Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:49 (17880): wrapper (7.7.26015): starting
17:06:49 (17880): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 17:06:49] Arguments: --nthreads 8
[2026-04-18 17:06:49] Threads: 8
[2026-04-18 17:06:49] Checking for CVMFS
[2026-04-18 17:06:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 17:06:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 17:06:49] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 17:06:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 17:06:49] 2.11.2.0 20034 4200 93384 158587 1 208 15870062 25165824 956 130560 0 1219522 99.556 4116019 30787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 17:06:49] CVMFS is ok
[2026-04-18 17:06:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 17:06:49] Checking for apptainer binary...
[2026-04-18 17:06:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 17:06:49] Running /usr/bin/apptainer --version
[2026-04-18 17:06:49] apptainer version 1.3.2-1.el7
[2026-04-18 17:06:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 17:06:51] cg-vwn380.simple-grid.lan
[2026-04-18 17:06:51] apptainer works
[2026-04-18 17:06:51] Set ATHENA_PROC_NUMBER=8
[2026-04-18 17:06:51] Set ATHENA_CORE_NUMBER=8
[2026-04-18 17:06:51] Starting ATLAS job with PandaID=7096613677
[2026-04-18 17:06:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 21:06:54]  *** The last 200 lines of the pilot log: ***
[2026-04-18 21:06:54] 2026-04-18 19:05:52,696 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,696 | INFO     | log transfer has been attempted: DONE
[2026-04-18 21:06:54] 2026-04-18 19:05:52,696 | INFO     | job 7096613677 has finished - writing final server update
[2026-04-18 21:06:54] 2026-04-18 19:05:52,696 | INFO     | total number of processed events: 400 (read)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,699 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7096613677/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,699 | INFO     | extracted standard info from prmon json
[2026-04-18 21:06:54] 2026-04-18 19:05:52,699 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 21:06:54] 2026-04-18 19:05:52,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 21:06:54] 2026-04-18 19:05:52,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 21:06:54] 2026-04-18 19:05:52,705 | INFO     | fitting pss+swap vs Time
[2026-04-18 21:06:54] 2026-04-18 19:05:52,706 | INFO     | sum of square deviations: 3972995422.5
[2026-04-18 21:06:54] 2026-04-18 19:05:52,708 | INFO     | sum of deviations: 29479395549.499973
[2026-04-18 21:06:54] 2026-04-18 19:05:52,708 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,708 | INFO     | mean y: 2490665.311965812
[2026-04-18 21:06:54] 2026-04-18 19:05:52,708 | INFO     | intersect: 2490665.311965812
[2026-04-18 21:06:54] 2026-04-18 19:05:52,709 | INFO     | chi2: 2.398141250184018
[2026-04-18 21:06:54] 2026-04-18 19:05:52,709 | INFO     | sum of square deviations: 3723716330.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,711 | INFO     | sum of deviations: 44351331914.99998
[2026-04-18 21:06:54] 2026-04-18 19:05:52,712 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,712 | INFO     | mean y: 2499597.069868996
[2026-04-18 21:06:54] 2026-04-18 19:05:52,712 | INFO     | intersect: 2499597.069868996
[2026-04-18 21:06:54] 2026-04-18 19:05:52,712 | INFO     | chi2: 1.6182488243552604
[2026-04-18 21:06:54] 2026-04-18 19:05:52,712 | INFO     | current chi2=1.6182488243552604 (change=32.520704348374544 %)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,717 | INFO     | sum of square deviations: 3485088600.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,719 | INFO     | sum of deviations: 43259504443.99999
[2026-04-18 21:06:54] 2026-04-18 19:05:52,719 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,719 | INFO     | mean y: 2498899.223214286
[2026-04-18 21:06:54] 2026-04-18 19:05:52,720 | INFO     | intersect: 2498899.223214286
[2026-04-18 21:06:54] 2026-04-18 19:05:52,720 | INFO     | chi2: 1.6188043470468703
[2026-04-18 21:06:54] 2026-04-18 19:05:52,720 | INFO     | current chi2=1.6188043470468703 (change=-0.03432863248525367 %)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,720 | INFO     | right removable region: 223
[2026-04-18 21:06:54] 2026-04-18 19:05:52,721 | INFO     | sum of square deviations: 3723716330.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,723 | INFO     | sum of deviations: -9868993641.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,723 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,723 | INFO     | mean y: 2514529.3755458514
[2026-04-18 21:06:54] 2026-04-18 19:05:52,723 | INFO     | intersect: 2514529.3755458514
[2026-04-18 21:06:54] 2026-04-18 19:05:52,724 | INFO     | chi2: 0.8280487027768842
[2026-04-18 21:06:54] 2026-04-18 19:05:52,724 | INFO     | current chi2=0.8280487027768842 (change=65.47122890641471 %)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,724 | INFO     | sum of square deviations: 3485088600.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,726 | INFO     | sum of deviations: -15770692767.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,727 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,727 | INFO     | mean y: 2518290.5535714286
[2026-04-18 21:06:54] 2026-04-18 19:05:52,727 | INFO     | intersect: 2518290.5535714286
[2026-04-18 21:06:54] 2026-04-18 19:05:52,727 | INFO     | chi2: 0.8012960601118841
[2026-04-18 21:06:54] 2026-04-18 19:05:52,728 | INFO     | current chi2=0.8012960601118841 (change=3.2308054556796453 %)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,728 | INFO     | left removable region: 10
[2026-04-18 21:06:54] 2026-04-18 19:05:52,728 | INFO     | sum of square deviations: 2996454322.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,730 | INFO     | sum of deviations: -683605649.9999998
[2026-04-18 21:06:54] 2026-04-18 19:05:52,730 | INFO     | mean x (centered): 0.0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,730 | INFO     | mean y: 2528187.295774648
[2026-04-18 21:06:54] 2026-04-18 19:05:52,730 | INFO     | intersect: 2528187.295774648
[2026-04-18 21:06:54] 2026-04-18 19:05:52,731 | INFO     | chi2: 0.0026273634949177055
[2026-04-18 21:06:54] 2026-04-18 19:05:52,741 | INFO     | current memory leak: -0.23 B/s (using 213 data points, chi2=0.00)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,742 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,742 | INFO     | ..............................
[2026-04-18 21:06:54] 2026-04-18 19:05:52,742 | INFO     | . Timing measurements:
[2026-04-18 21:06:54] 2026-04-18 19:05:52,742 | INFO     | . get job = 0 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . initial setup = 8 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . payload setup = 17 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . stage-in = 0 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . payload execution = 14277 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . stage-out = 1 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | . log creation = 0 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,743 | INFO     | ..............................
[2026-04-18 21:06:54] 2026-04-18 19:05:52,887 | INFO     | 
[2026-04-18 21:06:54] 2026-04-18 19:05:52,887 | INFO     | job summary report
[2026-04-18 21:06:54] 2026-04-18 19:05:52,887 | INFO     | --------------------------------------------------
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | PanDA job id: 7096613677
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | task id: 49545114
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | errors: (none)
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | pilot state: finished 
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | transexitcode: 0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | exeerrorcode: 0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | exeerrordiag: 
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | exitcode: 0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,888 | INFO     | exitmsg: OK
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | cpuconsumptiontime: 57610 s
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | nevents: 400
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | neventsw: 0
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | pid: 26065
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | pgrp: 26065
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | corecount: 8
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | event service: False
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | sizes: {0: 2281852, 1: 2283426, 11: 2283454, 14299: 2314202, 14301: 2323200, 14302: 2323284, 14304: 2323606}
[2026-04-18 21:06:54] 2026-04-18 19:05:52,889 | INFO     | --------------------------------------------------
[2026-04-18 21:06:54] 2026-04-18 19:05:52,890 | INFO     | 
[2026-04-18 21:06:54] 2026-04-18 19:05:52,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | job 7096613677 has completed (purged errors)
[2026-04-18 21:06:54] 2026-04-18 19:05:53,431 | INFO     | overall cleanup function is called
[2026-04-18 21:06:54] 2026-04-18 19:05:54,440 | INFO     | --- collectZombieJob: --- 10, [26065]
[2026-04-18 21:06:54] 2026-04-18 19:05:54,440 | INFO     | zombie collector waiting for pid 26065
[2026-04-18 21:06:54] 2026-04-18 19:05:54,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 21:06:54] 2026-04-18 19:05:54,441 | INFO     | collected zombie processes
[2026-04-18 21:06:54] 2026-04-18 19:05:54,441 | INFO     | will attempt to kill all subprocesses of pid=26065
[2026-04-18 21:06:54] 2026-04-18 19:05:54,527 | INFO     | process IDs to be killed: [26065] (in reverse order)
[2026-04-18 21:06:54] 2026-04-18 19:05:55,437 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 21:06:54] 2026-04-18 19:05:55,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 21:06:54] 2026-04-18 19:05:55,439 | INFO     | did not find any defunct processes belonging to 26065
[2026-04-18 21:06:54] 2026-04-18 19:05:55,442 | INFO     | did not find any defunct processes belonging to 26065
[2026-04-18 21:06:54] 2026-04-18 19:05:55,442 | INFO     | Ready for new job
[2026-04-18 21:06:54] 2026-04-18 19:05:55,444 | INFO     | **************************************
[2026-04-18 21:06:54] 2026-04-18 19:05:55,444 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 21:06:54] 2026-04-18 19:05:55,444 | INFO     | **************************************
[2026-04-18 21:06:54] 2026-04-18 19:05:55,444 | INFO     | 
[2026-04-18 21:06:54] 2026-04-18 19:05:55,445 | INFO     | pilot is running in a VM
[2026-04-18 21:06:54] 2026-04-18 19:05:55,445 | INFO     | architecture information:
[2026-04-18 21:06:54] 2026-04-18 19:05:55,445 | INFO     | executing command: cat /etc/os-release
[2026-04-18 21:06:54] 2026-04-18 19:05:55,704 | INFO     | cat /etc/os-release:
[2026-04-18 21:06:54] NAME="CentOS Linux"
[2026-04-18 21:06:54] VERSION="7 (Core)"
[2026-04-18 21:06:54] ID="centos"
[2026-04-18 21:06:54] ID_LIKE="rhel fedora"
[2026-04-18 21:06:54] VERSION_ID="7"
[2026-04-18 21:06:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 21:06:54] ANSI_COLOR="0;31"
[2026-04-18 21:06:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 21:06:54] HOME_URL="https://www.centos.org/"
[2026-04-18 21:06:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 21:06:54] 
[2026-04-18 21:06:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 21:06:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 21:06:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 21:06:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 21:06:54] 
[2026-04-18 21:06:54] 2026-04-18 19:05:55,705 | INFO     | **************************************
[2026-04-18 21:06:54] 2026-04-18 19:05:56,208 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-18 21:06:54] 2026-04-18 19:05:56,419 | INFO     | sufficient remaining disk space (494437138432 B)
[2026-04-18 21:06:54] 2026-04-18 19:05:56,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 21:06:54] 2026-04-18 19:05:56,419 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 21:06:54] 2026-04-18 19:05:56,419 | INFO     | update_server=False
[2026-04-18 21:06:54] 2026-04-18 19:05:56,419 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 21:06:54] 2026-04-18 19:05:56,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 21:06:54] 2026-04-18 19:05:56,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 21:06:54] 2026-04-18 19:05:56,422 | INFO     | aborting loop
[2026-04-18 21:06:54] 2026-04-18 19:05:56,501 | INFO     | all job control threads have been joined
[2026-04-18 21:06:54] 2026-04-18 19:05:56,601 | INFO     | all data control threads have been joined
[2026-04-18 21:06:54] 2026-04-18 19:05:56,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 21:06:54] 2026-04-18 19:05:56,953 | INFO     | all payload control threads have been joined
[2026-04-18 21:06:54] 2026-04-18 19:05:57,425 | INFO     | [job] retrieve thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,428 | INFO     | [job] job monitor thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,433 | INFO     | [payload] validate_post thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,507 | INFO     | [job] control thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,607 | INFO     | [data] control thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,631 | INFO     | [payload] failed_post thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:57,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 21:06:54] 2026-04-18 19:05:57,959 | INFO     | [payload] control thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,207 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,317 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,411 | INFO     | [job] validate thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,427 | INFO     | [data] copytool_out thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,730 | INFO     | [data] copytool_in thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,819 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:05:58,905 | INFO     | [job] queue monitor thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:06:00,640 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:06:06,535 | INFO     | job.realtimelogging is not enabled
[2026-04-18 21:06:54] 2026-04-18 19:06:07,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 21:06:54] 2026-04-18 19:06:24,938 | INFO     | PID=21655 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 21:06:54] 2026-04-18 19:06:24,939 | INFO     | .. there are 2 such processes running
[2026-04-18 21:06:54] 2026-04-18 19:06:24,940 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 21:06:54] 2026-04-18 19:06:24,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 21:06:54] 2026-04-18 19:06:24,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 21:06:54] 2026-04-18 19:06:41,781 | INFO     | [monitor] cgroup control has ended
[2026-04-18 21:06:54] 2026-04-18 19:06:42,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771476158272)>', '<ExcThread(monitor, started 139771045209856)>']
[2026-04-18 21:06:54] 2026-04-18 19:06:43,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 21:06:54] 2026-04-18 19:06:43,047 | INFO     | [monitor] control thread has ended
[2026-04-18 21:06:54] 2026-04-18 19:06:48,019 | INFO     | all workflow threads have been joined
[2026-04-18 21:06:54] 2026-04-18 19:06:48,019 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 21:06:54] 2026-04-18 19:06:48,020 | INFO     | traces error code: 0
[2026-04-18 21:06:54] 2026-04-18 19:06:48,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 21:06:54] 2026-04-18 19:06:48,497 [wrapper] ==== pilot stdout END ====
[2026-04-18 21:06:54] 2026-04-18 19:06:48,601 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 21:06:54] 2026-04-18 19:06:48,717 [wrapper] pilotpid: 21655
[2026-04-18 21:06:54] 2026-04-18 19:06:48,794 [wrapper] Pilot exit status: 0
[2026-04-18 21:06:54] 2026-04-18 19:06:49,018 [wrapper] pandaids: 7096613677
[2026-04-18 21:06:54] 2026-04-18 19:06:50,397 [wrapper] cleanup supervisor_pilot 32106 21656
[2026-04-18 21:06:54] 2026-04-18 19:06:50,515 [wrapper] Test setup, not cleaning
[2026-04-18 21:06:54] 2026-04-18 19:06:50,621 [wrapper] apfmon messages muted
[2026-04-18 21:06:54] 2026-04-18 19:06:50,723 [wrapper] ==== wrapper stdout END ====
[2026-04-18 21:06:54] 2026-04-18 19:06:50,840 [wrapper] ==== wrapper stderr END ====
[2026-04-18 21:06:54]  *** Error codes and diagnostics ***
[2026-04-18 21:06:54]     "exeErrorCode": 0,
[2026-04-18 21:06:54]     "pilotErrorCode": 0,
[2026-04-18 21:06:54]  *** Listing of results directory ***
[2026-04-18 21:06:54] total 461976
[2026-04-18 21:06:54] -rwx------. 1 boinc boinc     36322 Apr 18 08:14 runpilot2-wrapper.sh
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc    644190 Apr 18 08:20 pilot3.tar.gz
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc      5094 Apr 18 08:27 queuedata.json
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc       100 Apr 18 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 21:06:54] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 17:06 run_atlas
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc       105 Apr 18 17:06 job.xml
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc 279479421 Apr 18 17:06 EVNT.49539591._000186.pool.root.1
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc    656934 Apr 18 17:06 input.tar.gz
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc      6306 Apr 18 17:06 init_data.xml
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 17:06 start_atlas.sh
[2026-04-18 21:06:54] drwxrwx--x. 2 boinc boinc        68 Apr 18 17:06 shared
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc         0 Apr 18 17:06 boinc_lockfile
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc      2603 Apr 18 17:06 pandaJob.out
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc    997676 Apr 18 17:07 agis_schedconf.cvmfs.json
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc       415 Apr 18 17:07 workernode_map.json
[2026-04-18 21:06:54] drwx------. 5 boinc boinc      4096 Apr 18 17:07 pilot3
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc 186112419 Apr 18 21:04 HITS.49545114._020620.pool.root.1
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc       488 Apr 18 21:04 boinc_task_state.xml
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc      1018 Apr 18 21:05 memory_monitor_summary.json
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc   1512404 Apr 18 21:05 agis_ddmendpoints.agis.ALL.json
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc    391198 Apr 18 21:05 log.49545114._020620.job.log.tgz.1
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc      6335 Apr 18 21:05 heartbeat_new.json
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc      6226 Apr 18 21:05 heartbeat.json
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc        95 Apr 18 21:06 pilot_heartbeat.json
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc      8192 Apr 18 21:06 boinc_mmap_file
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc        28 Apr 18 21:06 wrapper_checkpoint.txt
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc      4951 Apr 18 21:06 pilotlog.txt
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc   1319102 Apr 18 21:06 log.49545114._020620.job.log.1
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc       357 Apr 18 21:06 output.list
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc       410 Apr 18 21:06 runtime_log
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc   1730560 Apr 18 21:06 result.tar.gz
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc      8438 Apr 18 21:06 runtime_log.err
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc       655 Apr 18 21:06 213c581c0c2a.diag
[2026-04-18 21:06:54] -rw-r--r--. 1 boinc boinc     20618 Apr 18 21:06 stderr.txt
[2026-04-18 21:06:54] HITS file was successfully produced:
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc 186112419 Apr 18 21:04 shared/HITS.pool.root.1
[2026-04-18 21:06:54]  *** Contents of shared directory: ***
[2026-04-18 21:06:54] total 457036
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc 279479421 Apr 18 17:06 ATLAS.root_0
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc    656934 Apr 18 17:06 input.tar.gz
[2026-04-18 21:06:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 17:06 start_atlas.sh
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc 186112419 Apr 18 21:04 HITS.pool.root.1
[2026-04-18 21:06:54] -rw-------. 1 boinc boinc   1730560 Apr 18 21:06 result.tar.gz
21:06:55 (17880): run_atlas exited; CPU time 57742.280006
21:06:55 (17880): called boinc_finish(0)

</stderr_txt>
]]>

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