Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:27:28 (14448): wrapper (7.7.26015): starting
13:27:28 (14448): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 13:27:28] Arguments: --nthreads 8
[2026-04-18 13:27:28] Threads: 8
[2026-04-18 13:27:28] Checking for CVMFS
[2026-04-18 13:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 13:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 13:27:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 13:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 13:27:31] 2.11.2.0 7387 3989 97384 158583 1 53 23717016 25165824 1060 130560 0 1032363 99.727 3703320 27754 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 13:27:31] CVMFS is ok
[2026-04-18 13:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 13:27:31] Checking for apptainer binary...
[2026-04-18 13:27:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 13:27:31] Running /usr/bin/apptainer --version
[2026-04-18 13:27:31] apptainer version 1.3.2-1.el7
[2026-04-18 13:27:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 13:27:43] cg-vwn476.simple-grid.lan
[2026-04-18 13:27:43] apptainer works
[2026-04-18 13:27:43] Set ATHENA_PROC_NUMBER=8
[2026-04-18 13:27:43] Set ATHENA_CORE_NUMBER=8
[2026-04-18 13:27:44] Starting ATLAS job with PandaID=7096559391
[2026-04-18 13:27:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 16:45:54]  *** The last 200 lines of the pilot log: ***
[2026-04-18 16:45:54] 2026-04-18 14:45:17,024 | INFO     | this job has now completed (state=finished)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,024 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,024 | INFO     | log transfer has been attempted: DONE
[2026-04-18 16:45:54] 2026-04-18 14:45:17,024 | INFO     | job 7096559391 has finished - writing final server update
[2026-04-18 16:45:54] 2026-04-18 14:45:17,025 | INFO     | total number of processed events: 400 (read)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,027 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7096559391/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,027 | INFO     | extracted standard info from prmon json
[2026-04-18 16:45:54] 2026-04-18 14:45:17,028 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 16:45:54] 2026-04-18 14:45:17,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 16:45:54] 2026-04-18 14:45:17,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 16:45:54] 2026-04-18 14:45:17,032 | INFO     | fitting pss+swap vs Time
[2026-04-18 16:45:54] 2026-04-18 14:45:17,032 | INFO     | sum of square deviations: 1900284932.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,034 | INFO     | sum of deviations: 91433112951.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,034 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,034 | INFO     | mean y: 2412432.06010929
[2026-04-18 16:45:54] 2026-04-18 14:45:17,034 | INFO     | intersect: 2412432.06010929
[2026-04-18 16:45:54] 2026-04-18 14:45:17,035 | INFO     | chi2: 9.74084281832966
[2026-04-18 16:45:54] 2026-04-18 14:45:17,035 | INFO     | sum of square deviations: 1748737904.5
[2026-04-18 16:45:54] 2026-04-18 14:45:17,036 | INFO     | sum of deviations: 101622297086.49997
[2026-04-18 16:45:54] 2026-04-18 14:45:17,036 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,036 | INFO     | mean y: 2422395.2078651683
[2026-04-18 16:45:54] 2026-04-18 14:45:17,037 | INFO     | intersect: 2422395.2078651683
[2026-04-18 16:45:54] 2026-04-18 14:45:17,037 | INFO     | chi2: 9.000227949927144
[2026-04-18 16:45:54] 2026-04-18 14:45:17,037 | INFO     | current chi2=9.000227949927144 (change=7.603190834871884 %)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,037 | INFO     | right removable region: 177
[2026-04-18 16:45:54] 2026-04-18 14:45:17,037 | INFO     | sum of square deviations: 1748737904.5
[2026-04-18 16:45:54] 2026-04-18 14:45:17,039 | INFO     | sum of deviations: 26491712905.499992
[2026-04-18 16:45:54] 2026-04-18 14:45:17,039 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,039 | INFO     | mean y: 2477752.9831460672
[2026-04-18 16:45:54] 2026-04-18 14:45:17,039 | INFO     | intersect: 2477752.9831460672
[2026-04-18 16:45:54] 2026-04-18 14:45:17,039 | INFO     | chi2: 4.112233131887992
[2026-04-18 16:45:54] 2026-04-18 14:45:17,040 | INFO     | current chi2=4.112233131887992 (change=57.78360036618321 %)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,040 | INFO     | sum of square deviations: 1605470102.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,041 | INFO     | sum of deviations: -22567421225.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,041 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,042 | INFO     | mean y: 2529890.8670520233
[2026-04-18 16:45:54] 2026-04-18 14:45:17,042 | INFO     | intersect: 2529890.8670520233
[2026-04-18 16:45:54] 2026-04-18 14:45:17,042 | INFO     | chi2: 1.2081657339535326
[2026-04-18 16:45:54] 2026-04-18 14:45:17,042 | INFO     | current chi2=1.2081657339535326 (change=70.62020330061286 %)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,043 | INFO     | sum of square deviations: 1470248962.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,044 | INFO     | sum of deviations: -31424195628.000004
[2026-04-18 16:45:54] 2026-04-18 14:45:17,044 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,044 | INFO     | mean y: 2539774.488095238
[2026-04-18 16:45:54] 2026-04-18 14:45:17,044 | INFO     | intersect: 2539774.488095238
[2026-04-18 16:45:54] 2026-04-18 14:45:17,045 | INFO     | chi2: 1.0471926970579697
[2026-04-18 16:45:54] 2026-04-18 14:45:17,045 | INFO     | current chi2=1.0471926970579697 (change=13.323754545562544 %)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,045 | INFO     | left removable region: 15
[2026-04-18 16:45:54] 2026-04-18 14:45:17,045 | INFO     | sum of square deviations: 1318277740.5
[2026-04-18 16:45:54] 2026-04-18 14:45:17,046 | INFO     | sum of deviations: -18684339375.5
[2026-04-18 16:45:54] 2026-04-18 14:45:17,047 | INFO     | mean x (centered): 0.0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,047 | INFO     | mean y: 2554684.25308642
[2026-04-18 16:45:54] 2026-04-18 14:45:17,047 | INFO     | intersect: 2554684.25308642
[2026-04-18 16:45:54] 2026-04-18 14:45:17,047 | INFO     | chi2: 0.14454545610383313
[2026-04-18 16:45:54] 2026-04-18 14:45:17,047 | INFO     | current memory leak: -14.17 B/s (using 162 data points, chi2=0.14)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,048 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,048 | INFO     | ..............................
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . Timing measurements:
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . get job = 0 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . initial setup = 122 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . payload setup = 173 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . stage-in = 0 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . payload execution = 11253 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . stage-out = 1 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | . log creation = 0 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,049 | INFO     | ..............................
[2026-04-18 16:45:54] 2026-04-18 14:45:17,157 | INFO     | 
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | job summary report
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | --------------------------------------------------
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | PanDA job id: 7096559391
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | task id: 49545114
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | errors: (none)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,158 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | pilot state: finished 
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | transexitcode: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | exeerrorcode: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | exeerrordiag: 
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | exitcode: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | exitmsg: OK
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | cpuconsumptiontime: 54065 s
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | nevents: 400
[2026-04-18 16:45:54] 2026-04-18 14:45:17,159 | INFO     | neventsw: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | pid: 22886
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | pgrp: 22886
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | corecount: 8
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | event service: False
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | sizes: {0: 2281570, 1: 2281654, 2: 2283483, 13: 2283483, 11430: 2312832, 11433: 2321832, 11435: 2322210}
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | --------------------------------------------------
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | 
[2026-04-18 16:45:54] 2026-04-18 14:45:17,160 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-04-18 16:45:54] 2026-04-18 14:45:17,188 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,188 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 16:45:54] 2026-04-18 14:45:17,190 | INFO     | job 7096559391 has completed (purged errors)
[2026-04-18 16:45:54] 2026-04-18 14:45:17,191 | INFO     | overall cleanup function is called
[2026-04-18 16:45:54] 2026-04-18 14:45:18,199 | INFO     | --- collectZombieJob: --- 10, [22886]
[2026-04-18 16:45:54] 2026-04-18 14:45:18,199 | INFO     | zombie collector waiting for pid 22886
[2026-04-18 16:45:54] 2026-04-18 14:45:18,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 16:45:54] 2026-04-18 14:45:18,199 | INFO     | collected zombie processes
[2026-04-18 16:45:54] 2026-04-18 14:45:18,199 | INFO     | will attempt to kill all subprocesses of pid=22886
[2026-04-18 16:45:54] 2026-04-18 14:45:18,262 | INFO     | process IDs to be killed: [22886] (in reverse order)
[2026-04-18 16:45:54] 2026-04-18 14:45:18,319 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 16:45:54] 2026-04-18 14:45:18,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 16:45:54] 2026-04-18 14:45:18,322 | INFO     | did not find any defunct processes belonging to 22886
[2026-04-18 16:45:54] 2026-04-18 14:45:18,323 | INFO     | did not find any defunct processes belonging to 22886
[2026-04-18 16:45:54] 2026-04-18 14:45:18,324 | INFO     | Ready for new job
[2026-04-18 16:45:54] 2026-04-18 14:45:18,325 | INFO     | **************************************
[2026-04-18 16:45:54] 2026-04-18 14:45:18,325 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 16:45:54] 2026-04-18 14:45:18,326 | INFO     | **************************************
[2026-04-18 16:45:54] 2026-04-18 14:45:18,326 | INFO     | 
[2026-04-18 16:45:54] 2026-04-18 14:45:18,326 | INFO     | pilot is running in a VM
[2026-04-18 16:45:54] 2026-04-18 14:45:18,326 | INFO     | architecture information:
[2026-04-18 16:45:54] 2026-04-18 14:45:18,327 | INFO     | executing command: cat /etc/os-release
[2026-04-18 16:45:54] 2026-04-18 14:45:18,354 | INFO     | cat /etc/os-release:
[2026-04-18 16:45:54] NAME="CentOS Linux"
[2026-04-18 16:45:54] VERSION="7 (Core)"
[2026-04-18 16:45:54] ID="centos"
[2026-04-18 16:45:54] ID_LIKE="rhel fedora"
[2026-04-18 16:45:54] VERSION_ID="7"
[2026-04-18 16:45:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 16:45:54] ANSI_COLOR="0;31"
[2026-04-18 16:45:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 16:45:54] HOME_URL="https://www.centos.org/"
[2026-04-18 16:45:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 16:45:54] 
[2026-04-18 16:45:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 16:45:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 16:45:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 16:45:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 16:45:54] 
[2026-04-18 16:45:54] 2026-04-18 14:45:18,354 | INFO     | **************************************
[2026-04-18 16:45:54] 2026-04-18 14:45:18,857 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-04-18 16:45:54] 2026-04-18 14:45:18,878 | INFO     | sufficient remaining disk space (497660461056 B)
[2026-04-18 16:45:54] 2026-04-18 14:45:18,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 16:45:54] 2026-04-18 14:45:18,879 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 16:45:54] 2026-04-18 14:45:18,879 | INFO     | update_server=False
[2026-04-18 16:45:54] 2026-04-18 14:45:18,879 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 16:45:54] 2026-04-18 14:45:18,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 16:45:54] 2026-04-18 14:45:18,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 16:45:54] 2026-04-18 14:45:18,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 16:45:54] 2026-04-18 14:45:18,881 | INFO     | aborting loop
[2026-04-18 16:45:54] 2026-04-18 14:45:18,977 | INFO     | all job control threads have been joined
[2026-04-18 16:45:54] 2026-04-18 14:45:19,018 | INFO     | all payload control threads have been joined
[2026-04-18 16:45:54] 2026-04-18 14:45:19,885 | INFO     | [job] retrieve thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:19,886 | INFO     | [job] queue monitor thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:19,886 | INFO     | [job] job monitor thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:19,938 | INFO     | all data control threads have been joined
[2026-04-18 16:45:54] 2026-04-18 14:45:19,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 16:45:54] 2026-04-18 14:45:19,983 | INFO     | [job] control thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,024 | INFO     | [payload] control thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,169 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,209 | INFO     | [payload] failed_post thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,710 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,786 | INFO     | [payload] validate_post thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,804 | INFO     | [job] validate thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,908 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:20,944 | INFO     | [data] control thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:21,289 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:21,336 | INFO     | [data] copytool_in thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:21,958 | INFO     | [data] copytool_out thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:22,887 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 16:45:54] 2026-04-18 14:45:48,411 | INFO     | [monitor] cgroup control has ended
[2026-04-18 16:45:54] 2026-04-18 14:45:48,519 | INFO     | PID=18452 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 16:45:54] 2026-04-18 14:45:48,520 | INFO     | .. there are 2 such processes running
[2026-04-18 16:45:54] 2026-04-18 14:45:48,520 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 16:45:54] 2026-04-18 14:45:48,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 16:45:54] 2026-04-18 14:45:48,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 16:45:54] 2026-04-18 14:45:49,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491120707392)>', '<ExcThread(monitor, started 140490318014208)>']
[2026-04-18 16:45:54] 2026-04-18 14:45:49,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 16:45:54] 2026-04-18 14:45:49,526 | INFO     | [monitor] control thread has ended
[2026-04-18 16:45:54] 2026-04-18 14:45:54,349 | INFO     | all workflow threads have been joined
[2026-04-18 16:45:54] 2026-04-18 14:45:54,349 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 16:45:54] 2026-04-18 14:45:54,350 | INFO     | traces error code: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:54,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 16:45:54] 2026-04-18 14:45:54,496 [wrapper] ==== pilot stdout END ====
[2026-04-18 16:45:54] 2026-04-18 14:45:54,500 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 16:45:54] 2026-04-18 14:45:54,504 [wrapper] pilotpid: 18452
[2026-04-18 16:45:54] 2026-04-18 14:45:54,508 [wrapper] Pilot exit status: 0
[2026-04-18 16:45:54] 2026-04-18 14:45:54,526 [wrapper] pandaids: 7096559391
[2026-04-18 16:45:54] 2026-04-18 14:45:54,561 [wrapper] cleanup supervisor_pilot 11854 18453
[2026-04-18 16:45:54] 2026-04-18 14:45:54,565 [wrapper] Test setup, not cleaning
[2026-04-18 16:45:54] 2026-04-18 14:45:54,570 [wrapper] apfmon messages muted
[2026-04-18 16:45:54] 2026-04-18 14:45:54,573 [wrapper] ==== wrapper stdout END ====
[2026-04-18 16:45:54] 2026-04-18 14:45:54,580 [wrapper] ==== wrapper stderr END ====
[2026-04-18 16:45:54]  *** Error codes and diagnostics ***
[2026-04-18 16:45:54]     "exeErrorCode": 0,
[2026-04-18 16:45:54]     "pilotErrorCode": 0,
[2026-04-18 16:45:54]  *** Listing of results directory ***
[2026-04-18 16:45:54] total 460752
[2026-04-18 16:45:54] -rwx------. 1 boinc boinc     36322 Apr 18 08:15 runpilot2-wrapper.sh
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc    644190 Apr 18 08:20 pilot3.tar.gz
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc      5094 Apr 18 08:27 queuedata.json
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc       100 Apr 18 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 16:45:54] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 13:27 run_atlas
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc       105 Apr 18 13:27 job.xml
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc 278708411 Apr 18 13:27 EVNT.49539591._000113.pool.root.1
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 13:27 start_atlas.sh
[2026-04-18 16:45:54] drwxrwx--x. 2 boinc boinc        68 Apr 18 13:27 shared
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc    656938 Apr 18 13:27 input.tar.gz
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc      6307 Apr 18 13:27 init_data.xml
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc         0 Apr 18 13:27 boinc_lockfile
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc      2603 Apr 18 13:27 pandaJob.out
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc       415 Apr 18 13:34 workernode_map.json
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc    997957 Apr 18 13:34 agis_schedconf.cvmfs.json
[2026-04-18 16:45:54] drwx------. 5 boinc boinc      4096 Apr 18 13:34 pilot3
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc 186184572 Apr 18 16:44 HITS.49545114._020386.pool.root.1
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc       488 Apr 18 16:44 boinc_task_state.xml
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc        95 Apr 18 16:45 pilot_heartbeat.json
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc      1020 Apr 18 16:45 memory_monitor_summary.json
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc   1512404 Apr 18 16:45 agis_ddmendpoints.agis.ALL.json
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc    359322 Apr 18 16:45 log.49545114._020386.job.log.tgz.1
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc      6343 Apr 18 16:45 heartbeat_new.json
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc      6234 Apr 18 16:45 heartbeat.json
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc      8192 Apr 18 16:45 boinc_mmap_file
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc        28 Apr 18 16:45 wrapper_checkpoint.txt
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc      4880 Apr 18 16:45 pilotlog.txt
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc   1074789 Apr 18 16:45 log.49545114._020386.job.log.1
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc       357 Apr 18 16:45 output.list
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc       410 Apr 18 16:45 runtime_log
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc   1454080 Apr 18 16:45 result.tar.gz
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc      8454 Apr 18 16:45 runtime_log.err
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc       655 Apr 18 16:45 217e0ee5dd28.diag
[2026-04-18 16:45:54] -rw-r--r--. 1 boinc boinc     20616 Apr 18 16:45 stderr.txt
[2026-04-18 16:45:54] HITS file was successfully produced:
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc 186184572 Apr 18 16:44 shared/HITS.pool.root.1
[2026-04-18 16:45:54]  *** Contents of shared directory: ***
[2026-04-18 16:45:54] total 456084
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc 278708411 Apr 18 13:27 ATLAS.root_0
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 13:27 start_atlas.sh
[2026-04-18 16:45:54] -rw-r--r--. 2 boinc boinc    656938 Apr 18 13:27 input.tar.gz
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc 186184572 Apr 18 16:44 HITS.pool.root.1
[2026-04-18 16:45:54] -rw-------. 1 boinc boinc   1454080 Apr 18 16:45 result.tar.gz
16:45:56 (14448): run_atlas exited; CPU time 54177.486937
16:45:56 (14448): called boinc_finish(0)

</stderr_txt>
]]>

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