Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:45:59 (12296): wrapper (7.7.26015): starting
16:45:59 (12296): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 16:45:59] Arguments: --nthreads 8
[2026-04-18 16:45:59] Threads: 8
[2026-04-18 16:45:59] Checking for CVMFS
[2026-04-18 16:45:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 16:45:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 16:45:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 16:45:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 16:45:59] 2.11.2.0 7387 4188 96248 158587 3 195 23738182 25165825 956 130560 0 1127159 99.748 3708992 26590 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 16:45:59] CVMFS is ok
[2026-04-18 16:45:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 16:45:59] Checking for apptainer binary...
[2026-04-18 16:45:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 16:45:59] Running /usr/bin/apptainer --version
[2026-04-18 16:45:59] apptainer version 1.3.2-1.el7
[2026-04-18 16:45:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 16:46:01] cg-vwn476.simple-grid.lan
[2026-04-18 16:46:01] apptainer works
[2026-04-18 16:46:01] Set ATHENA_PROC_NUMBER=8
[2026-04-18 16:46:01] Set ATHENA_CORE_NUMBER=8
[2026-04-18 16:46:01] Starting ATLAS job with PandaID=7096716487
[2026-04-18 16:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 20:43:08]  *** The last 200 lines of the pilot log: ***
[2026-04-18 20:43:08] 2026-04-18 18:42:13,124 | INFO     | this job has now completed (state=finished)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,124 | INFO     | log transfer has been attempted: DONE
[2026-04-18 20:43:08] 2026-04-18 18:42:13,124 | INFO     | job 7096716487 has finished - writing final server update
[2026-04-18 20:43:08] 2026-04-18 18:42:13,125 | INFO     | total number of processed events: 400 (read)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,127 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7096716487/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,128 | INFO     | extracted standard info from prmon json
[2026-04-18 20:43:08] 2026-04-18 18:42:13,128 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 20:43:08] 2026-04-18 18:42:13,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 20:43:08] 2026-04-18 18:42:13,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 20:43:08] 2026-04-18 18:42:13,133 | INFO     | fitting pss+swap vs Time
[2026-04-18 20:43:08] 2026-04-18 18:42:13,134 | INFO     | sum of square deviations: 3822136780.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,136 | INFO     | sum of deviations: 10754226189.999998
[2026-04-18 20:43:08] 2026-04-18 18:42:13,136 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,136 | INFO     | mean y: 2505550.670995671
[2026-04-18 20:43:08] 2026-04-18 18:42:13,137 | INFO     | intersect: 2505550.670995671
[2026-04-18 20:43:08] 2026-04-18 18:42:13,137 | INFO     | chi2: 2.4068979836882667
[2026-04-18 20:43:08] 2026-04-18 18:42:13,137 | INFO     | sum of square deviations: 3579276412.5
[2026-04-18 20:43:08] 2026-04-18 18:42:13,139 | INFO     | sum of deviations: 25990613338.5
[2026-04-18 20:43:08] 2026-04-18 18:42:13,140 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,140 | INFO     | mean y: 2514946.110619469
[2026-04-18 20:43:08] 2026-04-18 18:42:13,140 | INFO     | intersect: 2514946.110619469
[2026-04-18 20:43:08] 2026-04-18 18:42:13,140 | INFO     | chi2: 1.6200054365292884
[2026-04-18 20:43:08] 2026-04-18 18:42:13,141 | INFO     | current chi2=1.6200054365292884 (change=32.69322391276281 %)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,141 | INFO     | sum of square deviations: 3346927870.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,143 | INFO     | sum of deviations: 25342471228.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,143 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,143 | INFO     | mean y: 2514520.633484163
[2026-04-18 20:43:08] 2026-04-18 18:42:13,143 | INFO     | intersect: 2514520.633484163
[2026-04-18 20:43:08] 2026-04-18 18:42:13,144 | INFO     | chi2: 1.6209580047770649
[2026-04-18 20:43:08] 2026-04-18 18:42:13,144 | INFO     | current chi2=1.6209580047770649 (change=-0.058800311795079045 %)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,144 | INFO     | right removable region: 220
[2026-04-18 20:43:08] 2026-04-18 18:42:13,144 | INFO     | sum of square deviations: 3579276412.5
[2026-04-18 20:43:08] 2026-04-18 18:42:13,146 | INFO     | sum of deviations: -26796292005.499992
[2026-04-18 20:43:08] 2026-04-18 18:42:13,147 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,147 | INFO     | mean y: 2528914.650442478
[2026-04-18 20:43:08] 2026-04-18 18:42:13,147 | INFO     | intersect: 2528914.650442478
[2026-04-18 20:43:08] 2026-04-18 18:42:13,147 | INFO     | chi2: 0.8959332698412699
[2026-04-18 20:43:08] 2026-04-18 18:42:13,147 | INFO     | current chi2=0.8959332698412699 (change=62.77643357080031 %)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,148 | INFO     | sum of square deviations: 3346927870.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,150 | INFO     | sum of deviations: -28008542230.000004
[2026-04-18 20:43:08] 2026-04-18 18:42:13,150 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,150 | INFO     | mean y: 2529671.6923076925
[2026-04-18 20:43:08] 2026-04-18 18:42:13,150 | INFO     | intersect: 2529671.6923076925
[2026-04-18 20:43:08] 2026-04-18 18:42:13,151 | INFO     | chi2: 0.8764637907090531
[2026-04-18 20:43:08] 2026-04-18 18:42:13,151 | INFO     | current chi2=0.8764637907090531 (change=2.1730947814524297 %)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,151 | INFO     | left removable region: 10
[2026-04-18 20:43:08] 2026-04-18 18:42:13,151 | INFO     | sum of square deviations: 2871616632.5
[2026-04-18 20:43:08] 2026-04-18 18:42:13,157 | INFO     | sum of deviations: -12357640835.999998
[2026-04-18 20:43:08] 2026-04-18 18:42:13,158 | INFO     | mean x (centered): 0.0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,158 | INFO     | mean y: 2540240.580952381
[2026-04-18 20:43:08] 2026-04-18 18:42:13,158 | INFO     | intersect: 2540240.580952381
[2026-04-18 20:43:08] 2026-04-18 18:42:13,158 | INFO     | chi2: 0.06791431519617282
[2026-04-18 20:43:08] 2026-04-18 18:42:13,159 | INFO     | current memory leak: -4.30 B/s (using 210 data points, chi2=0.07)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,163 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | ..............................
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . Timing measurements:
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . get job = 0 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . initial setup = 8 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . payload setup = 18 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . stage-in = 0 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . payload execution = 14096 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . stage-out = 4 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | . log creation = 1 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,164 | INFO     | ..............................
[2026-04-18 20:43:08] 2026-04-18 18:42:13,324 | INFO     | 
[2026-04-18 20:43:08] 2026-04-18 18:42:13,324 | INFO     | job summary report
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | --------------------------------------------------
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | PanDA job id: 7096716487
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | task id: 49545114
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | errors: (none)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | pilot state: finished 
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | transexitcode: 0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | exeerrorcode: 0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,325 | INFO     | exeerrordiag: 
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | exitcode: 0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | exitmsg: OK
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | cpuconsumptiontime: 56271 s
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | nevents: 400
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | neventsw: 0
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | pid: 20599
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | pgrp: 20599
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | corecount: 8
[2026-04-18 20:43:08] 2026-04-18 18:42:13,326 | INFO     | event service: False
[2026-04-18 20:43:08] 2026-04-18 18:42:13,327 | INFO     | sizes: {0: 2281570, 1: 2283455, 12: 2283455, 14119: 2313948, 14124: 2322948, 14127: 2323004, 14129: 2323326}
[2026-04-18 20:43:08] 2026-04-18 18:42:13,327 | INFO     | --------------------------------------------------
[2026-04-18 20:43:08] 2026-04-18 18:42:13,327 | INFO     | 
[2026-04-18 20:43:08] 2026-04-18 18:42:13,327 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-18 20:43:08] 2026-04-18 18:42:13,788 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | job 7096716487 has completed (purged errors)
[2026-04-18 20:43:08] 2026-04-18 18:42:13,790 | INFO     | overall cleanup function is called
[2026-04-18 20:43:08] 2026-04-18 18:42:14,799 | INFO     | --- collectZombieJob: --- 10, [20599]
[2026-04-18 20:43:08] 2026-04-18 18:42:14,799 | INFO     | zombie collector waiting for pid 20599
[2026-04-18 20:43:08] 2026-04-18 18:42:14,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 20:43:08] 2026-04-18 18:42:14,800 | INFO     | collected zombie processes
[2026-04-18 20:43:08] 2026-04-18 18:42:14,800 | INFO     | will attempt to kill all subprocesses of pid=20599
[2026-04-18 20:43:08] 2026-04-18 18:42:14,880 | INFO     | process IDs to be killed: [20599] (in reverse order)
[2026-04-18 20:43:08] 2026-04-18 18:42:15,870 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 20:43:08] 2026-04-18 18:42:15,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 20:43:08] 2026-04-18 18:42:15,875 | INFO     | did not find any defunct processes belonging to 20599
[2026-04-18 20:43:08] 2026-04-18 18:42:15,877 | INFO     | did not find any defunct processes belonging to 20599
[2026-04-18 20:43:08] 2026-04-18 18:42:15,878 | INFO     | Ready for new job
[2026-04-18 20:43:08] 2026-04-18 18:42:15,879 | INFO     | **************************************
[2026-04-18 20:43:08] 2026-04-18 18:42:15,880 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 20:43:08] 2026-04-18 18:42:15,880 | INFO     | **************************************
[2026-04-18 20:43:08] 2026-04-18 18:42:15,880 | INFO     | 
[2026-04-18 20:43:08] 2026-04-18 18:42:15,880 | INFO     | pilot is running in a VM
[2026-04-18 20:43:08] 2026-04-18 18:42:15,880 | INFO     | architecture information:
[2026-04-18 20:43:08] 2026-04-18 18:42:15,887 | INFO     | executing command: cat /etc/os-release
[2026-04-18 20:43:08] 2026-04-18 18:42:16,174 | INFO     | cat /etc/os-release:
[2026-04-18 20:43:08] NAME="CentOS Linux"
[2026-04-18 20:43:08] VERSION="7 (Core)"
[2026-04-18 20:43:08] ID="centos"
[2026-04-18 20:43:08] ID_LIKE="rhel fedora"
[2026-04-18 20:43:08] VERSION_ID="7"
[2026-04-18 20:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 20:43:08] ANSI_COLOR="0;31"
[2026-04-18 20:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 20:43:08] HOME_URL="https://www.centos.org/"
[2026-04-18 20:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 20:43:08] 
[2026-04-18 20:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 20:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 20:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 20:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 20:43:08] 
[2026-04-18 20:43:08] 2026-04-18 18:42:16,174 | INFO     | **************************************
[2026-04-18 20:43:08] 2026-04-18 18:42:16,677 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-18 20:43:08] 2026-04-18 18:42:16,877 | INFO     | sufficient remaining disk space (496723034112 B)
[2026-04-18 20:43:08] 2026-04-18 18:42:16,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 20:43:08] 2026-04-18 18:42:16,877 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 20:43:08] 2026-04-18 18:42:16,877 | INFO     | update_server=False
[2026-04-18 20:43:08] 2026-04-18 18:42:16,878 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 20:43:08] 2026-04-18 18:42:16,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:43:08] 2026-04-18 18:42:16,879 | INFO     | aborting loop
[2026-04-18 20:43:08] 2026-04-18 18:42:16,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 20:43:08] 2026-04-18 18:42:17,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 20:43:08] 2026-04-18 18:42:17,883 | INFO     | [job] retrieve thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:17,884 | INFO     | [job] job monitor thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:17,898 | INFO     | all data control threads have been joined
[2026-04-18 20:43:08] 2026-04-18 18:42:18,056 | INFO     | [payload] failed_post thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,101 | INFO     | all payload control threads have been joined
[2026-04-18 20:43:08] 2026-04-18 18:42:18,188 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,189 | INFO     | [job] validate thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,207 | INFO     | [data] copytool_in thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,293 | INFO     | all job control threads have been joined
[2026-04-18 20:43:08] 2026-04-18 18:42:18,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:43:08] 2026-04-18 18:42:18,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,691 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,852 | INFO     | [payload] validate_post thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,872 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,885 | INFO     | [data] copytool_out thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:18,904 | INFO     | [data] control thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:19,107 | INFO     | [payload] control thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:19,298 | INFO     | [job] control thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:19,343 | INFO     | [job] queue monitor thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:21,085 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 20:43:08] 2026-04-18 18:42:45,175 | INFO     | PID=16186 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 20:43:08] 2026-04-18 18:42:45,175 | INFO     | .. there are 2 such processes running
[2026-04-18 20:43:08] 2026-04-18 18:42:45,175 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 20:43:08] 2026-04-18 18:42:45,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 20:43:08] 2026-04-18 18:42:45,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 20:43:08] 2026-04-18 18:42:56,157 | INFO     | [monitor] cgroup control has ended
[2026-04-18 20:43:08] 2026-04-18 18:42:57,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941783664448)>', '<ExcThread(monitor, started 139940755134208)>']
[2026-04-18 20:43:08] 2026-04-18 18:42:58,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 20:43:08] 2026-04-18 18:42:58,253 | INFO     | [monitor] control thread has ended
[2026-04-18 20:43:08] 2026-04-18 18:43:02,680 | INFO     | all workflow threads have been joined
[2026-04-18 20:43:08] 2026-04-18 18:43:02,680 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 20:43:08] 2026-04-18 18:43:02,681 | INFO     | traces error code: 0
[2026-04-18 20:43:08] 2026-04-18 18:43:02,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 20:43:08] 2026-04-18 18:43:03,105 [wrapper] ==== pilot stdout END ====
[2026-04-18 20:43:08] 2026-04-18 18:43:03,210 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 20:43:08] 2026-04-18 18:43:03,302 [wrapper] pilotpid: 16186
[2026-04-18 20:43:08] 2026-04-18 18:43:03,415 [wrapper] Pilot exit status: 0
[2026-04-18 20:43:08] 2026-04-18 18:43:03,920 [wrapper] pandaids: 7096716487
[2026-04-18 20:43:08] 2026-04-18 18:43:05,148 [wrapper] cleanup supervisor_pilot 26644 16187
[2026-04-18 20:43:08] 2026-04-18 18:43:05,231 [wrapper] Test setup, not cleaning
[2026-04-18 20:43:08] 2026-04-18 18:43:05,306 [wrapper] apfmon messages muted
[2026-04-18 20:43:08] 2026-04-18 18:43:05,387 [wrapper] ==== wrapper stdout END ====
[2026-04-18 20:43:08] 2026-04-18 18:43:05,457 [wrapper] ==== wrapper stderr END ====
[2026-04-18 20:43:08]  *** Error codes and diagnostics ***
[2026-04-18 20:43:08]     "exeErrorCode": 0,
[2026-04-18 20:43:08]     "pilotErrorCode": 0,
[2026-04-18 20:43:08]  *** Listing of results directory ***
[2026-04-18 20:43:08] total 465752
[2026-04-18 20:43:08] -rwx------. 1 boinc boinc     36322 Apr 18 08:23 runpilot2-wrapper.sh
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc    644190 Apr 18 08:34 pilot3.tar.gz
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc      5094 Apr 18 08:37 queuedata.json
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc       100 Apr 18 16:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 20:43:08] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 16:45 run_atlas
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc       105 Apr 18 16:45 job.xml
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc      6307 Apr 18 16:45 init_data.xml
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc 279362276 Apr 18 16:45 EVNT.49539591._000169.pool.root.1
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc     15665 Apr 18 16:45 start_atlas.sh
[2026-04-18 20:43:08] drwxrwx--x. 2 boinc boinc        68 Apr 18 16:45 shared
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc    656940 Apr 18 16:45 input.tar.gz
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc         0 Apr 18 16:45 boinc_lockfile
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc      2603 Apr 18 16:46 pandaJob.out
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc    997676 Apr 18 16:46 agis_schedconf.cvmfs.json
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc       415 Apr 18 16:46 workernode_map.json
[2026-04-18 20:43:08] drwx------. 5 boinc boinc      4096 Apr 18 16:46 pilot3
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc 190112193 Apr 18 20:40 HITS.49545114._021912.pool.root.1
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc       489 Apr 18 20:40 boinc_task_state.xml
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc      1023 Apr 18 20:41 memory_monitor_summary.json
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc   1512404 Apr 18 20:42 agis_ddmendpoints.agis.ALL.json
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc    399265 Apr 18 20:42 log.49545114._021912.job.log.tgz.1
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc        95 Apr 18 20:42 pilot_heartbeat.json
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc      6326 Apr 18 20:42 heartbeat_new.json
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc      6217 Apr 18 20:42 heartbeat.json
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc        28 Apr 18 20:42 wrapper_checkpoint.txt
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc      8192 Apr 18 20:42 boinc_mmap_file
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc      4880 Apr 18 20:43 pilotlog.txt
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc   1307122 Apr 18 20:43 log.49545114._021912.job.log.1
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc       357 Apr 18 20:43 output.list
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc       410 Apr 18 20:43 runtime_log
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc   1720320 Apr 18 20:43 result.tar.gz
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc      8454 Apr 18 20:43 runtime_log.err
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc       655 Apr 18 20:43 23737019c562.diag
[2026-04-18 20:43:08] -rw-r--r--. 1 boinc boinc     20631 Apr 18 20:43 stderr.txt
[2026-04-18 20:43:08] HITS file was successfully produced:
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc 190112193 Apr 18 20:40 shared/HITS.pool.root.1
[2026-04-18 20:43:08]  *** Contents of shared directory: ***
[2026-04-18 20:43:08] total 460816
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc 279362276 Apr 18 16:45 ATLAS.root_0
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc     15665 Apr 18 16:45 start_atlas.sh
[2026-04-18 20:43:08] -rw-r--r--. 2 boinc boinc    656940 Apr 18 16:45 input.tar.gz
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc 190112193 Apr 18 20:40 HITS.pool.root.1
[2026-04-18 20:43:08] -rw-------. 1 boinc boinc   1720320 Apr 18 20:43 result.tar.gz
20:43:10 (12296): run_atlas exited; CPU time 56404.964102
20:43:10 (12296): called boinc_finish(0)

</stderr_txt>
]]>

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