *** The last 200 lines of the pilot log: ***
[2026-04-20 05:42:19] 2026-04-20 03:41:11,421 | INFO     | intersect: 2310547.013333333
[2026-04-20 05:42:19] 2026-04-20 03:41:11,421 | INFO     | chi2: 1.4077176057861411
[2026-04-20 05:42:19] 2026-04-20 03:41:11,421 | INFO     | current chi2=1.4077176057861411 (change=-0.07127727195420605 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,422 | INFO     | right removable region: 149
[2026-04-20 05:42:19] 2026-04-20 03:41:11,422 | INFO     | sum of square deviations: 1046484737.5
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | sum of deviations: 1772947127.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | mean y: 2341220.16
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | intersect: 2341220.16
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | chi2: 0.004182087799669246
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | current chi2=0.004182087799669246 (change=99.7027053820623 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,423 | INFO     | sum of square deviations: 945282840.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,424 | INFO     | sum of deviations: 960620436.0000002
[2026-04-20 05:42:19] 2026-04-20 03:41:11,424 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,424 | INFO     | mean y: 2342415.4689655174
[2026-04-20 05:42:19] 2026-04-20 03:41:11,425 | INFO     | intersect: 2342415.4689655174
[2026-04-20 05:42:19] 2026-04-20 03:41:11,425 | INFO     | chi2: 0.0006744710027149273
[2026-04-20 05:42:19] 2026-04-20 03:41:11,425 | INFO     | current chi2=0.0006744710027149273 (change=83.8723853963977 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,425 | INFO     | sum of square deviations: 850825255.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,426 | INFO     | sum of deviations: 1269968119.5000007
[2026-04-20 05:42:19] 2026-04-20 03:41:11,426 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,426 | INFO     | mean y: 2341919.2071428574
[2026-04-20 05:42:19] 2026-04-20 03:41:11,426 | INFO     | intersect: 2341919.2071428574
[2026-04-20 05:42:19] 2026-04-20 03:41:11,427 | INFO     | chi2: 0.00010370746797651071
[2026-04-20 05:42:19] 2026-04-20 03:41:11,427 | INFO     | current chi2=0.00010370746797651071 (change=84.6238804101199 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,427 | INFO     | sum of square deviations: 762879420.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | sum of deviations: 1005454338.0000001
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | mean y: 2342378.111111111
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | intersect: 2342378.111111111
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | chi2: 6.216331713071098e-05
[2026-04-20 05:42:19] 2026-04-20 03:41:11,428 | INFO     | current chi2=6.216331713071098e-05 (change=40.05897709816741 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,429 | INFO     | sum of square deviations: 681212772.5
[2026-04-20 05:42:19] 2026-04-20 03:41:11,429 | INFO     | sum of deviations: 806293791.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,429 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,429 | INFO     | mean y: 2342747.3846153845
[2026-04-20 05:42:19] 2026-04-20 03:41:11,429 | INFO     | intersect: 2342747.3846153845
[2026-04-20 05:42:19] 2026-04-20 03:41:11,430 | INFO     | chi2: 2.9231770615760093e-05
[2026-04-20 05:42:19] 2026-04-20 03:41:11,430 | INFO     | current chi2=2.9231770615760093e-05 (change=52.97585141041562 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,430 | INFO     | sum of square deviations: 605592750.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | sum of deviations: 696709852.9999999
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | mean y: 2342968.512
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | intersect: 2342968.512
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | chi2: 2.8112390358636347e-05
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | current chi2=2.8112390358636347e-05 (change=3.8293275896200436 %)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | left removable region: 30
[2026-04-20 05:42:19] 2026-04-20 03:41:11,431 | INFO     | sum of square deviations: 522502820.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,432 | INFO     | sum of deviations: 609452586.0000008
[2026-04-20 05:42:19] 2026-04-20 03:41:11,432 | INFO     | mean x (centered): 0.0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,432 | INFO     | mean y: 2342776.25210084
[2026-04-20 05:42:19] 2026-04-20 03:41:11,432 | INFO     | intersect: 2342776.25210084
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | chi2: 2.7931496201272773e-05
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | current memory leak: 1.17 B/s (using 119 data points, chi2=0.00)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | could have reported an average CPU frequency of 2683 MHz (9 samples)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | ..............................
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . Timing measurements:
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . get job = 0 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . initial setup = 8 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . payload setup = 15 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . stage-in = 0 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,433 | INFO     | . payload execution = 9459 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,434 | INFO     | . stage-out = 0 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,434 | INFO     | . log creation = 0 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,434 | INFO     | ..............................
[2026-04-20 05:42:19] 2026-04-20 03:41:11,534 | INFO     | 
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | job summary report
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | --------------------------------------------------
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | PanDA job id: 7097407168
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | task id: 49545114
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | errors: (none)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,535 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | pilot state: finished 
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | transexitcode: 0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | exeerrorcode: 0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | exeerrordiag: 
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | exitcode: 0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | exitmsg: OK
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | cpuconsumptiontime: 35919 s
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | nevents: 400
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | neventsw: 0
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | pid: 3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | pgrp: 3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | corecount: 4
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | event service: False
[2026-04-20 05:42:19] 2026-04-20 03:41:11,536 | INFO     | sizes: {0: 2281811, 1: 2283441, 11: 2283469, 9479: 2312246, 9480: 2321266, 9481: 2321350, 9483: 2321736}
[2026-04-20 05:42:19] 2026-04-20 03:41:11,537 | INFO     | --------------------------------------------------
[2026-04-20 05:42:19] 2026-04-20 03:41:11,537 | INFO     | 
[2026-04-20 05:42:19] 2026-04-20 03:41:11,537 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-04-20 05:42:19] 2026-04-20 03:41:11,568 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,570 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-20 05:42:19] 2026-04-20 03:41:11,571 | INFO     | job 7097407168 has completed (purged errors)
[2026-04-20 05:42:19] 2026-04-20 03:41:11,571 | INFO     | overall cleanup function is called
[2026-04-20 05:42:19] 2026-04-20 03:41:12,580 | INFO     | --- collectZombieJob: --- 10, [3104859]
[2026-04-20 05:42:19] 2026-04-20 03:41:12,580 | INFO     | zombie collector waiting for pid 3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:12,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-20 05:42:19] 2026-04-20 03:41:12,581 | INFO     | collected zombie processes
[2026-04-20 05:42:19] 2026-04-20 03:41:12,581 | INFO     | will attempt to kill all subprocesses of pid=3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:13,450 | INFO     | process IDs to be killed: [3104859] (in reverse order)
[2026-04-20 05:42:19] 2026-04-20 03:41:13,768 | WARNING  | found no corresponding commands to process id(s)
[2026-04-20 05:42:19] 2026-04-20 03:41:13,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-20 05:42:19] 2026-04-20 03:41:13,804 | INFO     | did not find any defunct processes belonging to 3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:13,835 | INFO     | did not find any defunct processes belonging to 3104859
[2026-04-20 05:42:19] 2026-04-20 03:41:13,835 | INFO     | Ready for new job
[2026-04-20 05:42:19] 2026-04-20 03:41:13,838 | INFO     | **************************************
[2026-04-20 05:42:19] 2026-04-20 03:41:13,838 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-20 05:42:19] 2026-04-20 03:41:13,838 | INFO     | **************************************
[2026-04-20 05:42:19] 2026-04-20 03:41:13,838 | INFO     | 
[2026-04-20 05:42:19] 2026-04-20 03:41:13,847 | INFO     | architecture information:
[2026-04-20 05:42:19] 2026-04-20 03:41:13,847 | INFO     | executing command: cat /etc/os-release
[2026-04-20 05:42:19] 2026-04-20 03:41:13,874 | INFO     | cat /etc/os-release:
[2026-04-20 05:42:19] NAME="CentOS Linux"
[2026-04-20 05:42:19] VERSION="7 (Core)"
[2026-04-20 05:42:19] ID="centos"
[2026-04-20 05:42:19] ID_LIKE="rhel fedora"
[2026-04-20 05:42:19] VERSION_ID="7"
[2026-04-20 05:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-20 05:42:19] ANSI_COLOR="0;31"
[2026-04-20 05:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-20 05:42:19] HOME_URL="https://www.centos.org/"
[2026-04-20 05:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-20 05:42:19] 
[2026-04-20 05:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-20 05:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-20 05:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-20 05:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-20 05:42:19] 
[2026-04-20 05:42:19] 2026-04-20 03:41:13,875 | INFO     | **************************************
[2026-04-20 05:42:19] 2026-04-20 03:41:14,377 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-04-20 05:42:19] 2026-04-20 03:41:14,405 | INFO     | sufficient remaining disk space (194711126016 B)
[2026-04-20 05:42:19] 2026-04-20 03:41:14,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-20 05:42:19] 2026-04-20 03:41:14,406 | INFO     | current server update state: UPDATING_FINAL
[2026-04-20 05:42:19] 2026-04-20 03:41:14,406 | INFO     | update_server=False
[2026-04-20 05:42:19] 2026-04-20 03:41:14,406 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-20 05:42:19] 2026-04-20 03:41:14,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-20 05:42:19] 2026-04-20 03:41:14,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-20 05:42:19] 2026-04-20 03:41:14,407 | INFO     | aborting loop
[2026-04-20 05:42:19] 2026-04-20 03:41:14,506 | INFO     | all payload control threads have been joined
[2026-04-20 05:42:19] 2026-04-20 03:41:15,298 | INFO     | all data control threads have been joined
[2026-04-20 05:42:19] 2026-04-20 03:41:15,411 | INFO     | [job] retrieve thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:15,413 | INFO     | [job] job monitor thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:15,511 | INFO     | [payload] control thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:15,513 | INFO     | all job control threads have been joined
[2026-04-20 05:42:19] 2026-04-20 03:41:15,543 | INFO     | [job] create_data_payload thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:15,574 | INFO     | [job] validate thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:15,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-20 05:42:19] 2026-04-20 03:41:16,009 | INFO     | [payload] execute_payloads thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,044 | INFO     | [payload] validate_pre thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,191 | INFO     | [payload] failed_post thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,303 | INFO     | [data] control thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,412 | INFO     | [data] copytool_out thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,518 | INFO     | [job] control thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-20 05:42:19] 2026-04-20 03:41:16,546 | INFO     | [data] copytool_in thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:16,939 | INFO     | [payload] validate_post thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:17,549 | INFO     | [job] queue monitor thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:19,773 | INFO     | [data] queue_monitor thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:25,358 | INFO     | job.realtimelogging is not enabled
[2026-04-20 05:42:19] 2026-04-20 03:41:26,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-20 05:42:19] 2026-04-20 03:41:44,181 | INFO     | PID=3099479 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-20 05:42:19] 2026-04-20 03:41:44,182 | INFO     | .. there are 22 such processes running
[2026-04-20 05:42:19] 2026-04-20 03:41:44,183 | INFO     | found 0 job(s) in 20 queues
[2026-04-20 05:42:19] 2026-04-20 03:41:44,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-20 05:42:19] 2026-04-20 03:41:44,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-20 05:42:19] 2026-04-20 03:42:12,665 | INFO     | [monitor] cgroup control has ended
[2026-04-20 05:42:19] 2026-04-20 03:42:13,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23353716840256)>', '<ExcThread(monitor, started 23353408603904)>']
[2026-04-20 05:42:19] 2026-04-20 03:42:14,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-20 05:42:19] 2026-04-20 03:42:14,318 | INFO     | [monitor] control thread has ended
[2026-04-20 05:42:19] 2026-04-20 03:42:18,875 | INFO     | all workflow threads have been joined
[2026-04-20 05:42:19] 2026-04-20 03:42:18,875 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-20 05:42:19] 2026-04-20 03:42:18,876 | INFO     | traces error code: 0
[2026-04-20 05:42:19] 2026-04-20 03:42:18,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-20 05:42:19] 2026-04-20 03:42:19,099 [wrapper] ==== pilot stdout END ====
[2026-04-20 05:42:19] 2026-04-20 03:42:19,103 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-20 05:42:19] 2026-04-20 03:42:19,108 [wrapper] pilotpid: 3099479
[2026-04-20 05:42:19] 2026-04-20 03:42:19,112 [wrapper] Pilot exit status: 0
[2026-04-20 05:42:19] 2026-04-20 03:42:19,129 [wrapper] pandaids: 7097407168
[2026-04-20 05:42:19] 2026-04-20 03:42:19,344 [wrapper] cleanup supervisor_pilot 3497730 3099480
[2026-04-20 05:42:19] 2026-04-20 03:42:19,349 [wrapper] Test setup, not cleaning
[2026-04-20 05:42:19] 2026-04-20 03:42:19,353 [wrapper] apfmon messages muted
[2026-04-20 05:42:19] 2026-04-20 03:42:19,357 [wrapper] ==== wrapper stdout END ====
[2026-04-20 05:42:19] 2026-04-20 03:42:19,361 [wrapper] ==== wrapper stderr END ====
[2026-04-20 05:42:19]  *** Error codes and diagnostics ***
[2026-04-20 05:42:19]     "exeErrorCode": 0,
[2026-04-20 05:42:19]     "pilotErrorCode": 0,
[2026-04-20 05:42:19]  *** Listing of results directory ***
[2026-04-20 05:42:19] total 454184
[2026-04-20 05:42:19] -rwx------. 1 boinc boinc     36322 Apr 18 09:41 runpilot2-wrapper.sh
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc    644190 Apr 18 10:01 pilot3.tar.gz
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc      5094 Apr 18 10:02 queuedata.json
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc       100 Apr 20 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-20 05:42:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 03:02 run_atlas
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc       105 Apr 20 03:02 job.xml
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc      6539 Apr 20 03:02 init_data.xml
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc 277005960 Apr 20 03:02 EVNT.49539591._000402.pool.root.1
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc     15665 Apr 20 03:02 start_atlas.sh
[2026-04-20 05:42:19] drwxrwx--x. 2 boinc boinc      4096 Apr 20 03:02 shared
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc    656944 Apr 20 03:02 input.tar.gz
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc         0 Apr 20 03:02 boinc_lockfile
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc      2605 Apr 20 03:02 pandaJob.out
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc    997737 Apr 20 03:02 agis_schedconf.cvmfs.json
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc   1512404 Apr 20 03:02 agis_ddmendpoints.agis.ALL.json
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc       443 Apr 20 03:02 workernode_map.json
[2026-04-20 05:42:19] drwx------. 5 boinc boinc      4096 Apr 20 03:02 pilot3
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc 181674413 Apr 20 05:40 HITS.49545114._026573.pool.root.1
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc       487 Apr 20 05:40 boinc_task_state.xml
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc      1026 Apr 20 05:41 memory_monitor_summary.json
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc    281061 Apr 20 05:41 log.49545114._026573.job.log.tgz.1
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc      6369 Apr 20 05:41 heartbeat_new.json
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc      6260 Apr 20 05:41 heartbeat.json
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc        95 Apr 20 05:41 pilot_heartbeat.json
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc      8192 Apr 20 05:42 boinc_mmap_file
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc        27 Apr 20 05:42 wrapper_checkpoint.txt
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc      4902 Apr 20 05:42 pilotlog.txt
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc    891328 Apr 20 05:42 log.49545114._026573.job.log.1
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc       357 Apr 20 05:42 output.list
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc       410 Apr 20 05:42 runtime_log
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc   1187840 Apr 20 05:42 result.tar.gz
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc      8826 Apr 20 05:42 runtime_log.err
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc       663 Apr 20 05:42 35a07040c5a2.diag
[2026-04-20 05:42:19] -rw-r--r--. 1 boinc boinc     20586 Apr 20 05:42 stderr.txt
[2026-04-20 05:42:19] HITS file was successfully produced:
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc 181674413 Apr 20 05:40 shared/HITS.pool.root.1
[2026-04-20 05:42:19]  *** Contents of shared directory: ***
[2026-04-20 05:42:19] total 449764
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc 277005960 Apr 20 03:02 ATLAS.root_0
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc     15665 Apr 20 03:02 start_atlas.sh
[2026-04-20 05:42:19] -rw-r--r--. 2 boinc boinc    656944 Apr 20 03:02 input.tar.gz
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc 181674413 Apr 20 05:40 HITS.pool.root.1
[2026-04-20 05:42:19] -rw-------. 1 boinc boinc   1187840 Apr 20 05:42 result.tar.gz
05:42:20 (3095154): run_atlas exited; CPU time 36550.128012
05:42:20 (3095154): called boinc_finish(0)

</stderr_txt>
]]>

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