Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:57:13 (3878): wrapper (7.7.26015): starting
04:57:13 (3878): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 04:57:13] Arguments: --nthreads 8
[2026-04-18 04:57:13] Threads: 8
[2026-04-18 04:57:13] Checking for CVMFS
[2026-04-18 04:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 04:57:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 04:57:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 04:57:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 04:57:14] 2.11.2.0 2886 59888 79028 158577 3 52 19408311 20275200 1 130560 0 13265904 99.938 2481504 11944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-18 04:57:14] CVMFS is ok
[2026-04-18 04:57:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 04:57:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 04:57:14] Further information can be found at the LHC@home message board.
[2026-04-18 04:57:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 04:57:14] Checking for apptainer binary...
[2026-04-18 04:57:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 04:57:14] Running /usr/bin/apptainer --version
[2026-04-18 04:57:14] apptainer version 1.3.2-1.el7
[2026-04-18 04:57:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 04:57:16] c-204-19.aglt2.org
[2026-04-18 04:57:16] apptainer works
[2026-04-18 04:57:16] Set ATHENA_PROC_NUMBER=8
[2026-04-18 04:57:16] Set ATHENA_CORE_NUMBER=8
[2026-04-18 04:57:16] Starting ATLAS job with PandaID=7097404101
[2026-04-18 04:57:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 07:00:00]  *** The last 200 lines of the pilot log: ***
[2026-04-18 07:00:00] 2026-04-18 10:59:14,643 | INFO     | job 7097404101 has state=finished
[2026-04-18 07:00:00] 2026-04-18 10:59:14,643 | INFO     | preparing for final server update for job 7097404101 in state='finished'
[2026-04-18 07:00:00] 2026-04-18 10:59:14,643 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7097404101/jobReport.json
[2026-04-18 07:00:00] 2026-04-18 10:59:14,646 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-18 07:00:00] 2026-04-18 10:59:14,646 | INFO     | this job has now completed (state=finished)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,646 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,647 | INFO     | log transfer has been attempted: DONE
[2026-04-18 07:00:00] 2026-04-18 10:59:14,647 | INFO     | job 7097404101 has finished - writing final server update
[2026-04-18 07:00:00] 2026-04-18 10:59:14,647 | INFO     | total number of processed events: 400 (read)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,649 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7097404101/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,649 | INFO     | extracted standard info from prmon json
[2026-04-18 07:00:00] 2026-04-18 10:59:14,649 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 07:00:00] 2026-04-18 10:59:14,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 07:00:00] 2026-04-18 10:59:14,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 07:00:00] 2026-04-18 10:59:14,652 | INFO     | fitting pss+swap vs Time
[2026-04-18 07:00:00] 2026-04-18 10:59:14,652 | INFO     | sum of square deviations: 522502820.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,653 | INFO     | sum of deviations: 9154230899.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,653 | INFO     | mean x (centered): 0.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,653 | INFO     | mean y: 2512910.117647059
[2026-04-18 07:00:00] 2026-04-18 10:59:14,653 | INFO     | intersect: 2512910.117647059
[2026-04-18 07:00:00] 2026-04-18 10:59:14,654 | INFO     | chi2: 1.5870600251757132
[2026-04-18 07:00:00] 2026-04-18 10:59:14,654 | INFO     | sum of square deviations: 459366752.5
[2026-04-18 07:00:00] 2026-04-18 10:59:14,654 | INFO     | sum of deviations: 8695408663.000008
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | mean x (centered): 0.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | mean y: 2511801.754385965
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | intersect: 2511801.754385965
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | chi2: 1.5897619233374307
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | current chi2=1.5897619233374307 (change=-0.17024549285200252 %)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,655 | INFO     | right removable region: 113
[2026-04-18 07:00:00] 2026-04-18 10:59:14,656 | INFO     | sum of square deviations: 459366752.5
[2026-04-18 07:00:00] 2026-04-18 10:59:14,656 | INFO     | sum of deviations: -9030004703.999998
[2026-04-18 07:00:00] 2026-04-18 10:59:14,656 | INFO     | mean x (centered): 0.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,656 | INFO     | mean y: 2555986.8771929825
[2026-04-18 07:00:00] 2026-04-18 10:59:14,657 | INFO     | intersect: 2555986.8771929825
[2026-04-18 07:00:00] 2026-04-18 10:59:14,657 | INFO     | chi2: 0.08390376586195965
[2026-04-18 07:00:00] 2026-04-18 10:59:14,657 | INFO     | current chi2=0.08390376586195965 (change=94.71325819244485 %)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,657 | INFO     | sum of square deviations: 401533110.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | sum of deviations: -6210248288.999998
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | mean x (centered): 0.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | mean y: 2548488.853211009
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | intersect: 2548488.853211009
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | chi2: 0.07346959256432135
[2026-04-18 07:00:00] 2026-04-18 10:59:14,658 | INFO     | current chi2=0.07346959256432135 (change=12.435881977937473 %)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,659 | INFO     | left removable region: 10
[2026-04-18 07:00:00] 2026-04-18 10:59:14,659 | INFO     | sum of square deviations: 338804492.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,659 | INFO     | sum of deviations: -6003001094.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,659 | INFO     | mean x (centered): 0.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,660 | INFO     | mean y: 2549095.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,660 | INFO     | intersect: 2549095.0
[2026-04-18 07:00:00] 2026-04-18 10:59:14,660 | INFO     | chi2: 0.07165902973682486
[2026-04-18 07:00:00] 2026-04-18 10:59:14,660 | INFO     | current memory leak: -17.72 B/s (using 103 data points, chi2=0.07)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,660 | INFO     | could have reported an average CPU frequency of 1762 MHz (8 samples)
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | ..............................
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . Timing measurements:
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . get job = 0 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . initial setup = 8 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . payload setup = 17 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . stage-in = 0 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . payload execution = 7256 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . stage-out = 0 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,661 | INFO     | . log creation = 0 s
[2026-04-18 07:00:00] 2026-04-18 10:59:14,662 | INFO     | ..............................
[2026-04-18 07:00:00] 2026-04-18 10:59:15,199 | INFO     | 
[2026-04-18 07:00:00] 2026-04-18 10:59:15,199 | INFO     | job summary report
[2026-04-18 07:00:00] 2026-04-18 10:59:15,200 | INFO     | --------------------------------------------------
[2026-04-18 07:00:00] 2026-04-18 10:59:15,200 | INFO     | PanDA job id: 7097404101
[2026-04-18 07:00:00] 2026-04-18 10:59:15,200 | INFO     | task id: 49545114
[2026-04-18 07:00:00] 2026-04-18 10:59:15,200 | INFO     | errors: (none)
[2026-04-18 07:00:00] 2026-04-18 10:59:15,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | pilot state: finished 
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | transexitcode: 0
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | exeerrorcode: 0
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | exeerrordiag: 
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | exitcode: 0
[2026-04-18 07:00:00] 2026-04-18 10:59:15,201 | INFO     | exitmsg: OK
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | cpuconsumptiontime: 54572 s
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | nevents: 400
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | neventsw: 0
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | pid: 12572
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | pgrp: 12572
[2026-04-18 07:00:00] 2026-04-18 10:59:15,202 | INFO     | corecount: 8
[2026-04-18 07:00:00] 2026-04-18 10:59:15,203 | INFO     | event service: False
[2026-04-18 07:00:00] 2026-04-18 10:59:15,203 | INFO     | sizes: {0: 2281625, 1: 2283454, 11: 2283454, 7277: 2310865, 7278: 2310864, 7279: 2319918, 7281: 2320296}
[2026-04-18 07:00:00] 2026-04-18 10:59:15,203 | INFO     | --------------------------------------------------
[2026-04-18 07:00:00] 2026-04-18 10:59:15,203 | INFO     | 
[2026-04-18 07:00:00] 2026-04-18 10:59:15,203 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 07:00:00] 2026-04-18 10:59:15,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,235 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 07:00:00] 2026-04-18 10:59:15,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,236 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 07:00:00] 2026-04-18 10:59:15,236 | INFO     | job 7097404101 has completed (purged errors)
[2026-04-18 07:00:00] 2026-04-18 10:59:15,236 | INFO     | overall cleanup function is called
[2026-04-18 07:00:00] 2026-04-18 10:59:16,241 | INFO     | --- collectZombieJob: --- 10, [12572]
[2026-04-18 07:00:00] 2026-04-18 10:59:16,241 | INFO     | zombie collector waiting for pid 12572
[2026-04-18 07:00:00] 2026-04-18 10:59:16,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 07:00:00] 2026-04-18 10:59:16,242 | INFO     | collected zombie processes
[2026-04-18 07:00:00] 2026-04-18 10:59:16,242 | INFO     | will attempt to kill all subprocesses of pid=12572
[2026-04-18 07:00:00] 2026-04-18 10:59:16,333 | INFO     | process IDs to be killed: [12572] (in reverse order)
[2026-04-18 07:00:00] 2026-04-18 10:59:16,388 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 07:00:00] 2026-04-18 10:59:16,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 07:00:00] 2026-04-18 10:59:16,393 | INFO     | did not find any defunct processes belonging to 12572
[2026-04-18 07:00:00] 2026-04-18 10:59:16,396 | INFO     | did not find any defunct processes belonging to 12572
[2026-04-18 07:00:00] 2026-04-18 10:59:16,397 | INFO     | Ready for new job
[2026-04-18 07:00:00] 2026-04-18 10:59:16,398 | INFO     | **************************************
[2026-04-18 07:00:00] 2026-04-18 10:59:16,398 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 07:00:00] 2026-04-18 10:59:16,398 | INFO     | **************************************
[2026-04-18 07:00:00] 2026-04-18 10:59:16,398 | INFO     | 
[2026-04-18 07:00:00] 2026-04-18 10:59:16,399 | INFO     | architecture information:
[2026-04-18 07:00:00] 2026-04-18 10:59:16,400 | INFO     | executing command: cat /etc/os-release
[2026-04-18 07:00:00] 2026-04-18 10:59:16,418 | INFO     | cat /etc/os-release:
[2026-04-18 07:00:00] NAME="CentOS Linux"
[2026-04-18 07:00:00] VERSION="7 (Core)"
[2026-04-18 07:00:00] ID="centos"
[2026-04-18 07:00:00] ID_LIKE="rhel fedora"
[2026-04-18 07:00:00] VERSION_ID="7"
[2026-04-18 07:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 07:00:00] ANSI_COLOR="0;31"
[2026-04-18 07:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 07:00:00] HOME_URL="https://www.centos.org/"
[2026-04-18 07:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 07:00:00] 
[2026-04-18 07:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 07:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 07:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 07:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 07:00:00] 
[2026-04-18 07:00:00] 2026-04-18 10:59:16,418 | INFO     | **************************************
[2026-04-18 07:00:00] 2026-04-18 10:59:16,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 07:00:00] 2026-04-18 10:59:16,941 | INFO     | sufficient remaining disk space (18395168768 B)
[2026-04-18 07:00:00] 2026-04-18 10:59:16,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 07:00:00] 2026-04-18 10:59:16,942 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 07:00:00] 2026-04-18 10:59:16,942 | INFO     | update_server=False
[2026-04-18 07:00:00] 2026-04-18 10:59:16,942 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 07:00:00] 2026-04-18 10:59:16,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 07:00:00] 2026-04-18 10:59:16,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 07:00:00] 2026-04-18 10:59:17,762 | INFO     | all data control threads have been joined
[2026-04-18 07:00:00] 2026-04-18 10:59:17,948 | INFO     | [job] retrieve thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,137 | INFO     | all payload control threads have been joined
[2026-04-18 07:00:00] 2026-04-18 10:59:18,157 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,160 | INFO     | all job control threads have been joined
[2026-04-18 07:00:00] 2026-04-18 10:59:18,170 | INFO     | [job] validate thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,286 | WARNING  | process 12572 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 07:00:00] 2026-04-18 10:59:18,316 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,332 | INFO     | [payload] failed_post thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,358 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 07:00:00] 2026-04-18 10:59:18,439 | INFO     | number of running child processes to parent process 12572: 1
[2026-04-18 07:00:00] 2026-04-18 10:59:18,440 | INFO     | maximum number of monitored processes: 6
[2026-04-18 07:00:00] 2026-04-18 10:59:18,440 | INFO     | aborting job monitoring since job object (job id=7097404101) has expired
[2026-04-18 07:00:00] 2026-04-18 10:59:18,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 07:00:00] 2026-04-18 10:59:18,440 | INFO     | will abort loop
[2026-04-18 07:00:00] 2026-04-18 10:59:18,491 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,687 | INFO     | [data] copytool_in thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,696 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,767 | INFO     | [data] control thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:18,949 | INFO     | [data] copytool_out thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:19,143 | INFO     | [payload] control thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:19,165 | INFO     | [job] control thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:19,222 | INFO     | [payload] validate_post thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:19,445 | INFO     | [job] job monitor thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:19,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 07:00:00] 2026-04-18 10:59:20,763 | INFO     | [job] queue monitor thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:20,949 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 07:00:00] 2026-04-18 10:59:47,886 | INFO     | PID=7930 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-18 07:00:00] 2026-04-18 10:59:47,887 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 07:00:00] 2026-04-18 10:59:47,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 07:00:00] 2026-04-18 10:59:47,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 07:00:00] 2026-04-18 10:59:54,236 | INFO     | [monitor] cgroup control has ended
[2026-04-18 07:00:00] 2026-04-18 10:59:55,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499583477568)>', '<ExcThread(monitor, started 140499134420736)>']
[2026-04-18 07:00:00] 2026-04-18 10:59:55,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 07:00:00] 2026-04-18 10:59:55,908 | INFO     | [monitor] control thread has ended
[2026-04-18 07:00:00] 2026-04-18 11:00:00,378 | INFO     | all workflow threads have been joined
[2026-04-18 07:00:00] 2026-04-18 11:00:00,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 07:00:00] 2026-04-18 11:00:00,379 | INFO     | traces error code: 0
[2026-04-18 07:00:00] 2026-04-18 11:00:00,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 07:00:00] 2026-04-18 11:00:00,500 [wrapper] ==== pilot stdout END ====
[2026-04-18 07:00:00] 2026-04-18 11:00:00,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 07:00:00] 2026-04-18 11:00:00,508 [wrapper] pilotpid: 7930
[2026-04-18 07:00:00] 2026-04-18 11:00:00,513 [wrapper] Pilot exit status: 0
[2026-04-18 07:00:00] 2026-04-18 11:00:00,532 [wrapper] pandaids: 7097404101
[2026-04-18 07:00:00] 2026-04-18 11:00:00,578 [wrapper] cleanup supervisor_pilot 28168 7931
[2026-04-18 07:00:00] 2026-04-18 11:00:00,583 [wrapper] Test setup, not cleaning
[2026-04-18 07:00:00] 2026-04-18 11:00:00,588 [wrapper] apfmon messages muted
[2026-04-18 07:00:00] 2026-04-18 11:00:00,593 [wrapper] ==== wrapper stdout END ====
[2026-04-18 07:00:00] 2026-04-18 11:00:00,598 [wrapper] ==== wrapper stderr END ====
[2026-04-18 07:00:00]  *** Error codes and diagnostics ***
[2026-04-18 07:00:00]     "exeErrorCode": 0,
[2026-04-18 07:00:00]     "pilotErrorCode": 0,
[2026-04-18 07:00:00]  *** Listing of results directory ***
[2026-04-18 07:00:00] total 460300
[2026-04-18 07:00:00] -rwx------ 1 boincer umatlas     36322 Apr 18 03:41 runpilot2-wrapper.sh
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 04:01 pilot3.tar.gz
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 04:02 queuedata.json
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas       100 Apr 18 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 07:00:00] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 04:57 run_atlas
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas       105 Apr 18 04:57 job.xml
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas 282087818 Apr 18 04:57 EVNT.49539591._000239.pool.root.1
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 04:57 start_atlas.sh
[2026-04-18 07:00:00] drwxrwx--x 2 boincer umatlas      4096 Apr 18 04:57 shared
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas    656941 Apr 18 04:57 input.tar.gz
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas         0 Apr 18 04:57 boinc_lockfile
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas      2603 Apr 18 04:57 pandaJob.out
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas        57 Apr 18 04:57 setup.sh.local
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas    997965 Apr 18 04:57 agis_schedconf.cvmfs.json
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas   1512404 Apr 18 04:57 agis_ddmendpoints.agis.ALL.json
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas       433 Apr 18 04:57 workernode_map.json
[2026-04-18 07:00:00] drwx------ 5 boincer umatlas      4096 Apr 18 04:57 pilot3
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas 183195799 Apr 18 06:58 HITS.49545114._026317.pool.root.1
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas       487 Apr 18 06:58 boinc_task_state.xml
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas      5826 Apr 18 06:58 init_data.xml
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas      1048 Apr 18 06:59 memory_monitor_summary.json
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas    319683 Apr 18 06:59 log.49545114._026317.job.log.tgz.1
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas      6416 Apr 18 06:59 heartbeat_new.json
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas      6307 Apr 18 06:59 heartbeat.json
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas        95 Apr 18 06:59 pilot_heartbeat.json
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 06:59 boinc_mmap_file
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas        27 Apr 18 06:59 wrapper_checkpoint.txt
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas      5257 Apr 18 07:00 pilotlog.txt
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas    680717 Apr 18 07:00 log.49545114._026317.job.log.1
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas       357 Apr 18 07:00 output.list
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas       410 Apr 18 07:00 runtime_log
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas   1013760 Apr 18 07:00 result.tar.gz
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas      8963 Apr 18 07:00 runtime_log.err
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas       659 Apr 18 07:00 358b7d49285f.diag
[2026-04-18 07:00:00] -rw-r--r-- 1 boincer umatlas     21185 Apr 18 07:00 stderr.txt
[2026-04-18 07:00:00] HITS file was successfully produced:
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas 183195799 Apr 18 06:58 shared/HITS.pool.root.1
[2026-04-18 07:00:00]  *** Contents of shared directory: ***
[2026-04-18 07:00:00] total 456040
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas 282087818 Apr 18 04:57 ATLAS.root_0
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas     15665 Apr 18 04:57 start_atlas.sh
[2026-04-18 07:00:00] -rw-r--r-- 2 boincer umatlas    656941 Apr 18 04:57 input.tar.gz
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas 183195799 Apr 18 06:58 HITS.pool.root.1
[2026-04-18 07:00:00] -rw------- 1 boincer umatlas   1013760 Apr 18 07:00 result.tar.gz
07:00:01 (3878): run_atlas exited; CPU time 54513.658950
07:00:01 (3878): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN