Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:21:20 (13879): wrapper (7.7.26015): starting
10:21:20 (13879): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 10:21:20] Arguments: --nthreads 8
[2026-04-18 10:21:20] Threads: 8
[2026-04-18 10:21:20] Checking for CVMFS
[2026-04-18 10:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 10:21:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 10:21:22] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 10:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 10:21:23] 2.11.2.0 6489 3797 83916 158577 3 11 19681957 25165824 1060 130560 0 1046053 99.848 415189 9013 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 10:21:23] CVMFS is ok
[2026-04-18 10:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 10:21:23] Checking for apptainer binary...
[2026-04-18 10:21:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 10:21:23] Running /usr/bin/apptainer --version
[2026-04-18 10:21:23] apptainer version 1.3.2-1.el7
[2026-04-18 10:21:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 10:21:33] cg-vwn368.simple-grid.lan
[2026-04-18 10:21:33] apptainer works
[2026-04-18 10:21:33] Set ATHENA_PROC_NUMBER=8
[2026-04-18 10:21:33] Set ATHENA_CORE_NUMBER=8
[2026-04-18 10:21:33] Starting ATLAS job with PandaID=7097147763
[2026-04-18 10:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 14:52:05]  *** The last 200 lines of the pilot log: ***
[2026-04-18 14:52:05] 2026-04-18 12:50:54,749 | INFO     | this job has now completed (state=finished)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,749 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,749 | INFO     | log transfer has been attempted: DONE
[2026-04-18 14:52:05] 2026-04-18 12:50:54,749 | INFO     | job 7097147763 has finished - writing final server update
[2026-04-18 14:52:05] 2026-04-18 12:50:54,750 | INFO     | total number of processed events: 400 (read)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,752 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7097147763/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,753 | INFO     | extracted standard info from prmon json
[2026-04-18 14:52:05] 2026-04-18 12:50:54,753 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 14:52:05] 2026-04-18 12:50:54,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 14:52:05] 2026-04-18 12:50:54,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 14:52:05] 2026-04-18 12:50:54,759 | INFO     | fitting pss+swap vs Time
[2026-04-18 14:52:05] 2026-04-18 12:50:54,760 | INFO     | sum of square deviations: 5141528960.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,763 | INFO     | sum of deviations: 76958155405.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,763 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,763 | INFO     | mean y: 2479005.168627451
[2026-04-18 14:52:05] 2026-04-18 12:50:54,763 | INFO     | intersect: 2479005.168627451
[2026-04-18 14:52:05] 2026-04-18 12:50:54,764 | INFO     | chi2: 7.241717067156058
[2026-04-18 14:52:05] 2026-04-18 12:50:54,764 | INFO     | sum of square deviations: 4844974562.5
[2026-04-18 14:52:05] 2026-04-18 12:50:54,771 | INFO     | sum of deviations: 92355907195.49998
[2026-04-18 14:52:05] 2026-04-18 12:50:54,771 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,772 | INFO     | mean y: 2486784.124
[2026-04-18 14:52:05] 2026-04-18 12:50:54,772 | INFO     | intersect: 2486784.124
[2026-04-18 14:52:05] 2026-04-18 12:50:54,772 | INFO     | chi2: 6.531609960727546
[2026-04-18 14:52:05] 2026-04-18 12:50:54,772 | INFO     | current chi2=6.531609960727546 (change=9.80578362622199 %)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,773 | INFO     | right removable region: 249
[2026-04-18 14:52:05] 2026-04-18 12:50:54,773 | INFO     | sum of square deviations: 4844974562.5
[2026-04-18 14:52:05] 2026-04-18 12:50:54,776 | INFO     | sum of deviations: -10658067650.500011
[2026-04-18 14:52:05] 2026-04-18 12:50:54,776 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,776 | INFO     | mean y: 2524025.436
[2026-04-18 14:52:05] 2026-04-18 12:50:54,776 | INFO     | intersect: 2524025.436
[2026-04-18 14:52:05] 2026-04-18 12:50:54,777 | INFO     | chi2: 2.604430986477083
[2026-04-18 14:52:05] 2026-04-18 12:50:54,777 | INFO     | current chi2=2.604430986477083 (change=64.03572574950257 %)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,777 | INFO     | sum of square deviations: 4560048290.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,780 | INFO     | sum of deviations: -58803914599.99999
[2026-04-18 14:52:05] 2026-04-18 12:50:54,780 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,780 | INFO     | mean y: 2549672.0857142857
[2026-04-18 14:52:05] 2026-04-18 12:50:54,780 | INFO     | intersect: 2549672.0857142857
[2026-04-18 14:52:05] 2026-04-18 12:50:54,781 | INFO     | chi2: 1.0169009428492841
[2026-04-18 14:52:05] 2026-04-18 12:50:54,781 | INFO     | current chi2=1.0169009428492841 (change=60.95496681888245 %)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,781 | INFO     | sum of square deviations: 4286517580.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,784 | INFO     | sum of deviations: -62957917610.000015
[2026-04-18 14:52:05] 2026-04-18 12:50:54,784 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,784 | INFO     | mean y: 2551955.65
[2026-04-18 14:52:05] 2026-04-18 12:50:54,784 | INFO     | intersect: 2551955.65
[2026-04-18 14:52:05] 2026-04-18 12:50:54,785 | INFO     | chi2: 0.9722556975763401
[2026-04-18 14:52:05] 2026-04-18 12:50:54,785 | INFO     | current chi2=0.9722556975763401 (change=4.39032391373846 %)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,785 | INFO     | left removable region: 15
[2026-04-18 14:52:05] 2026-04-18 12:50:54,786 | INFO     | sum of square deviations: 3972995422.5
[2026-04-18 14:52:05] 2026-04-18 12:50:54,788 | INFO     | sum of deviations: -45575778204.99999
[2026-04-18 14:52:05] 2026-04-18 12:50:54,788 | INFO     | mean x (centered): 0.0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,788 | INFO     | mean y: 2561904.9743589745
[2026-04-18 14:52:05] 2026-04-18 12:50:54,788 | INFO     | intersect: 2561904.9743589745
[2026-04-18 14:52:05] 2026-04-18 12:50:54,789 | INFO     | chi2: 0.18250937441057177
[2026-04-18 14:52:05] 2026-04-18 12:50:54,789 | INFO     | current memory leak: -11.47 B/s (using 234 data points, chi2=0.18)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | ..............................
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | . Timing measurements:
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | . get job = 0 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | . initial setup = 124 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,790 | INFO     | . payload setup = 167 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,791 | INFO     | . stage-in = 0 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,791 | INFO     | . payload execution = 15625 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,791 | INFO     | . stage-out = 3 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,791 | INFO     | . log creation = 1 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,791 | INFO     | ..............................
[2026-04-18 14:52:05] 2026-04-18 12:50:54,951 | INFO     | 
[2026-04-18 14:52:05] 2026-04-18 12:50:54,951 | INFO     | job summary report
[2026-04-18 14:52:05] 2026-04-18 12:50:54,951 | INFO     | --------------------------------------------------
[2026-04-18 14:52:05] 2026-04-18 12:50:54,951 | INFO     | PanDA job id: 7097147763
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | task id: 49545114
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | errors: (none)
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | pilot state: finished 
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | transexitcode: 0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | exeerrorcode: 0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | exeerrordiag: 
[2026-04-18 14:52:05] 2026-04-18 12:50:54,952 | INFO     | exitcode: 0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | exitmsg: OK
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | cpuconsumptiontime: 58781 s
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | nevents: 400
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | neventsw: 0
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | pid: 22280
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | pgrp: 22280
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | corecount: 8
[2026-04-18 14:52:05] 2026-04-18 12:50:54,953 | INFO     | event service: False
[2026-04-18 14:52:05] 2026-04-18 12:50:54,954 | INFO     | sizes: {0: 2280968, 1: 2274602, 2: 2283482, 15797: 2314690, 15802: 2323744, 15804: 2323882}
[2026-04-18 14:52:05] 2026-04-18 12:50:54,954 | INFO     | --------------------------------------------------
[2026-04-18 14:52:05] 2026-04-18 12:50:54,954 | INFO     | 
[2026-04-18 14:52:05] 2026-04-18 12:50:54,954 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-18 14:52:05] 2026-04-18 12:50:55,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | job 7097147763 has completed (purged errors)
[2026-04-18 14:52:05] 2026-04-18 12:50:55,462 | INFO     | overall cleanup function is called
[2026-04-18 14:52:05] 2026-04-18 12:50:56,471 | INFO     | --- collectZombieJob: --- 10, [22280]
[2026-04-18 14:52:05] 2026-04-18 12:50:56,471 | INFO     | zombie collector waiting for pid 22280
[2026-04-18 14:52:05] 2026-04-18 12:50:56,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 14:52:05] 2026-04-18 12:50:56,471 | INFO     | collected zombie processes
[2026-04-18 14:52:05] 2026-04-18 12:50:56,471 | INFO     | will attempt to kill all subprocesses of pid=22280
[2026-04-18 14:52:05] 2026-04-18 12:50:56,549 | INFO     | process IDs to be killed: [22280] (in reverse order)
[2026-04-18 14:52:05] 2026-04-18 12:50:57,460 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 14:52:05] 2026-04-18 12:50:57,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 14:52:05] 2026-04-18 12:50:57,463 | INFO     | did not find any defunct processes belonging to 22280
[2026-04-18 14:52:05] 2026-04-18 12:50:57,465 | INFO     | did not find any defunct processes belonging to 22280
[2026-04-18 14:52:05] 2026-04-18 12:50:57,465 | INFO     | Ready for new job
[2026-04-18 14:52:05] 2026-04-18 12:50:57,467 | INFO     | **************************************
[2026-04-18 14:52:05] 2026-04-18 12:50:57,467 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 14:52:05] 2026-04-18 12:50:57,467 | INFO     | **************************************
[2026-04-18 14:52:05] 2026-04-18 12:50:57,467 | INFO     | 
[2026-04-18 14:52:05] 2026-04-18 12:50:57,468 | INFO     | pilot is running in a VM
[2026-04-18 14:52:05] 2026-04-18 12:50:57,468 | INFO     | architecture information:
[2026-04-18 14:52:05] 2026-04-18 12:50:57,469 | INFO     | executing command: cat /etc/os-release
[2026-04-18 14:52:05] 2026-04-18 12:50:57,713 | INFO     | cat /etc/os-release:
[2026-04-18 14:52:05] NAME="CentOS Linux"
[2026-04-18 14:52:05] VERSION="7 (Core)"
[2026-04-18 14:52:05] ID="centos"
[2026-04-18 14:52:05] ID_LIKE="rhel fedora"
[2026-04-18 14:52:05] VERSION_ID="7"
[2026-04-18 14:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 14:52:05] ANSI_COLOR="0;31"
[2026-04-18 14:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 14:52:05] HOME_URL="https://www.centos.org/"
[2026-04-18 14:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 14:52:05] 
[2026-04-18 14:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 14:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 14:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 14:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 14:52:05] 
[2026-04-18 14:52:05] 2026-04-18 12:50:57,714 | INFO     | **************************************
[2026-04-18 14:52:05] 2026-04-18 12:50:58,217 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-18 14:52:05] 2026-04-18 12:50:58,436 | INFO     | sufficient remaining disk space (494615396352 B)
[2026-04-18 14:52:05] 2026-04-18 12:50:58,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 14:52:05] 2026-04-18 12:50:58,436 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 14:52:05] 2026-04-18 12:50:58,436 | INFO     | update_server=False
[2026-04-18 14:52:05] 2026-04-18 12:50:58,436 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 14:52:05] 2026-04-18 12:50:58,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 14:52:05] 2026-04-18 12:50:58,440 | INFO     | aborting loop
[2026-04-18 14:52:05] 2026-04-18 12:50:58,894 | INFO     | all payload control threads have been joined
[2026-04-18 14:52:05] 2026-04-18 12:50:58,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 14:52:05] 2026-04-18 12:50:59,047 | INFO     | all data control threads have been joined
[2026-04-18 14:52:05] 2026-04-18 12:50:59,442 | INFO     | [job] retrieve thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,443 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,446 | INFO     | [job] job monitor thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 14:52:05] 2026-04-18 12:50:59,605 | INFO     | all job control threads have been joined
[2026-04-18 14:52:05] 2026-04-18 12:50:59,867 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,900 | INFO     | [payload] control thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,901 | INFO     | [job] validate thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:50:59,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 14:52:05] 2026-04-18 12:51:00,053 | INFO     | [data] control thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,226 | INFO     | [payload] failed_post thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,384 | INFO     | [data] copytool_in thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,608 | INFO     | [payload] validate_post thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,610 | INFO     | [job] control thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,923 | INFO     | [data] copytool_out thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,941 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:00,972 | INFO     | [job] queue monitor thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:03,530 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 14:52:05] 2026-04-18 12:51:27,781 | INFO     | PID=17842 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 14:52:05] 2026-04-18 12:51:27,781 | INFO     | .. there are 2 such processes running
[2026-04-18 14:52:05] 2026-04-18 12:51:27,782 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 14:52:05] 2026-04-18 12:51:27,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 14:52:05] 2026-04-18 12:51:27,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 14:52:05] 2026-04-18 12:51:55,304 | INFO     | [monitor] cgroup control has ended
[2026-04-18 14:52:05] 2026-04-18 12:51:55,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560593905472)>', '<ExcThread(monitor, started 140559708579584)>']
[2026-04-18 14:52:05] 2026-04-18 12:51:55,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 14:52:05] 2026-04-18 12:51:55,950 | INFO     | [monitor] control thread has ended
[2026-04-18 14:52:05] 2026-04-18 12:52:00,903 | INFO     | all workflow threads have been joined
[2026-04-18 14:52:05] 2026-04-18 12:52:00,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 14:52:05] 2026-04-18 12:52:00,903 | INFO     | traces error code: 0
[2026-04-18 14:52:05] 2026-04-18 12:52:00,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 14:52:05] 2026-04-18 12:52:01,452 [wrapper] ==== pilot stdout END ====
[2026-04-18 14:52:05] 2026-04-18 12:52:01,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 14:52:05] 2026-04-18 12:52:01,645 [wrapper] pilotpid: 17842
[2026-04-18 14:52:05] 2026-04-18 12:52:01,736 [wrapper] Pilot exit status: 0
[2026-04-18 14:52:05] 2026-04-18 12:52:02,248 [wrapper] pandaids: 7097147763
[2026-04-18 14:52:05] 2026-04-18 12:52:03,329 [wrapper] cleanup supervisor_pilot 28466 17843
[2026-04-18 14:52:05] 2026-04-18 12:52:03,345 [wrapper] Test setup, not cleaning
[2026-04-18 14:52:05] 2026-04-18 12:52:03,348 [wrapper] apfmon messages muted
[2026-04-18 14:52:05] 2026-04-18 12:52:03,351 [wrapper] ==== wrapper stdout END ====
[2026-04-18 14:52:05] 2026-04-18 12:52:03,354 [wrapper] ==== wrapper stderr END ====
[2026-04-18 14:52:05]  *** Error codes and diagnostics ***
[2026-04-18 14:52:05]     "exeErrorCode": 0,
[2026-04-18 14:52:05]     "pilotErrorCode": 0,
[2026-04-18 14:52:05]  *** Listing of results directory ***
[2026-04-18 14:52:05] total 462528
[2026-04-18 14:52:05] -rwx------. 1 boinc boinc     36322 Apr 18 09:17 runpilot2-wrapper.sh
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc    644190 Apr 18 09:21 pilot3.tar.gz
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc      5094 Apr 18 09:31 queuedata.json
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc       100 Apr 18 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 14:52:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 10:21 run_atlas
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc       105 Apr 18 10:21 job.xml
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc      6305 Apr 18 10:21 init_data.xml
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc 277613673 Apr 18 10:21 EVNT.49539591._000286.pool.root.1
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc     15665 Apr 18 10:21 start_atlas.sh
[2026-04-18 14:52:05] drwxrwx--x. 2 boinc boinc        68 Apr 18 10:21 shared
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc    656944 Apr 18 10:21 input.tar.gz
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc         0 Apr 18 10:21 boinc_lockfile
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc      2603 Apr 18 10:21 pandaJob.out
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc       415 Apr 18 10:27 workernode_map.json
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc    997965 Apr 18 10:27 agis_schedconf.cvmfs.json
[2026-04-18 14:52:05] drwx------. 5 boinc boinc      4096 Apr 18 10:27 pilot3
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc 188217522 Apr 18 14:49 HITS.49545114._024449.pool.root.1
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc       489 Apr 18 14:49 boinc_task_state.xml
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc      1013 Apr 18 14:50 memory_monitor_summary.json
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc   1512404 Apr 18 14:50 agis_ddmendpoints.agis.ALL.json
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc    420301 Apr 18 14:50 log.49545114._024449.job.log.tgz.1
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc      6334 Apr 18 14:50 heartbeat_new.json
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc      6225 Apr 18 14:50 heartbeat.json
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc        95 Apr 18 14:50 pilot_heartbeat.json
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc      8192 Apr 18 14:51 boinc_mmap_file
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc        28 Apr 18 14:51 wrapper_checkpoint.txt
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc      4879 Apr 18 14:52 pilotlog.txt
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc   1454265 Apr 18 14:52 log.49545114._024449.job.log.1
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc       357 Apr 18 14:52 output.list
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc       410 Apr 18 14:52 runtime_log
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc   1894400 Apr 18 14:52 result.tar.gz
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc      8438 Apr 18 14:52 runtime_log.err
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc       656 Apr 18 14:52 300d94e8b32c.diag
[2026-04-18 14:52:05] -rw-r--r--. 1 boinc boinc     20567 Apr 18 14:52 stderr.txt
[2026-04-18 14:52:05] HITS file was successfully produced:
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc 188217522 Apr 18 14:49 shared/HITS.pool.root.1
[2026-04-18 14:52:05]  *** Contents of shared directory: ***
[2026-04-18 14:52:05] total 457428
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc 277613673 Apr 18 10:21 ATLAS.root_0
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc     15665 Apr 18 10:21 start_atlas.sh
[2026-04-18 14:52:05] -rw-r--r--. 2 boinc boinc    656944 Apr 18 10:21 input.tar.gz
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc 188217522 Apr 18 14:49 HITS.pool.root.1
[2026-04-18 14:52:05] -rw-------. 1 boinc boinc   1894400 Apr 18 14:52 result.tar.gz
14:52:07 (13879): run_atlas exited; CPU time 58949.900062
14:52:07 (13879): called boinc_finish(0)

</stderr_txt>
]]>

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