Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:37:15 (5783): wrapper (7.7.26015): starting
08:37:15 (5783): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 08:37:15] Arguments: --nthreads 8
[2026-04-18 08:37:15] Threads: 8
[2026-04-18 08:37:15] Checking for CVMFS
[2026-04-18 08:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 08:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 08:37:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 08:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 08:37:21] 2.11.2.0 7577 3711 78436 158575 2 53 23093646 25165825 885 130560 0 1130779 99.770 3835384 25952 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 08:37:21] CVMFS is ok
[2026-04-18 08:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 08:37:21] Checking for apptainer binary...
[2026-04-18 08:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 08:37:21] Running /usr/bin/apptainer --version
[2026-04-18 08:37:21] apptainer version 1.3.2-1.el7
[2026-04-18 08:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 08:37:36] cg-vwn483.simple-grid.lan
[2026-04-18 08:37:36] apptainer works
[2026-04-18 08:37:36] Set ATHENA_PROC_NUMBER=8
[2026-04-18 08:37:36] Set ATHENA_CORE_NUMBER=8
[2026-04-18 08:37:36] Starting ATLAS job with PandaID=7102796330
[2026-04-18 08:37:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 19:29:33]  *** The last 200 lines of the pilot log: ***
[2026-04-18 19:29:33] 2026-04-18 17:28:55,683 | INFO     | extracted standard info from prmon json
[2026-04-18 19:29:33] 2026-04-18 17:28:55,683 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 19:29:33] 2026-04-18 17:28:55,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 19:29:33] 2026-04-18 17:28:55,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 19:29:33] 2026-04-18 17:28:55,695 | INFO     | fitting pss+swap vs Time
[2026-04-18 19:29:33] 2026-04-18 17:28:55,696 | INFO     | sum of square deviations: 76799118584.99832
[2026-04-18 19:29:33] 2026-04-18 17:28:55,708 | INFO     | sum of deviations: 398433837568.84155
[2026-04-18 19:29:33] 2026-04-18 17:28:55,708 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,708 | INFO     | mean y: 2484131.657643312
[2026-04-18 19:29:33] 2026-04-18 17:28:55,709 | INFO     | intersect: 2484131.657643312
[2026-04-18 19:29:33] 2026-04-18 17:28:55,710 | INFO     | chi2: 7.762468503322304
[2026-04-18 19:29:33] 2026-04-18 17:28:55,711 | INFO     | sum of square deviations: 74979308024.99854
[2026-04-18 19:29:33] 2026-04-18 17:28:55,723 | INFO     | sum of deviations: 438216065208.9452
[2026-04-18 19:29:33] 2026-04-18 17:28:55,723 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,723 | INFO     | mean y: 2487442.054574639
[2026-04-18 19:29:33] 2026-04-18 17:28:55,723 | INFO     | intersect: 2487442.054574639
[2026-04-18 19:29:33] 2026-04-18 17:28:55,724 | INFO     | chi2: 6.971944427801834
[2026-04-18 19:29:33] 2026-04-18 17:28:55,724 | INFO     | current chi2=6.971944427801834 (change=10.183926352578814 %)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,725 | INFO     | right removable region: 622
[2026-04-18 19:29:33] 2026-04-18 17:28:55,725 | INFO     | sum of square deviations: 74979307414.99854
[2026-04-18 19:29:33] 2026-04-18 17:28:55,737 | INFO     | sum of deviations: 168716098980.46744
[2026-04-18 19:29:33] 2026-04-18 17:28:55,737 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,737 | INFO     | mean y: 2503378.532905297
[2026-04-18 19:29:33] 2026-04-18 17:28:55,738 | INFO     | intersect: 2503378.532905297
[2026-04-18 19:29:33] 2026-04-18 17:28:55,739 | INFO     | chi2: 2.8620981825869296
[2026-04-18 19:29:33] 2026-04-18 17:28:55,739 | INFO     | current chi2=2.8620981825869296 (change=63.12902034498481 %)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,740 | INFO     | sum of square deviations: 73188473532.49825
[2026-04-18 19:29:33] 2026-04-18 17:28:55,752 | INFO     | sum of deviations: 29670996696.294548
[2026-04-18 19:29:33] 2026-04-18 17:28:55,752 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,752 | INFO     | mean y: 2515200.2055016183
[2026-04-18 19:29:33] 2026-04-18 17:28:55,752 | INFO     | intersect: 2515200.2055016183
[2026-04-18 19:29:33] 2026-04-18 17:28:55,753 | INFO     | chi2: 0.9173029562615398
[2026-04-18 19:29:33] 2026-04-18 17:28:55,753 | INFO     | current chi2=0.9173029562615398 (change=67.94998292363162 %)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,754 | INFO     | sum of square deviations: 71426384374.9982
[2026-04-18 19:29:33] 2026-04-18 17:28:55,766 | INFO     | sum of deviations: 15800149835.856499
[2026-04-18 19:29:33] 2026-04-18 17:28:55,766 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,766 | INFO     | mean y: 2516398.1435562805
[2026-04-18 19:29:33] 2026-04-18 17:28:55,766 | INFO     | intersect: 2516398.1435562805
[2026-04-18 19:29:33] 2026-04-18 17:28:55,767 | INFO     | chi2: 0.8957831186285121
[2026-04-18 19:29:33] 2026-04-18 17:28:55,767 | INFO     | current chi2=0.8957831186285121 (change=2.345990219058225 %)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,768 | INFO     | left removable region: 15
[2026-04-18 19:29:33] 2026-04-18 17:28:55,769 | INFO     | sum of square deviations: 69349493706.99815
[2026-04-18 19:29:33] 2026-04-18 17:28:55,780 | INFO     | sum of deviations: 57474879849.45798
[2026-04-18 19:29:33] 2026-04-18 17:28:55,780 | INFO     | mean x (centered): 0.0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,780 | INFO     | mean y: 2520039.5420098845
[2026-04-18 19:29:33] 2026-04-18 17:28:55,781 | INFO     | intersect: 2520039.5420098845
[2026-04-18 19:29:33] 2026-04-18 17:28:55,781 | INFO     | chi2: 0.07152556241414179
[2026-04-18 19:29:33] 2026-04-18 17:28:55,782 | INFO     | current memory leak: 0.83 B/s (using 607 data points, chi2=0.07)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | could have reported an average CPU frequency of 2249 MHz (25 samples)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | ..............................
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | . Timing measurements:
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | . get job = 0 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | . initial setup = 126 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,783 | INFO     | . payload setup = 246 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,784 | INFO     | . stage-in = 0 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,784 | INFO     | . payload execution = 38407 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,784 | INFO     | . stage-out = 1 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,784 | INFO     | . log creation = 0 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,784 | INFO     | ..............................
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | 
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | job summary report
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | --------------------------------------------------
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | PanDA job id: 7102796330
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | task id: 49176142
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | errors: (none)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 19:29:33] 2026-04-18 17:28:55,897 | INFO     | pilot state: finished 
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | transexitcode: 0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | exeerrorcode: 0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | exeerrordiag: 
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | exitcode: 0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | exitmsg: OK
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | cpuconsumptiontime: 152875 s
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | nevents: 400
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | neventsw: 0
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | pid: 14334
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | pgrp: 14334
[2026-04-18 19:29:33] 2026-04-18 17:28:55,898 | INFO     | corecount: 8
[2026-04-18 19:29:33] 2026-04-18 17:28:55,899 | INFO     | event service: False
[2026-04-18 19:29:33] 2026-04-18 17:28:55,899 | INFO     | sizes: {0: 2280982, 1: 2281668, 2: 2283497, 13: 2283497, 38658: 2325503, 38659: 2334503, 38662: 2334687, 38663: 2334945}
[2026-04-18 19:29:33] 2026-04-18 17:28:55,899 | INFO     | --------------------------------------------------
[2026-04-18 19:29:33] 2026-04-18 17:28:55,899 | INFO     | 
[2026-04-18 19:29:33] 2026-04-18 17:28:55,899 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-04-18 19:29:33] 2026-04-18 17:28:55,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 19:29:33] 2026-04-18 17:28:55,931 | INFO     | job 7102796330 has completed (purged errors)
[2026-04-18 19:29:33] 2026-04-18 17:28:55,931 | INFO     | overall cleanup function is called
[2026-04-18 19:29:33] 2026-04-18 17:28:56,940 | INFO     | --- collectZombieJob: --- 10, [14334]
[2026-04-18 19:29:33] 2026-04-18 17:28:56,940 | INFO     | zombie collector waiting for pid 14334
[2026-04-18 19:29:33] 2026-04-18 17:28:56,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 19:29:33] 2026-04-18 17:28:56,940 | INFO     | collected zombie processes
[2026-04-18 19:29:33] 2026-04-18 17:28:56,940 | INFO     | will attempt to kill all subprocesses of pid=14334
[2026-04-18 19:29:33] 2026-04-18 17:28:57,005 | INFO     | process IDs to be killed: [14334] (in reverse order)
[2026-04-18 19:29:33] 2026-04-18 17:28:57,053 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 19:29:33] 2026-04-18 17:28:57,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 19:29:33] 2026-04-18 17:28:57,056 | INFO     | did not find any defunct processes belonging to 14334
[2026-04-18 19:29:33] 2026-04-18 17:28:57,058 | INFO     | did not find any defunct processes belonging to 14334
[2026-04-18 19:29:33] 2026-04-18 17:28:57,058 | INFO     | Ready for new job
[2026-04-18 19:29:33] 2026-04-18 17:28:57,061 | INFO     | **************************************
[2026-04-18 19:29:33] 2026-04-18 17:28:57,061 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 19:29:33] 2026-04-18 17:28:57,061 | INFO     | **************************************
[2026-04-18 19:29:33] 2026-04-18 17:28:57,061 | INFO     | 
[2026-04-18 19:29:33] 2026-04-18 17:28:57,062 | INFO     | pilot is running in a VM
[2026-04-18 19:29:33] 2026-04-18 17:28:57,062 | INFO     | architecture information:
[2026-04-18 19:29:33] 2026-04-18 17:28:57,062 | INFO     | executing command: cat /etc/os-release
[2026-04-18 19:29:33] 2026-04-18 17:28:57,082 | INFO     | cat /etc/os-release:
[2026-04-18 19:29:33] NAME="CentOS Linux"
[2026-04-18 19:29:33] VERSION="7 (Core)"
[2026-04-18 19:29:33] ID="centos"
[2026-04-18 19:29:33] ID_LIKE="rhel fedora"
[2026-04-18 19:29:33] VERSION_ID="7"
[2026-04-18 19:29:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 19:29:33] ANSI_COLOR="0;31"
[2026-04-18 19:29:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 19:29:33] HOME_URL="https://www.centos.org/"
[2026-04-18 19:29:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 19:29:33] 
[2026-04-18 19:29:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 19:29:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 19:29:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 19:29:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 19:29:33] 
[2026-04-18 19:29:33] 2026-04-18 17:28:57,082 | INFO     | **************************************
[2026-04-18 19:29:33] 2026-04-18 17:28:57,585 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-04-18 19:29:33] 2026-04-18 17:28:57,605 | INFO     | sufficient remaining disk space (495519268864 B)
[2026-04-18 19:29:33] 2026-04-18 17:28:57,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 19:29:33] 2026-04-18 17:28:57,606 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 19:29:33] 2026-04-18 17:28:57,606 | INFO     | update_server=False
[2026-04-18 19:29:33] 2026-04-18 17:28:57,606 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 19:29:33] 2026-04-18 17:28:57,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 19:29:33] 2026-04-18 17:28:57,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 19:29:33] 2026-04-18 17:28:57,800 | WARNING  | process 14334 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 19:29:33] 2026-04-18 17:28:57,846 | INFO     | using path: /var/lib/boinc/slots/24/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 19:29:33] 2026-04-18 17:28:57,908 | INFO     | number of running child processes to parent process 14334: 1
[2026-04-18 19:29:33] 2026-04-18 17:28:57,908 | INFO     | maximum number of monitored processes: 8
[2026-04-18 19:29:33] 2026-04-18 17:28:57,909 | INFO     | aborting job monitoring since job object (job id=7102796330) has expired
[2026-04-18 19:29:33] 2026-04-18 17:28:57,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 19:29:33] 2026-04-18 17:28:57,909 | INFO     | will abort loop
[2026-04-18 19:29:33] 2026-04-18 17:28:58,171 | INFO     | all payload control threads have been joined
[2026-04-18 19:29:33] 2026-04-18 17:28:58,172 | INFO     | all data control threads have been joined
[2026-04-18 19:29:33] 2026-04-18 17:28:58,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 19:29:33] 2026-04-18 17:28:58,607 | INFO     | [job] retrieve thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:58,612 | INFO     | [job] queue monitor thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:58,614 | INFO     | all job control threads have been joined
[2026-04-18 19:29:33] 2026-04-18 17:28:58,620 | INFO     | [payload] validate_post thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:58,789 | INFO     | [data] copytool_in thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:58,913 | INFO     | [job] job monitor thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,177 | INFO     | [payload] control thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,178 | INFO     | [data] control thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,254 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,514 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,528 | INFO     | [job] validate thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,562 | INFO     | [payload] failed_post thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:28:59,619 | INFO     | [job] control thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:29:00,071 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:29:00,308 | INFO     | [data] copytool_out thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:29:01,613 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:29:08,292 | INFO     | job.realtimelogging is not enabled
[2026-04-18 19:29:33] 2026-04-18 17:29:09,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 19:29:33] 2026-04-18 17:29:26,583 | INFO     | [monitor] cgroup control has ended
[2026-04-18 19:29:33] 2026-04-18 17:29:27,671 | INFO     | PID=9860 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-18 19:29:33] 2026-04-18 17:29:27,671 | INFO     | .. there are 2 such processes running
[2026-04-18 19:29:33] 2026-04-18 17:29:27,672 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 19:29:33] 2026-04-18 17:29:27,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 19:29:33] 2026-04-18 17:29:27,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 19:29:33] 2026-04-18 17:29:27,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655092971328)>', '<ExcThread(monitor, started 140654625658624)>']
[2026-04-18 19:29:33] 2026-04-18 17:29:28,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 19:29:33] 2026-04-18 17:29:28,678 | INFO     | [monitor] control thread has ended
[2026-04-18 19:29:33] 2026-04-18 17:29:32,753 | INFO     | all workflow threads have been joined
[2026-04-18 19:29:33] 2026-04-18 17:29:32,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 19:29:33] 2026-04-18 17:29:32,754 | INFO     | traces error code: 0
[2026-04-18 19:29:33] 2026-04-18 17:29:32,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 19:29:33] 2026-04-18 17:29:32,883 [wrapper] ==== pilot stdout END ====
[2026-04-18 19:29:33] 2026-04-18 17:29:32,892 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 19:29:33] 2026-04-18 17:29:32,899 [wrapper] pilotpid: 9860
[2026-04-18 19:29:33] 2026-04-18 17:29:32,904 [wrapper] Pilot exit status: 0
[2026-04-18 19:29:33] 2026-04-18 17:29:32,951 [wrapper] pandaids: 7102796330
[2026-04-18 19:29:33] 2026-04-18 17:29:32,992 [wrapper] cleanup supervisor_pilot 16083 9861
[2026-04-18 19:29:33] 2026-04-18 17:29:33,000 [wrapper] Test setup, not cleaning
[2026-04-18 19:29:33] 2026-04-18 17:29:33,006 [wrapper] apfmon messages muted
[2026-04-18 19:29:33] 2026-04-18 17:29:33,010 [wrapper] ==== wrapper stdout END ====
[2026-04-18 19:29:33] 2026-04-18 17:29:33,015 [wrapper] ==== wrapper stderr END ====
[2026-04-18 19:29:33]  *** Error codes and diagnostics ***
[2026-04-18 19:29:33]     "exeErrorCode": 0,
[2026-04-18 19:29:33]     "pilotErrorCode": 0,
[2026-04-18 19:29:33]  *** Listing of results directory ***
[2026-04-18 19:29:33] total 474172
[2026-04-18 19:29:33] -rwx------. 1 boinc boinc     36322 Apr 18 08:13 runpilot2-wrapper.sh
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc    644190 Apr 18 08:20 pilot3.tar.gz
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc      5094 Apr 18 08:22 queuedata.json
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc       100 Apr 18 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 19:29:33] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 08:37 run_atlas
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc       105 Apr 18 08:37 job.xml
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc 238629759 Apr 18 08:37 EVNT.49132722._000001.pool.root.1
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:37 start_atlas.sh
[2026-04-18 19:29:33] drwxrwx--x. 2 boinc boinc        68 Apr 18 08:37 shared
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc    656929 Apr 18 08:37 input.tar.gz
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc      6307 Apr 18 08:37 init_data.xml
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc         0 Apr 18 08:37 boinc_lockfile
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc      2614 Apr 18 08:37 pandaJob.out
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc       415 Apr 18 08:44 workernode_map.json
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc    997901 Apr 18 08:44 agis_schedconf.cvmfs.json
[2026-04-18 19:29:33] drwx------. 5 boinc boinc      4096 Apr 18 08:44 pilot3
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc 234675772 Apr 18 19:28 HITS.49176142._000403.pool.root.1
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc       489 Apr 18 19:28 boinc_task_state.xml
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc      1020 Apr 18 19:28 memory_monitor_summary.json
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc   1512404 Apr 18 19:28 agis_ddmendpoints.agis.ALL.json
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc    607428 Apr 18 19:28 log.49176142._000403.job.log.tgz.1
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc      6332 Apr 18 19:28 heartbeat_new.json
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc      6223 Apr 18 19:28 heartbeat.json
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc      8192 Apr 18 19:29 boinc_mmap_file
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc        29 Apr 18 19:29 wrapper_checkpoint.txt
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc        95 Apr 18 19:29 pilot_heartbeat.json
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc      5469 Apr 18 19:29 pilotlog.txt
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc   3493108 Apr 18 19:29 log.49176142._000403.job.log.1
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc       357 Apr 18 19:29 output.list
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc       410 Apr 18 19:29 runtime_log
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc   4116480 Apr 18 19:29 result.tar.gz
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc      8454 Apr 18 19:29 runtime_log.err
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc       658 Apr 18 19:29 2108d56539b0.diag
[2026-04-18 19:29:33] -rw-r--r--. 1 boinc boinc     20674 Apr 18 19:29 stderr.txt
[2026-04-18 19:29:33] HITS file was successfully produced:
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc 234675772 Apr 18 19:28 shared/HITS.pool.root.1
[2026-04-18 19:29:33]  *** Contents of shared directory: ***
[2026-04-18 19:29:33] total 466896
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc 238629759 Apr 18 08:37 ATLAS.root_0
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:37 start_atlas.sh
[2026-04-18 19:29:33] -rw-r--r--. 2 boinc boinc    656929 Apr 18 08:37 input.tar.gz
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc 234675772 Apr 18 19:28 HITS.pool.root.1
[2026-04-18 19:29:33] -rw-------. 1 boinc boinc   4116480 Apr 18 19:29 result.tar.gz
19:29:34 (5783): run_atlas exited; CPU time 153299.105640
19:29:34 (5783): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN