Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:41:51 (25153): wrapper (7.7.26015): starting
08:41:51 (25153): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 08:41:51] Arguments: --nthreads 8
[2026-04-18 08:41:51] Threads: 8
[2026-04-18 08:41:51] Checking for CVMFS
[2026-04-18 08:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 08:41:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 08:41:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 08:41:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 08:41:54] 2.11.2.0 19479 3682 82712 158575 2 13 15664641 25165824 1060 130560 0 1725633 99.922 3579711 22972 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 08:41:54] CVMFS is ok
[2026-04-18 08:41:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 08:41:54] Checking for apptainer binary...
[2026-04-18 08:41:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 08:41:54] Running /usr/bin/apptainer --version
[2026-04-18 08:41:55] apptainer version 1.3.2-1.el7
[2026-04-18 08:41:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 08:42:12] cg-vwn451.simple-grid.lan
[2026-04-18 08:42:12] apptainer works
[2026-04-18 08:42:12] Set ATHENA_PROC_NUMBER=8
[2026-04-18 08:42:12] Set ATHENA_CORE_NUMBER=8
[2026-04-18 08:42:13] Starting ATLAS job with PandaID=7102797552
[2026-04-18 08:42:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 20:48:31]  *** The last 200 lines of the pilot log: ***
[2026-04-18 20:48:31] 2026-04-18 18:47:23,795 | INFO     | this job has now completed (state=finished)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,795 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,795 | INFO     | log transfer has been attempted: DONE
[2026-04-18 20:48:31] 2026-04-18 18:47:23,795 | INFO     | job 7102797552 has finished - writing final server update
[2026-04-18 20:48:31] 2026-04-18 18:47:23,796 | INFO     | total number of processed events: 400 (read)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,798 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7102797552/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,799 | INFO     | extracted standard info from prmon json
[2026-04-18 20:48:31] 2026-04-18 18:47:23,799 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 20:48:31] 2026-04-18 18:47:23,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 20:48:31] 2026-04-18 18:47:23,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 20:48:31] 2026-04-18 18:47:23,814 | INFO     | fitting pss+swap vs Time
[2026-04-18 20:48:31] 2026-04-18 18:47:23,815 | INFO     | sum of square deviations: 107272617835.5
[2026-04-18 20:48:31] 2026-04-18 18:47:23,831 | INFO     | sum of deviations: 535257191294.0002
[2026-04-18 20:48:31] 2026-04-18 18:47:23,831 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,832 | INFO     | mean y: 2485176.655270655
[2026-04-18 20:48:31] 2026-04-18 18:47:23,832 | INFO     | intersect: 2485176.655270655
[2026-04-18 20:48:31] 2026-04-18 18:47:23,833 | INFO     | chi2: 8.747458456822297
[2026-04-18 20:48:31] 2026-04-18 18:47:23,834 | INFO     | sum of square deviations: 104996751908.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,857 | INFO     | sum of deviations: 577764996825.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,857 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,858 | INFO     | mean y: 2488006.8278335724
[2026-04-18 20:48:31] 2026-04-18 18:47:23,858 | INFO     | intersect: 2488006.8278335724
[2026-04-18 20:48:31] 2026-04-18 18:47:23,859 | INFO     | chi2: 8.00035140577984
[2026-04-18 20:48:31] 2026-04-18 18:47:23,859 | INFO     | current chi2=8.00035140577984 (change=8.540847089816987 %)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,859 | INFO     | right removable region: 696
[2026-04-18 20:48:31] 2026-04-18 18:47:23,860 | INFO     | sum of square deviations: 104996751908.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,881 | INFO     | sum of deviations: 274512651583.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,881 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,881 | INFO     | mean y: 2502647.024390244
[2026-04-18 20:48:31] 2026-04-18 18:47:23,882 | INFO     | intersect: 2502647.024390244
[2026-04-18 20:48:31] 2026-04-18 18:47:23,883 | INFO     | chi2: 3.687058115977302
[2026-04-18 20:48:31] 2026-04-18 18:47:23,883 | INFO     | current chi2=3.687058115977302 (change=57.84994996916275 %)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,884 | INFO     | sum of square deviations: 102753305193.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,904 | INFO     | sum of deviations: 78992336130.00002
[2026-04-18 20:48:31] 2026-04-18 18:47:23,904 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,904 | INFO     | mean y: 2515931.907514451
[2026-04-18 20:48:31] 2026-04-18 18:47:23,905 | INFO     | intersect: 2515931.907514451
[2026-04-18 20:48:31] 2026-04-18 18:47:23,906 | INFO     | chi2: 0.9292754097315808
[2026-04-18 20:48:31] 2026-04-18 18:47:23,906 | INFO     | current chi2=0.9292754097315808 (change=74.79629068756178 %)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,907 | INFO     | sum of square deviations: 100542045128.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,932 | INFO     | sum of deviations: 43483524747.99999
[2026-04-18 20:48:31] 2026-04-18 18:47:23,932 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,932 | INFO     | mean y: 2518373.8675400293
[2026-04-18 20:48:31] 2026-04-18 18:47:23,932 | INFO     | intersect: 2518373.8675400293
[2026-04-18 20:48:31] 2026-04-18 18:47:23,934 | INFO     | chi2: 0.800235254908178
[2026-04-18 20:48:31] 2026-04-18 18:47:23,934 | INFO     | current chi2=0.800235254908178 (change=13.886104536078896 %)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,934 | INFO     | left removable region: 15
[2026-04-18 20:48:31] 2026-04-18 18:47:23,935 | INFO     | sum of square deviations: 97930691980.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,956 | INFO     | sum of deviations: 88280882624.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,956 | INFO     | mean x (centered): 0.0
[2026-04-18 20:48:31] 2026-04-18 18:47:23,956 | INFO     | mean y: 2521489.48164464
[2026-04-18 20:48:31] 2026-04-18 18:47:23,956 | INFO     | intersect: 2521489.48164464
[2026-04-18 20:48:31] 2026-04-18 18:47:23,958 | INFO     | chi2: 0.020579726361784005
[2026-04-18 20:48:31] 2026-04-18 18:47:23,958 | INFO     | current memory leak: 0.90 B/s (using 681 data points, chi2=0.02)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,959 | INFO     | could have reported an average CPU frequency of 1999 MHz (27 samples)
[2026-04-18 20:48:31] 2026-04-18 18:47:23,959 | INFO     | ..............................
[2026-04-18 20:48:31] 2026-04-18 18:47:23,959 | INFO     | . Timing measurements:
[2026-04-18 20:48:31] 2026-04-18 18:47:23,959 | INFO     | . get job = 0 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,959 | INFO     | . initial setup = 113 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | . payload setup = 214 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | . stage-in = 0 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | . payload execution = 42917 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | . stage-out = 5 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | . log creation = 1 s
[2026-04-18 20:48:31] 2026-04-18 18:47:23,960 | INFO     | ..............................
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | 
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | job summary report
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | --------------------------------------------------
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | PanDA job id: 7102797552
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | task id: 49515157
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | errors: (none)
[2026-04-18 20:48:31] 2026-04-18 18:47:24,136 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | pilot state: finished 
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | transexitcode: 0
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | exeerrorcode: 0
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | exeerrordiag: 
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | exitcode: 0
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | exitmsg: OK
[2026-04-18 20:48:31] 2026-04-18 18:47:24,137 | INFO     | cpuconsumptiontime: 179990 s
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | nevents: 400
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | neventsw: 0
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | pid: 1154
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | pgrp: 1154
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | corecount: 8
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | event service: False
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | sizes: {0: 2281575, 1: 2281976, 2: 2283404, 12: 2283432, 43135: 2327572, 43143: 2336572, 43144: 2336756, 43147: 2336950}
[2026-04-18 20:48:31] 2026-04-18 18:47:24,138 | INFO     | --------------------------------------------------
[2026-04-18 20:48:31] 2026-04-18 18:47:24,139 | INFO     | 
[2026-04-18 20:48:31] 2026-04-18 18:47:24,139 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-04-18 20:48:31] 2026-04-18 18:47:24,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 20:48:31] 2026-04-18 18:47:24,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 20:48:31] 2026-04-18 18:47:24,517 | INFO     | job 7102797552 has completed (purged errors)
[2026-04-18 20:48:31] 2026-04-18 18:47:24,517 | INFO     | overall cleanup function is called
[2026-04-18 20:48:31] 2026-04-18 18:47:25,526 | INFO     | --- collectZombieJob: --- 10, [1154]
[2026-04-18 20:48:31] 2026-04-18 18:47:25,526 | INFO     | zombie collector waiting for pid 1154
[2026-04-18 20:48:31] 2026-04-18 18:47:25,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 20:48:31] 2026-04-18 18:47:25,527 | INFO     | collected zombie processes
[2026-04-18 20:48:31] 2026-04-18 18:47:25,527 | INFO     | will attempt to kill all subprocesses of pid=1154
[2026-04-18 20:48:31] 2026-04-18 18:47:25,630 | INFO     | process IDs to be killed: [1154] (in reverse order)
[2026-04-18 20:48:31] 2026-04-18 18:47:26,611 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 20:48:31] 2026-04-18 18:47:26,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 20:48:31] 2026-04-18 18:47:26,613 | INFO     | did not find any defunct processes belonging to 1154
[2026-04-18 20:48:31] 2026-04-18 18:47:26,615 | INFO     | did not find any defunct processes belonging to 1154
[2026-04-18 20:48:31] 2026-04-18 18:47:26,616 | INFO     | Ready for new job
[2026-04-18 20:48:31] 2026-04-18 18:47:26,619 | INFO     | **************************************
[2026-04-18 20:48:31] 2026-04-18 18:47:26,619 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 20:48:31] 2026-04-18 18:47:26,619 | INFO     | **************************************
[2026-04-18 20:48:31] 2026-04-18 18:47:26,619 | INFO     | 
[2026-04-18 20:48:31] 2026-04-18 18:47:26,620 | INFO     | pilot is running in a VM
[2026-04-18 20:48:31] 2026-04-18 18:47:26,620 | INFO     | architecture information:
[2026-04-18 20:48:31] 2026-04-18 18:47:26,623 | INFO     | executing command: cat /etc/os-release
[2026-04-18 20:48:31] 2026-04-18 18:47:26,977 | INFO     | cat /etc/os-release:
[2026-04-18 20:48:31] NAME="CentOS Linux"
[2026-04-18 20:48:31] VERSION="7 (Core)"
[2026-04-18 20:48:31] ID="centos"
[2026-04-18 20:48:31] ID_LIKE="rhel fedora"
[2026-04-18 20:48:31] VERSION_ID="7"
[2026-04-18 20:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 20:48:31] ANSI_COLOR="0;31"
[2026-04-18 20:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 20:48:31] HOME_URL="https://www.centos.org/"
[2026-04-18 20:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 20:48:31] 
[2026-04-18 20:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 20:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 20:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 20:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 20:48:31] 
[2026-04-18 20:48:31] 2026-04-18 18:47:26,978 | INFO     | **************************************
[2026-04-18 20:48:31] 2026-04-18 18:47:27,481 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-04-18 20:48:31] 2026-04-18 18:47:27,763 | INFO     | sufficient remaining disk space (497576574976 B)
[2026-04-18 20:48:31] 2026-04-18 18:47:27,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 20:48:31] 2026-04-18 18:47:27,763 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 20:48:31] 2026-04-18 18:47:27,763 | INFO     | update_server=False
[2026-04-18 20:48:31] 2026-04-18 18:47:27,763 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 20:48:31] 2026-04-18 18:47:27,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:48:31] 2026-04-18 18:47:27,764 | INFO     | aborting loop
[2026-04-18 20:48:31] 2026-04-18 18:47:27,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 20:48:31] 2026-04-18 18:47:27,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 20:48:31] 2026-04-18 18:47:27,844 | INFO     | all data control threads have been joined
[2026-04-18 20:48:31] 2026-04-18 18:47:28,212 | INFO     | all job control threads have been joined
[2026-04-18 20:48:31] 2026-04-18 18:47:28,770 | INFO     | [job] job monitor thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:28,773 | INFO     | [job] retrieve thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:28,850 | INFO     | [data] control thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:28,912 | INFO     | all payload control threads have been joined
[2026-04-18 20:48:31] 2026-04-18 18:47:29,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 20:48:31] 2026-04-18 18:47:29,218 | INFO     | [job] control thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,411 | INFO     | [payload] validate_post thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,613 | INFO     | [payload] failed_post thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,688 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,734 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,751 | INFO     | [job] validate thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,773 | INFO     | [data] copytool_out thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,891 | INFO     | [data] copytool_in thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:29,918 | INFO     | [payload] control thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:30,024 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:30,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:30,159 | INFO     | [job] queue monitor thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:31,774 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 20:48:31] 2026-04-18 18:47:56,145 | INFO     | PID=29116 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 20:48:31] 2026-04-18 18:47:56,146 | INFO     | .. there are 2 such processes running
[2026-04-18 20:48:31] 2026-04-18 18:47:56,147 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 20:48:31] 2026-04-18 18:47:56,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 20:48:31] 2026-04-18 18:47:56,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 20:48:31] 2026-04-18 18:48:19,426 | INFO     | [monitor] cgroup control has ended
[2026-04-18 20:48:31] 2026-04-18 18:48:21,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239861397312)>', '<ExcThread(monitor, started 140239557334784)>']
[2026-04-18 20:48:31] 2026-04-18 18:48:22,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 20:48:31] 2026-04-18 18:48:22,303 | INFO     | [monitor] control thread has ended
[2026-04-18 20:48:31] 2026-04-18 18:48:26,331 | INFO     | all workflow threads have been joined
[2026-04-18 20:48:31] 2026-04-18 18:48:26,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 20:48:31] 2026-04-18 18:48:26,331 | INFO     | traces error code: 0
[2026-04-18 20:48:31] 2026-04-18 18:48:26,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 20:48:31] 2026-04-18 18:48:26,558 [wrapper] ==== pilot stdout END ====
[2026-04-18 20:48:31] 2026-04-18 18:48:26,609 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 20:48:31] 2026-04-18 18:48:26,697 [wrapper] pilotpid: 29116
[2026-04-18 20:48:31] 2026-04-18 18:48:26,801 [wrapper] Pilot exit status: 0
[2026-04-18 20:48:31] 2026-04-18 18:48:27,275 [wrapper] pandaids: 7102797552
[2026-04-18 20:48:31] 2026-04-18 18:48:28,356 [wrapper] cleanup supervisor_pilot 30648 29117
[2026-04-18 20:48:31] 2026-04-18 18:48:28,431 [wrapper] Test setup, not cleaning
[2026-04-18 20:48:31] 2026-04-18 18:48:28,494 [wrapper] apfmon messages muted
[2026-04-18 20:48:31] 2026-04-18 18:48:28,580 [wrapper] ==== wrapper stdout END ====
[2026-04-18 20:48:31] 2026-04-18 18:48:28,675 [wrapper] ==== wrapper stderr END ====
[2026-04-18 20:48:31]  *** Error codes and diagnostics ***
[2026-04-18 20:48:31]     "exeErrorCode": 0,
[2026-04-18 20:48:31]     "pilotErrorCode": 0,
[2026-04-18 20:48:31]  *** Listing of results directory ***
[2026-04-18 20:48:31] total 495640
[2026-04-18 20:48:31] -rwx------. 1 boinc boinc     36322 Apr 18 08:13 runpilot2-wrapper.sh
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc    644190 Apr 18 08:20 pilot3.tar.gz
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc      5094 Apr 18 08:22 queuedata.json
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc       100 Apr 18 08:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 20:48:31] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 08:41 run_atlas
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc       105 Apr 18 08:41 job.xml
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc      6307 Apr 18 08:41 init_data.xml
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc 241419399 Apr 18 08:41 EVNT.49515154._000007.pool.root.1
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:41 start_atlas.sh
[2026-04-18 20:48:31] drwxrwx--x. 2 boinc boinc        68 Apr 18 08:41 shared
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc    656932 Apr 18 08:41 input.tar.gz
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc         0 Apr 18 08:41 boinc_lockfile
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc      2604 Apr 18 08:42 pandaJob.out
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc       415 Apr 18 08:48 workernode_map.json
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc    997901 Apr 18 08:48 agis_schedconf.cvmfs.json
[2026-04-18 20:48:31] drwx------. 5 boinc boinc      4096 Apr 18 08:48 pilot3
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc 252863758 Apr 18 20:45 HITS.49515157._000894.pool.root.1
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc       490 Apr 18 20:46 boinc_task_state.xml
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc      1016 Apr 18 20:47 memory_monitor_summary.json
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc   1512404 Apr 18 20:47 agis_ddmendpoints.agis.ALL.json
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc    663820 Apr 18 20:47 log.49515157._000894.job.log.tgz.1
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc      6336 Apr 18 20:47 heartbeat_new.json
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc      6227 Apr 18 20:47 heartbeat.json
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc        95 Apr 18 20:47 pilot_heartbeat.json
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc      8192 Apr 18 20:47 boinc_mmap_file
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc        29 Apr 18 20:47 wrapper_checkpoint.txt
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc      4880 Apr 18 20:48 pilotlog.txt
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc   3937970 Apr 18 20:48 log.49515157._000894.job.log.1
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc       357 Apr 18 20:48 output.list
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc       410 Apr 18 20:48 runtime_log
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc   4618240 Apr 18 20:48 result.tar.gz
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc      8454 Apr 18 20:48 runtime_log.err
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc       658 Apr 18 20:48 2108b6d760b6.diag
[2026-04-18 20:48:31] -rw-r--r--. 1 boinc boinc     20629 Apr 18 20:48 stderr.txt
[2026-04-18 20:48:31] HITS file was successfully produced:
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc 252863758 Apr 18 20:45 shared/HITS.pool.root.1
[2026-04-18 20:48:31]  *** Contents of shared directory: ***
[2026-04-18 20:48:31] total 487876
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc 241419399 Apr 18 08:41 ATLAS.root_0
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:41 start_atlas.sh
[2026-04-18 20:48:31] -rw-r--r--. 2 boinc boinc    656932 Apr 18 08:41 input.tar.gz
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc 252863758 Apr 18 20:45 HITS.pool.root.1
[2026-04-18 20:48:31] -rw-------. 1 boinc boinc   4618240 Apr 18 20:48 result.tar.gz
20:48:33 (25153): run_atlas exited; CPU time 180484.844958
20:48:33 (25153): called boinc_finish(0)

</stderr_txt>
]]>

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