Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:08 (1878266): wrapper (7.7.26015): starting
19:12:08 (1878266): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 19:12:08] Arguments: --nthreads 4
[2026-04-19 19:12:08] Threads: 4
[2026-04-19 19:12:08] Checking for CVMFS
[2026-04-19 19:12:08] No cvmfs_config command found, will try listing directly
[2026-04-19 19:12:08] CVMFS is ok
[2026-04-19 19:12:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 19:12:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 19:12:08] Further information can be found at the LHC@home message board.
[2026-04-19 19:12:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 19:12:08] Checking for apptainer binary...
[2026-04-19 19:12:08] which: no apptainer in ((null))
[2026-04-19 19:12:08] apptainer is not installed, using version from CVMFS
[2026-04-19 19:12:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 19:12:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-04-19 19:12:08] apptainer works
[2026-04-19 19:12:08] Set ATHENA_PROC_NUMBER=4
[2026-04-19 19:12:08] Set ATHENA_CORE_NUMBER=4
[2026-04-19 19:12:08] Starting ATLAS job with PandaID=7097407080
[2026-04-19 19:12:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 21:55:32]  *** The last 200 lines of the pilot log: ***
[2026-04-19 21:55:32] 2026-04-19 19:53:52,761 | INFO     | job 7097407080 has state=finished
[2026-04-19 21:55:32] 2026-04-19 19:53:52,761 | INFO     | preparing for final server update for job 7097407080 in state='finished'
[2026-04-19 21:55:32] 2026-04-19 19:53:52,761 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7097407080/jobReport.json
[2026-04-19 21:55:32] 2026-04-19 19:53:52,764 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/1/workernode_map.json
[2026-04-19 21:55:32] 2026-04-19 19:53:52,765 | INFO     | this job has now completed (state=finished)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,765 | INFO     | log transfer has been attempted: DONE
[2026-04-19 21:55:32] 2026-04-19 19:53:52,765 | INFO     | job 7097407080 has finished - writing final server update
[2026-04-19 21:55:32] 2026-04-19 19:53:52,765 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9276/.job.ad'
[2026-04-19 21:55:32] 2026-04-19 19:53:52,766 | INFO     | total number of processed events: 400 (read)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,775 | INFO     | monitor loop #660: job 0:7097407080 is in state 'finished'
[2026-04-19 21:55:32] 2026-04-19 19:53:52,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,792 | INFO     | using path: /var/lib/boinc/var/slot100/slots/1/PanDA_Pilot-7097407080/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,792 | INFO     | extracted standard info from prmon json
[2026-04-19 21:55:32] 2026-04-19 19:53:52,792 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 21:55:32] 2026-04-19 19:53:52,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 21:55:32] 2026-04-19 19:53:52,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 21:55:32] 2026-04-19 19:53:52,796 | INFO     | fitting pss+swap vs Time
[2026-04-19 21:55:32] 2026-04-19 19:53:52,796 | INFO     | sum of square deviations: 1223016419.5
[2026-04-19 21:55:32] 2026-04-19 19:53:52,797 | INFO     | sum of deviations: 19114479716.499996
[2026-04-19 21:55:32] 2026-04-19 19:53:52,798 | INFO     | mean x (centered): 0.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,798 | INFO     | mean y: 2334029.2974683545
[2026-04-19 21:55:32] 2026-04-19 19:53:52,798 | INFO     | intersect: 2334029.2974683545
[2026-04-19 21:55:32] 2026-04-19 19:53:52,798 | INFO     | chi2: 1.4305798864857975
[2026-04-19 21:55:32] 2026-04-19 19:53:52,798 | INFO     | sum of square deviations: 1110539892.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,799 | INFO     | sum of deviations: 18462143795.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,799 | INFO     | mean x (centered): 0.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | mean y: 2333144.5620915033
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | intersect: 2333144.5620915033
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | chi2: 1.4319627474041183
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | current chi2=1.4319627474041183 (change=-0.09666436187061395 %)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | right removable region: 152
[2026-04-19 21:55:32] 2026-04-19 19:53:52,800 | INFO     | sum of square deviations: 1110539892.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,801 | INFO     | sum of deviations: -3222533010.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,801 | INFO     | mean x (centered): 0.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,801 | INFO     | mean y: 2363886.2810457516
[2026-04-19 21:55:32] 2026-04-19 19:53:52,802 | INFO     | intersect: 2363886.2810457516
[2026-04-19 21:55:32] 2026-04-19 19:53:52,802 | INFO     | chi2: 0.0056291627285086085
[2026-04-19 21:55:32] 2026-04-19 19:53:52,802 | INFO     | current chi2=0.0056291627285086085 (change=99.60651182211596 %)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,802 | INFO     | sum of square deviations: 1005179777.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,803 | INFO     | sum of deviations: -3089135983.5000005
[2026-04-19 21:55:32] 2026-04-19 19:53:52,803 | INFO     | mean x (centered): 0.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,803 | INFO     | mean y: 2363685.5472972975
[2026-04-19 21:55:32] 2026-04-19 19:53:52,803 | INFO     | intersect: 2363685.5472972975
[2026-04-19 21:55:32] 2026-04-19 19:53:52,804 | INFO     | chi2: 0.005429571803714218
[2026-04-19 21:55:32] 2026-04-19 19:53:52,804 | INFO     | current chi2=0.005429571803714218 (change=3.5456591756278897 %)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,804 | INFO     | left removable region: 10
[2026-04-19 21:55:32] 2026-04-19 19:53:52,804 | INFO     | sum of square deviations: 887813855.5
[2026-04-19 21:55:32] 2026-04-19 19:53:52,805 | INFO     | sum of deviations: -3018636880.5000005
[2026-04-19 21:55:32] 2026-04-19 19:53:52,805 | INFO     | mean x (centered): 0.0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,805 | INFO     | mean y: 2363795.584507042
[2026-04-19 21:55:32] 2026-04-19 19:53:52,805 | INFO     | intersect: 2363795.584507042
[2026-04-19 21:55:32] 2026-04-19 19:53:52,806 | INFO     | chi2: 0.005283889848441711
[2026-04-19 21:55:32] 2026-04-19 19:53:52,806 | INFO     | current memory leak: -3.40 B/s (using 142 data points, chi2=0.01)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,806 | INFO     | could have reported an average CPU frequency of 2722 MHz (9 samples)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,806 | INFO     | ..............................
[2026-04-19 21:55:32] 2026-04-19 19:53:52,806 | INFO     | . Timing measurements:
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . get job = 0 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . initial setup = 8 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . payload setup = 16 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . stage-in = 0 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . payload execution = 9642 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . stage-out = 0 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | . log creation = 0 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,807 | INFO     | ..............................
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | 
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | job summary report
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | --------------------------------------------------
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | PanDA job id: 7097407080
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | task id: 49545114
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | errors: (none)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 21:55:32] 2026-04-19 19:53:52,905 | INFO     | pilot state: finished 
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | transexitcode: 0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | exeerrorcode: 0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | exeerrordiag: 
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | exitcode: 0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | exitmsg: OK
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | cpuconsumptiontime: 36862 s
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | nevents: 400
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | neventsw: 0
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | pid: 1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | pgrp: 1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | corecount: 4
[2026-04-19 21:55:32] 2026-04-19 19:53:52,906 | INFO     | event service: False
[2026-04-19 21:55:32] 2026-04-19 19:53:52,907 | INFO     | sizes: {0: 2281808, 1: 2283466, 11: 2283466, 9663: 2312486, 9664: 2321508, 9667: 2321564, 9668: 2321950}
[2026-04-19 21:55:32] 2026-04-19 19:53:52,907 | INFO     | --------------------------------------------------
[2026-04-19 21:55:32] 2026-04-19 19:53:52,907 | INFO     | 
[2026-04-19 21:55:32] 2026-04-19 19:53:52,907 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/1
[2026-04-19 21:55:32] 2026-04-19 19:53:52,940 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,940 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,940 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,940 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 21:55:32] 2026-04-19 19:53:52,942 | INFO     | job 7097407080 has completed (purged errors)
[2026-04-19 21:55:32] 2026-04-19 19:53:52,943 | INFO     | overall cleanup function is called
[2026-04-19 21:55:32] 2026-04-19 19:53:53,951 | INFO     | --- collectZombieJob: --- 10, [1897106]
[2026-04-19 21:55:32] 2026-04-19 19:53:53,951 | INFO     | zombie collector waiting for pid 1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:53,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 21:55:32] 2026-04-19 19:53:53,952 | INFO     | collected zombie processes
[2026-04-19 21:55:32] 2026-04-19 19:53:53,952 | INFO     | will attempt to kill all subprocesses of pid=1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:54,837 | INFO     | process IDs to be killed: [1897106] (in reverse order)
[2026-04-19 21:55:32] 2026-04-19 19:53:55,172 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 21:55:32] 2026-04-19 19:53:55,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 21:55:32] 2026-04-19 19:53:55,205 | INFO     | did not find any defunct processes belonging to 1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:55,230 | INFO     | did not find any defunct processes belonging to 1897106
[2026-04-19 21:55:32] 2026-04-19 19:53:55,231 | INFO     | Ready for new job
[2026-04-19 21:55:32] 2026-04-19 19:53:55,233 | INFO     | **************************************
[2026-04-19 21:55:32] 2026-04-19 19:53:55,233 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 21:55:32] 2026-04-19 19:53:55,233 | INFO     | **************************************
[2026-04-19 21:55:32] 2026-04-19 19:53:55,233 | INFO     | 
[2026-04-19 21:55:32] 2026-04-19 19:53:55,242 | INFO     | architecture information:
[2026-04-19 21:55:32] 2026-04-19 19:53:55,243 | INFO     | executing command: cat /etc/os-release
[2026-04-19 21:55:32] 2026-04-19 19:53:55,267 | INFO     | cat /etc/os-release:
[2026-04-19 21:55:32] NAME="CentOS Linux"
[2026-04-19 21:55:32] VERSION="7 (Core)"
[2026-04-19 21:55:32] ID="centos"
[2026-04-19 21:55:32] ID_LIKE="rhel fedora"
[2026-04-19 21:55:32] VERSION_ID="7"
[2026-04-19 21:55:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 21:55:32] ANSI_COLOR="0;31"
[2026-04-19 21:55:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 21:55:32] HOME_URL="https://www.centos.org/"
[2026-04-19 21:55:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 21:55:32] 
[2026-04-19 21:55:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 21:55:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 21:55:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 21:55:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 21:55:32] 
[2026-04-19 21:55:32] 2026-04-19 19:53:55,268 | INFO     | **************************************
[2026-04-19 21:55:32] 2026-04-19 19:53:55,770 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/1
[2026-04-19 21:55:32] 2026-04-19 19:53:55,798 | INFO     | sufficient remaining disk space (181027209216 B)
[2026-04-19 21:55:32] 2026-04-19 19:53:55,798 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 21:55:32] 2026-04-19 19:53:55,798 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 21:55:32] 2026-04-19 19:53:55,798 | INFO     | update_server=False
[2026-04-19 21:55:32] 2026-04-19 19:53:55,799 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 21:55:32] 2026-04-19 19:53:55,853 | INFO     | all data control threads have been joined
[2026-04-19 21:55:32] 2026-04-19 19:53:56,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 21:55:32] 2026-04-19 19:53:56,285 | INFO     | aborting loop
[2026-04-19 21:55:32] 2026-04-19 19:53:56,443 | INFO     | all job control threads have been joined
[2026-04-19 21:55:32] 2026-04-19 19:53:56,804 | INFO     | [job] retrieve thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:56,858 | INFO     | [data] control thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:56,879 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:56,879 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:56,884 | INFO     | [payload] failed_post thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:56,946 | INFO     | all payload control threads have been joined
[2026-04-19 21:55:32] 2026-04-19 19:53:57,173 | INFO     | [data] copytool_in thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:57,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 21:55:32] 2026-04-19 19:53:57,291 | INFO     | [job] job monitor thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:57,448 | INFO     | [job] control thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:57,664 | INFO     | [job] validate thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:57,709 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:57,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 21:55:32] 2026-04-19 19:53:57,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 21:55:32] 2026-04-19 19:53:57,951 | INFO     | [payload] control thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:58,405 | INFO     | [payload] validate_post thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:58,920 | INFO     | [job] queue monitor thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:53:59,247 | INFO     | [data] copytool_out thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:54:01,871 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:54:06,237 | INFO     | job.realtimelogging is not enabled
[2026-04-19 21:55:32] 2026-04-19 19:54:07,242 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 21:55:32] 2026-04-19 19:54:25,435 | INFO     | PID=1886643 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 21:55:32] 2026-04-19 19:54:25,435 | INFO     | .. there are 20 such processes running
[2026-04-19 21:55:32] 2026-04-19 19:54:25,436 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 21:55:32] 2026-04-19 19:54:25,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 21:55:32] 2026-04-19 19:54:25,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 21:55:32] 2026-04-19 19:54:49,262 | INFO     | [monitor] cgroup control has ended
[2026-04-19 21:55:32] 2026-04-19 19:54:49,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22540328154944)>', '<ExcThread(monitor, started 22540090357504)>']
[2026-04-19 21:55:32] 2026-04-19 19:54:49,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 21:55:32] 2026-04-19 19:54:49,556 | INFO     | [monitor] control thread has ended
[2026-04-19 21:55:32] 2026-04-19 19:54:54,457 | INFO     | all workflow threads have been joined
[2026-04-19 21:55:32] 2026-04-19 19:54:54,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 21:55:32] 2026-04-19 19:54:54,457 | INFO     | traces error code: 0
[2026-04-19 21:55:32] 2026-04-19 19:54:54,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 21:55:32] 2026-04-19 19:54:54,608 [wrapper] ==== pilot stdout END ====
[2026-04-19 21:55:32] 2026-04-19 19:54:54,613 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 21:55:32] 2026-04-19 19:54:54,622 [wrapper] pilotpid: 1886643
[2026-04-19 21:55:32] 2026-04-19 19:54:54,626 [wrapper] Pilot exit status: 0
[2026-04-19 21:55:32] 2026-04-19 19:54:54,642 [wrapper] pandaids: 7097407080
[2026-04-19 21:55:32] 2026-04-19 19:54:54,860 [wrapper] cleanup supervisor_pilot 2279237 1886644
[2026-04-19 21:55:32] 2026-04-19 19:54:54,864 [wrapper] Test setup, not cleaning
[2026-04-19 21:55:32] 2026-04-19 19:54:54,870 [wrapper] apfmon messages muted
[2026-04-19 21:55:32] 2026-04-19 19:54:54,874 [wrapper] ==== wrapper stdout END ====
[2026-04-19 21:55:32] 2026-04-19 19:54:54,878 [wrapper] ==== wrapper stderr END ====
[2026-04-19 21:55:32]  *** Error codes and diagnostics ***
[2026-04-19 21:55:32]     "exeErrorCode": 0,
[2026-04-19 21:55:32]     "pilotErrorCode": 0,
[2026-04-19 21:55:32]  *** Listing of results directory ***
[2026-04-19 21:55:32] total 460424
[2026-04-19 21:55:32] -rwx------. 1 boinc boinc     36322 Apr 18 09:41 runpilot2-wrapper.sh
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc    644190 Apr 18 10:01 pilot3.tar.gz
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc      5094 Apr 18 10:02 queuedata.json
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc       100 Apr 19 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 21:55:32] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 19:12 run_atlas
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc       105 Apr 19 19:12 job.xml
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc 280718839 Apr 19 19:12 EVNT.49539591._000398.pool.root.1
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc      6540 Apr 19 19:12 init_data.xml
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc     15665 Apr 19 19:12 start_atlas.sh
[2026-04-19 21:55:32] drwxrwx--x. 2 boinc boinc      4096 Apr 19 19:12 shared
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc    656944 Apr 19 19:12 input.tar.gz
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc         0 Apr 19 19:12 boinc_lockfile
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc      2603 Apr 19 19:12 pandaJob.out
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc    997671 Apr 19 19:12 agis_schedconf.cvmfs.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc   1512404 Apr 19 19:12 agis_ddmendpoints.agis.ALL.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc       443 Apr 19 19:12 workernode_map.json
[2026-04-19 21:55:32] drwx------. 5 boinc boinc      4096 Apr 19 19:12 pilot3
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc 184322026 Apr 19 21:53 HITS.49545114._026509.pool.root.1
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc       487 Apr 19 21:53 boinc_task_state.xml
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc      1032 Apr 19 21:53 memory_monitor_summary.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc    286142 Apr 19 21:53 log.49545114._026509.job.log.tgz.1
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc      6386 Apr 19 21:53 heartbeat_new.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc      6277 Apr 19 21:53 heartbeat.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc        95 Apr 19 21:54 pilot_heartbeat.json
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc      4902 Apr 19 21:54 pilotlog.txt
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc    900397 Apr 19 21:54 log.49545114._026509.job.log.1
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc       357 Apr 19 21:54 output.list
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc       410 Apr 19 21:54 runtime_log
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc   1208320 Apr 19 21:54 result.tar.gz
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc      8843 Apr 19 21:54 runtime_log.err
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc       664 Apr 19 21:54 35967fbb61ae.diag
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc        27 Apr 19 21:55 wrapper_checkpoint.txt
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc      8192 Apr 19 21:55 boinc_mmap_file
[2026-04-19 21:55:32] -rw-r--r--. 1 boinc boinc     21071 Apr 19 21:55 stderr.txt
[2026-04-19 21:55:32] HITS file was successfully produced:
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc 184322026 Apr 19 21:53 shared/HITS.pool.root.1
[2026-04-19 21:55:32]  *** Contents of shared directory: ***
[2026-04-19 21:55:32] total 455992
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc 280718839 Apr 19 19:12 ATLAS.root_0
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc     15665 Apr 19 19:12 start_atlas.sh
[2026-04-19 21:55:32] -rw-r--r--. 2 boinc boinc    656944 Apr 19 19:12 input.tar.gz
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc 184322026 Apr 19 21:53 HITS.pool.root.1
[2026-04-19 21:55:32] -rw-------. 1 boinc boinc   1208320 Apr 19 21:54 result.tar.gz
21:55:33 (1878266): run_atlas exited; CPU time 37455.494503
21:55:33 (1878266): called boinc_finish(0)

</stderr_txt>
]]>

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