Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
12:25:20 (559816): wrapper (7.7.26015): starting
12:25:20 (559816): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 12:25:20] Arguments: --nthreads 4
[2026-04-19 12:25:20] Threads: 4
[2026-04-19 12:25:20] Checking for CVMFS
[2026-04-19 12:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-19 12:25:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-19 12:25:24] Running cvmfs_config stat atlas.cern.ch
[2026-04-19 12:25:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-19 12:25:25] 2.13.2.0 13030 1831 47228 158488 2 188 3673154 4194304 922 130560 0 2238571 99.999 3162 10 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-04-19 12:25:25] CVMFS is ok
[2026-04-19 12:25:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 12:25:25] Checking for apptainer binary...
[2026-04-19 12:25:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-19 12:25:25] Running /usr/bin/apptainer --version
[2026-04-19 12:25:25] apptainer version 1.4.0
[2026-04-19 12:25:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 12:25:25] rubble
[2026-04-19 12:25:25] apptainer works
[2026-04-19 12:25:25] Set ATHENA_PROC_NUMBER=4
[2026-04-19 12:25:25] Set ATHENA_CORE_NUMBER=4
[2026-04-19 12:25:25] Starting ATLAS job with PandaID=7096915425
[2026-04-19 12:25:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 13:57:02]  *** The last 200 lines of the pilot log: ***
[2026-04-19 13:57:02]  domain=
[2026-04-19 13:57:02]  filesize=243648
[2026-04-19 13:57:02]  filetype=log
[2026-04-19 13:57:02]  guid=c5b724c9-7997-4d8f-868a-d5b8ef4c37e9
[2026-04-19 13:57:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-19 13:57:02]  is_altstaged=None
[2026-04-19 13:57:02]  is_tar=False
[2026-04-19 13:57:02]  lfn=log.49545114._023306.job.log.tgz.1
[2026-04-19 13:57:02]  mtime=0
[2026-04-19 13:57:02]  protocol_id=None
[2026-04-19 13:57:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-19 13:57:02]  replicas=None
[2026-04-19 13:57:02]  scope=mc23_13p6TeV
[2026-04-19 13:57:02]  status=None
[2026-04-19 13:57:02]  status_code=0
[2026-04-19 13:57:02]  storage_token=
[2026-04-19 13:57:02]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/log.49545114._023306.job.log.tgz.1
[2026-04-19 13:57:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/df/log.49545114._023306.job.log.tgz.1
[2026-04-19 13:57:02]  workdir=None
[2026-04-19 13:57:02] ]
[2026-04-19 13:57:02] 2026-04-19 13:55:56,707 | INFO     | transferring file log.49545114._023306.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/log.49545114._023306.job.log.tgz.1 to /var/lib/boinc
[2026-04-19 13:57:02] 2026-04-19 13:55:56,707 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/log.49545114._023306.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.495451
[2026-04-19 13:57:02] 2026-04-19 13:55:56,718 | INFO     | adding to output.list: log.49545114._023306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/df/log.49545114._023306.job.log.tg
[2026-04-19 13:57:02] 2026-04-19 13:55:56,718 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-19 13:57:02] 2026-04-19 13:55:56,718 | INFO     | summary of transferred files:
[2026-04-19 13:57:02] 2026-04-19 13:55:56,718 | INFO     |  -- lfn=log.49545114._023306.job.log.tgz.1, status_code=0, status=transferred
[2026-04-19 13:57:02] 2026-04-19 13:55:56,719 | INFO     | stage-out finished correctly
[2026-04-19 13:57:02] 2026-04-19 13:55:59,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-19 13:57:02] 2026-04-19 13:56:01,248 | WARNING  | process 568334 can no longer be monitored (due to stat problems) - aborting
[2026-04-19 13:57:02] 2026-04-19 13:56:01,248 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 13:57:02] 2026-04-19 13:56:01,278 | INFO     | number of running child processes to parent process 568334: 1
[2026-04-19 13:57:02] 2026-04-19 13:56:01,279 | INFO     | maximum number of monitored processes: 6
[2026-04-19 13:57:02] 2026-04-19 13:56:02,317 | INFO     | job 7096915425 has state=finished
[2026-04-19 13:57:02] 2026-04-19 13:56:02,317 | INFO     | preparing for final server update for job 7096915425 in state='finished'
[2026-04-19 13:57:02] 2026-04-19 13:56:02,317 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/jobReport.json
[2026-04-19 13:57:02] 2026-04-19 13:56:02,318 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-04-19 13:57:02] 2026-04-19 13:56:02,318 | INFO     | this job has now completed (state=finished)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,318 | INFO     | log transfer has been attempted: DONE
[2026-04-19 13:57:02] 2026-04-19 13:56:02,318 | INFO     | job 7096915425 has finished - writing final server update
[2026-04-19 13:57:02] 2026-04-19 13:56:02,319 | INFO     | total number of processed events: 400 (read)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,320 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7096915425/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,320 | INFO     | extracted standard info from prmon json
[2026-04-19 13:57:02] 2026-04-19 13:56:02,320 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 13:57:02] 2026-04-19 13:56:02,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 13:57:02] 2026-04-19 13:56:02,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | fitting pss+swap vs Time
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | sum of square deviations: 170944600.5
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | sum of deviations: 930247438.0000002
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | mean x (centered): 0.0
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | mean y: 2571976.4146341463
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | intersect: 2571976.4146341463
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | chi2: 0.017197379712687436
[2026-04-19 13:57:02] 2026-04-19 13:56:02,321 | INFO     | current memory leak: 5.44 B/s (using 82 data points, chi2=0.02)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | could have reported an average CPU frequency of 4106 MHz (6 samples)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | ..............................
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . Timing measurements:
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . get job = 0 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . initial setup = 9 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . payload setup = 4 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . stage-in = 0 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . payload execution = 5388 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . stage-out = 0 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | . log creation = 0 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,322 | INFO     | ..............................
[2026-04-19 13:57:02] 2026-04-19 13:56:02,361 | INFO     | 
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | job summary report
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | --------------------------------------------------
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | PanDA job id: 7096915425
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | task id: 49545114
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | errors: (none)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | pilot state: finished 
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | transexitcode: 0
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | exeerrorcode: 0
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | exeerrordiag: 
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | exitcode: 0
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | exitmsg: OK
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | cpuconsumptiontime: 20258 s
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | nevents: 400
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | neventsw: 0
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | pid: 568334
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | pgrp: 568334
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | corecount: 4
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | event service: False
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | sizes: {0: 2283433, 11: 2283433, 5395: 2310081, 5396: 2319148, 5399: 2319148, 5402: 2319342}
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | --------------------------------------------------
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | 
[2026-04-19 13:57:02] 2026-04-19 13:56:02,362 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-04-19 13:57:02] 2026-04-19 13:56:02,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | job 7096915425 has completed (purged errors)
[2026-04-19 13:57:02] 2026-04-19 13:56:02,377 | INFO     | overall cleanup function is called
[2026-04-19 13:57:02] 2026-04-19 13:56:03,384 | INFO     | --- collectZombieJob: --- 10, [568334]
[2026-04-19 13:57:02] 2026-04-19 13:56:03,384 | INFO     | zombie collector waiting for pid 568334
[2026-04-19 13:57:02] 2026-04-19 13:56:03,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 13:57:02] 2026-04-19 13:56:03,385 | INFO     | collected zombie processes
[2026-04-19 13:57:02] 2026-04-19 13:56:03,385 | INFO     | will attempt to kill all subprocesses of pid=568334
[2026-04-19 13:57:02] 2026-04-19 13:56:03,416 | INFO     | process IDs to be killed: [568334] (in reverse order)
[2026-04-19 13:57:02] 2026-04-19 13:56:03,440 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 13:57:02] 2026-04-19 13:56:03,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 13:57:02] 2026-04-19 13:56:03,441 | INFO     | did not find any defunct processes belonging to 568334
[2026-04-19 13:57:02] 2026-04-19 13:56:03,442 | INFO     | did not find any defunct processes belonging to 568334
[2026-04-19 13:57:02] 2026-04-19 13:56:03,442 | INFO     | Ready for new job
[2026-04-19 13:57:02] 2026-04-19 13:56:03,443 | INFO     | **************************************
[2026-04-19 13:57:02] 2026-04-19 13:56:03,443 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 13:57:02] 2026-04-19 13:56:03,443 | INFO     | **************************************
[2026-04-19 13:57:02] 2026-04-19 13:56:03,443 | INFO     | 
[2026-04-19 13:57:02] 2026-04-19 13:56:03,443 | INFO     | architecture information:
[2026-04-19 13:57:02] 2026-04-19 13:56:03,444 | INFO     | executing command: cat /etc/os-release
[2026-04-19 13:57:02] 2026-04-19 13:56:03,453 | INFO     | cat /etc/os-release:
[2026-04-19 13:57:02] NAME="CentOS Linux"
[2026-04-19 13:57:02] VERSION="7 (Core)"
[2026-04-19 13:57:02] ID="centos"
[2026-04-19 13:57:02] ID_LIKE="rhel fedora"
[2026-04-19 13:57:02] VERSION_ID="7"
[2026-04-19 13:57:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 13:57:02] ANSI_COLOR="0;31"
[2026-04-19 13:57:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 13:57:02] HOME_URL="https://www.centos.org/"
[2026-04-19 13:57:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 13:57:02] 
[2026-04-19 13:57:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 13:57:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 13:57:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 13:57:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 13:57:02] 
[2026-04-19 13:57:02] 2026-04-19 13:56:03,453 | INFO     | **************************************
[2026-04-19 13:57:02] 2026-04-19 13:56:03,956 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | INFO     | sufficient remaining disk space (243890388992 B)
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | INFO     | update_server=False
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 13:57:02] 2026-04-19 13:56:03,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 13:57:02] 2026-04-19 13:56:04,525 | INFO     | all data control threads have been joined
[2026-04-19 13:57:02] 2026-04-19 13:56:04,599 | INFO     | all job control threads have been joined
[2026-04-19 13:57:02] 2026-04-19 13:56:04,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 13:57:02] 2026-04-19 13:56:04,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 13:57:02] 2026-04-19 13:56:04,788 | INFO     | aborting loop
[2026-04-19 13:57:02] 2026-04-19 13:56:04,948 | INFO     | all payload control threads have been joined
[2026-04-19 13:57:02] 2026-04-19 13:56:04,972 | INFO     | [job] retrieve thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:04,973 | INFO     | [job] queue monitor thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 13:57:02] 2026-04-19 13:56:05,426 | INFO     | [payload] validate_post thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,531 | INFO     | [data] control thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,531 | INFO     | [job] validate thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,604 | INFO     | [job] control thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,652 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,752 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,793 | INFO     | [job] job monitor thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,948 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:05,954 | INFO     | [payload] control thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:06,039 | INFO     | [data] copytool_in thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:06,471 | INFO     | [payload] failed_post thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:06,778 | INFO     | [data] copytool_out thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:09,397 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:14,109 | INFO     | job.realtimelogging is not enabled
[2026-04-19 13:57:02] 2026-04-19 13:56:15,115 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 13:57:02] 2026-04-19 13:56:34,403 | INFO     | PID=563903 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-19 13:57:02] 2026-04-19 13:56:34,403 | INFO     | .. there are 2 such processes running
[2026-04-19 13:57:02] 2026-04-19 13:56:34,403 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 13:57:02] 2026-04-19 13:56:34,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 13:57:02] 2026-04-19 13:56:34,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 13:57:02] 2026-04-19 13:56:56,740 | INFO     | [monitor] cgroup control has ended
[2026-04-19 13:57:02] 2026-04-19 13:56:56,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138237280307008)>', '<ExcThread(monitor, started 138236793968384)>']
[2026-04-19 13:57:02] 2026-04-19 13:56:57,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 13:57:02] 2026-04-19 13:56:57,517 | INFO     | [monitor] control thread has ended
[2026-04-19 13:57:02] 2026-04-19 13:57:01,999 | INFO     | all workflow threads have been joined
[2026-04-19 13:57:02] 2026-04-19 13:57:01,999 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 13:57:02] 2026-04-19 13:57:01,999 | INFO     | traces error code: 0
[2026-04-19 13:57:02] 2026-04-19 13:57:01,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 13:57:02] 2026-04-19 13:57:02,054 [wrapper] ==== pilot stdout END ====
[2026-04-19 13:57:02] 2026-04-19 13:57:02,055 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 13:57:02] 2026-04-19 13:57:02,056 [wrapper] pilotpid: 563903
[2026-04-19 13:57:02] 2026-04-19 13:57:02,058 [wrapper] Pilot exit status: 0
[2026-04-19 13:57:02] 2026-04-19 13:57:02,063 [wrapper] pandaids: 7096915425
[2026-04-19 13:57:02] 2026-04-19 13:57:02,077 [wrapper] cleanup supervisor_pilot  587045 563904
[2026-04-19 13:57:02] 2026-04-19 13:57:02,079 [wrapper] Test setup, not cleaning
[2026-04-19 13:57:02] 2026-04-19 13:57:02,080 [wrapper] apfmon messages muted
[2026-04-19 13:57:02] 2026-04-19 13:57:02,082 [wrapper] ==== wrapper stdout END ====
[2026-04-19 13:57:02] 2026-04-19 13:57:02,083 [wrapper] ==== wrapper stderr END ====
[2026-04-19 13:57:02]  *** Error codes and diagnostics ***
[2026-04-19 13:57:02]     "exeErrorCode": 0,
[2026-04-19 13:57:02]     "pilotErrorCode": 0,
[2026-04-19 13:57:02]  *** Listing of results directory ***
[2026-04-19 13:57:02] total 465248
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc    644190 Apr 18 06:34 pilot3.tar.gz
[2026-04-19 13:57:02] -rwx------ 1 boinc boinc     36322 Apr 18 06:38 runpilot2-wrapper.sh
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc      5094 Apr 18 07:02 queuedata.json
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc       100 Apr 19 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 13:57:02] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 12:25 run_atlas
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc       105 Apr 19 12:25 job.xml
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc 279643574 Apr 19 12:25 EVNT.49539591._000289.pool.root.1
[2026-04-19 13:57:02] drwxrwx--x 2 boinc boinc      4096 Apr 19 12:25 shared
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc    656938 Apr 19 12:25 input.tar.gz
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc     15665 Apr 19 12:25 start_atlas.sh
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc         0 Apr 19 12:25 boinc_setup_complete
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc      9657 Apr 19 12:25 init_data.xml
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc         0 Apr 19 12:25 boinc_lockfile
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc      2603 Apr 19 12:25 pandaJob.out
[2026-04-19 13:57:02] -rw------- 1 boinc boinc        50 Apr 19 12:25 setup.sh.local
[2026-04-19 13:57:02] -rw------- 1 boinc boinc    997908 Apr 19 12:25 agis_schedconf.cvmfs.json
[2026-04-19 13:57:02] -rw------- 1 boinc boinc   1512404 Apr 19 12:25 agis_ddmendpoints.agis.ALL.json
[2026-04-19 13:57:02] -rw------- 1 boinc boinc       416 Apr 19 12:25 workernode_map.json
[2026-04-19 13:57:02] drwx------ 5 boinc boinc      4096 Apr 19 12:25 pilot3
[2026-04-19 13:57:02] -rw------- 1 boinc boinc 191163705 Apr 19 13:55 HITS.49545114._023306.pool.root.1
[2026-04-19 13:57:02] -rw------- 1 boinc boinc      1016 Apr 19 13:55 memory_monitor_summary.json
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc       487 Apr 19 13:55 boinc_task_state.xml
[2026-04-19 13:57:02] -rw------- 1 boinc boinc    243648 Apr 19 13:55 log.49545114._023306.job.log.tgz.1
[2026-04-19 13:57:02] -rw------- 1 boinc boinc      6280 Apr 19 13:56 heartbeat_new.json
[2026-04-19 13:57:02] -rw------- 1 boinc boinc      6171 Apr 19 13:56 heartbeat.json
[2026-04-19 13:57:02] -rw------- 1 boinc boinc        95 Apr 19 13:56 pilot_heartbeat.json
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc      8192 Apr 19 13:56 boinc_mmap_file
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc        27 Apr 19 13:56 wrapper_checkpoint.txt
[2026-04-19 13:57:02] -rw------- 1 boinc boinc      4897 Apr 19 13:57 pilotlog.txt
[2026-04-19 13:57:02] -rw------- 1 boinc boinc    528058 Apr 19 13:57 log.49545114._023306.job.log.1
[2026-04-19 13:57:02] -rw------- 1 boinc boinc       357 Apr 19 13:57 output.list
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc       410 Apr 19 13:57 runtime_log
[2026-04-19 13:57:02] -rw------- 1 boinc boinc    788480 Apr 19 13:57 result.tar.gz
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc      9009 Apr 19 13:57 runtime_log.err
[2026-04-19 13:57:02] -rw------- 1 boinc boinc       640 Apr 19 13:57 26ebfb1b7787.diag
[2026-04-19 13:57:02] -rw-r--r-- 1 boinc boinc     20766 Apr 19 13:57 stderr.txt
[2026-04-19 13:57:02] HITS file was successfully produced:
[2026-04-19 13:57:02] -rw------- 1 boinc boinc 191163705 Apr 19 13:55 shared/HITS.pool.root.1
[2026-04-19 13:57:02]  *** Contents of shared directory: ***
[2026-04-19 13:57:02] total 461212
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc 279643574 Apr 19 12:25 ATLAS.root_0
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc    656938 Apr 19 12:25 input.tar.gz
[2026-04-19 13:57:02] -rw-r--r-- 2 boinc boinc     15665 Apr 19 12:25 start_atlas.sh
[2026-04-19 13:57:02] -rw------- 1 boinc boinc 191163705 Apr 19 13:55 HITS.pool.root.1
[2026-04-19 13:57:02] -rw------- 1 boinc boinc    788480 Apr 19 13:57 result.tar.gz
13:57:03 (559816): run_atlas exited; CPU time 20265.559702
13:57:03 (559816): called boinc_finish(0)

</stderr_txt>
]]>

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