Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:52 (25764): wrapper (7.7.26015): starting
16:54:52 (25764): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 16:54:52] Arguments: --nthreads 8
[2026-04-18 16:54:52] Threads: 8
[2026-04-18 16:54:52] Checking for CVMFS
[2026-04-18 16:54:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 16:54:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 16:54:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 16:54:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 16:54:54] 2.11.2.0 16103 4176 97540 158587 0 53 24847406 25165825 1060 130560 0 1230889 99.883 3436063 27088 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 16:54:54] CVMFS is ok
[2026-04-18 16:54:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 16:54:54] Checking for apptainer binary...
[2026-04-18 16:54:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 16:54:54] Running /usr/bin/apptainer --version
[2026-04-18 16:54:54] apptainer version 1.3.2-1.el7
[2026-04-18 16:54:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 16:55:05] cg-vwn420.simple-grid.lan
[2026-04-18 16:55:05] apptainer works
[2026-04-18 16:55:05] Set ATHENA_PROC_NUMBER=8
[2026-04-18 16:55:05] Set ATHENA_CORE_NUMBER=8
[2026-04-18 16:55:05] Starting ATLAS job with PandaID=7096357632
[2026-04-18 16:55:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 19:48:54]  *** The last 200 lines of the pilot log: ***
[2026-04-18 19:48:54] 2026-04-18 17:48:00,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 19:48:54] 2026-04-18 17:48:00,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 19:48:54] 2026-04-18 17:48:00,320 | INFO     | fitting pss+swap vs Time
[2026-04-18 19:48:54] 2026-04-18 17:48:00,321 | INFO     | sum of square deviations: 1199940638.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,322 | INFO     | sum of deviations: 102797084283.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,322 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,322 | INFO     | mean y: 2365562.6369426753
[2026-04-18 19:48:54] 2026-04-18 17:48:00,323 | INFO     | intersect: 2365562.6369426753
[2026-04-18 19:48:54] 2026-04-18 17:48:00,323 | INFO     | chi2: 11.824004899183919
[2026-04-18 19:48:54] 2026-04-18 17:48:00,323 | INFO     | sum of square deviations: 1088905998.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,325 | INFO     | sum of deviations: 109915222717.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,325 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,325 | INFO     | mean y: 2374961.8421052634
[2026-04-18 19:48:54] 2026-04-18 17:48:00,325 | INFO     | intersect: 2374961.8421052634
[2026-04-18 19:48:54] 2026-04-18 17:48:00,325 | INFO     | chi2: 11.1798197147504
[2026-04-18 19:48:54] 2026-04-18 17:48:00,326 | INFO     | current chi2=11.1798197147504 (change=5.448113307852067 %)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,326 | INFO     | right removable region: 151
[2026-04-18 19:48:54] 2026-04-18 17:48:00,326 | INFO     | sum of square deviations: 1088905998.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,330 | INFO     | sum of deviations: 46504288485.00001
[2026-04-18 19:48:54] 2026-04-18 17:48:00,331 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,331 | INFO     | mean y: 2442896.4342105263
[2026-04-18 19:48:54] 2026-04-18 17:48:00,331 | INFO     | intersect: 2442896.4342105263
[2026-04-18 19:48:54] 2026-04-18 17:48:00,331 | INFO     | chi2: 5.513839098528234
[2026-04-18 19:48:54] 2026-04-18 17:48:00,332 | INFO     | current chi2=5.513839098528234 (change=53.36741530859147 %)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,332 | INFO     | sum of square deviations: 984941258.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,333 | INFO     | sum of deviations: 893284854.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,333 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,333 | INFO     | mean y: 2509732.523809524
[2026-04-18 19:48:54] 2026-04-18 17:48:00,333 | INFO     | intersect: 2509732.523809524
[2026-04-18 19:48:54] 2026-04-18 17:48:00,334 | INFO     | chi2: 1.866385755733531
[2026-04-18 19:48:54] 2026-04-18 17:48:00,334 | INFO     | current chi2=1.866385755733531 (change=66.15088466706055 %)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,334 | INFO     | sum of square deviations: 887813855.5
[2026-04-18 19:48:54] 2026-04-18 17:48:00,335 | INFO     | sum of deviations: -19775829059.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,336 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,336 | INFO     | mean y: 2541818.2253521127
[2026-04-18 19:48:54] 2026-04-18 17:48:00,336 | INFO     | intersect: 2541818.2253521127
[2026-04-18 19:48:54] 2026-04-18 17:48:00,336 | INFO     | chi2: 0.8880291145893902
[2026-04-18 19:48:54] 2026-04-18 17:48:00,336 | INFO     | current chi2=0.8880291145893902 (change=52.41985147703965 %)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,337 | INFO     | sum of square deviations: 797291228.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,338 | INFO     | sum of deviations: -21690409158.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,338 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,338 | INFO     | mean y: 2544948.0510948906
[2026-04-18 19:48:54] 2026-04-18 17:48:00,338 | INFO     | intersect: 2544948.0510948906
[2026-04-18 19:48:54] 2026-04-18 17:48:00,339 | INFO     | chi2: 0.8536027524424904
[2026-04-18 19:48:54] 2026-04-18 17:48:00,339 | INFO     | current chi2=0.8536027524424904 (change=3.876715479403841 %)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,339 | INFO     | left removable region: 20
[2026-04-18 19:48:54] 2026-04-18 17:48:00,339 | INFO     | sum of square deviations: 697054930.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,340 | INFO     | sum of deviations: -11578483505.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,340 | INFO     | mean x (centered): 0.0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,341 | INFO     | mean y: 2562789.0152671756
[2026-04-18 19:48:54] 2026-04-18 17:48:00,341 | INFO     | intersect: 2562789.0152671756
[2026-04-18 19:48:54] 2026-04-18 17:48:00,341 | INFO     | chi2: 0.0336550708668893
[2026-04-18 19:48:54] 2026-04-18 17:48:00,341 | INFO     | current memory leak: -16.61 B/s (using 131 data points, chi2=0.03)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,342 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,342 | INFO     | ..............................
[2026-04-18 19:48:54] 2026-04-18 17:48:00,342 | INFO     | . Timing measurements:
[2026-04-18 19:48:54] 2026-04-18 17:48:00,342 | INFO     | . get job = 0 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,342 | INFO     | . initial setup = 127 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | . payload setup = 304 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | . stage-in = 0 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | . payload execution = 9676 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | . stage-out = 3 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | . log creation = 1 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,343 | INFO     | ..............................
[2026-04-18 19:48:54] 2026-04-18 17:48:00,488 | INFO     | 
[2026-04-18 19:48:54] 2026-04-18 17:48:00,488 | INFO     | job summary report
[2026-04-18 19:48:54] 2026-04-18 17:48:00,488 | INFO     | --------------------------------------------------
[2026-04-18 19:48:54] 2026-04-18 17:48:00,488 | INFO     | PanDA job id: 7096357632
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | task id: 49545114
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | errors: (none)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | pilot state: finished 
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | transexitcode: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | exeerrorcode: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | exeerrordiag: 
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | exitcode: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,489 | INFO     | exitmsg: OK
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | cpuconsumptiontime: 54571 s
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | nevents: 400
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | neventsw: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | pid: 1806
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | pgrp: 1806
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | corecount: 8
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | event service: False
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | sizes: {0: 2280966, 1: 2281567, 2: 2281679, 3: 2283508, 9985: 2311990, 9989: 2320988, 9990: 2321430}
[2026-04-18 19:48:54] 2026-04-18 17:48:00,490 | INFO     | --------------------------------------------------
[2026-04-18 19:48:54] 2026-04-18 17:48:00,491 | INFO     | 
[2026-04-18 19:48:54] 2026-04-18 17:48:00,491 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 19:48:54] 2026-04-18 17:48:00,895 | INFO     | job 7096357632 has completed (purged errors)
[2026-04-18 19:48:54] 2026-04-18 17:48:00,896 | INFO     | overall cleanup function is called
[2026-04-18 19:48:54] 2026-04-18 17:48:01,910 | INFO     | --- collectZombieJob: --- 10, [1806]
[2026-04-18 19:48:54] 2026-04-18 17:48:01,910 | INFO     | zombie collector waiting for pid 1806
[2026-04-18 19:48:54] 2026-04-18 17:48:01,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 19:48:54] 2026-04-18 17:48:01,910 | INFO     | collected zombie processes
[2026-04-18 19:48:54] 2026-04-18 17:48:01,910 | INFO     | will attempt to kill all subprocesses of pid=1806
[2026-04-18 19:48:54] 2026-04-18 17:48:01,992 | INFO     | process IDs to be killed: [1806] (in reverse order)
[2026-04-18 19:48:54] 2026-04-18 17:48:02,905 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 19:48:54] 2026-04-18 17:48:02,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 19:48:54] 2026-04-18 17:48:02,908 | INFO     | did not find any defunct processes belonging to 1806
[2026-04-18 19:48:54] 2026-04-18 17:48:02,910 | INFO     | did not find any defunct processes belonging to 1806
[2026-04-18 19:48:54] 2026-04-18 17:48:02,911 | INFO     | Ready for new job
[2026-04-18 19:48:54] 2026-04-18 17:48:02,912 | INFO     | **************************************
[2026-04-18 19:48:54] 2026-04-18 17:48:02,913 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 19:48:54] 2026-04-18 17:48:02,913 | INFO     | **************************************
[2026-04-18 19:48:54] 2026-04-18 17:48:02,913 | INFO     | 
[2026-04-18 19:48:54] 2026-04-18 17:48:02,913 | INFO     | pilot is running in a VM
[2026-04-18 19:48:54] 2026-04-18 17:48:02,913 | INFO     | architecture information:
[2026-04-18 19:48:54] 2026-04-18 17:48:02,914 | INFO     | executing command: cat /etc/os-release
[2026-04-18 19:48:54] 2026-04-18 17:48:03,200 | INFO     | cat /etc/os-release:
[2026-04-18 19:48:54] NAME="CentOS Linux"
[2026-04-18 19:48:54] VERSION="7 (Core)"
[2026-04-18 19:48:54] ID="centos"
[2026-04-18 19:48:54] ID_LIKE="rhel fedora"
[2026-04-18 19:48:54] VERSION_ID="7"
[2026-04-18 19:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 19:48:54] ANSI_COLOR="0;31"
[2026-04-18 19:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 19:48:54] HOME_URL="https://www.centos.org/"
[2026-04-18 19:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 19:48:54] 
[2026-04-18 19:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 19:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 19:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 19:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 19:48:54] 
[2026-04-18 19:48:54] 2026-04-18 17:48:03,200 | INFO     | **************************************
[2026-04-18 19:48:54] 2026-04-18 17:48:03,704 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-04-18 19:48:54] 2026-04-18 17:48:03,987 | INFO     | sufficient remaining disk space (495458451456 B)
[2026-04-18 19:48:54] 2026-04-18 17:48:03,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 19:48:54] 2026-04-18 17:48:03,988 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 19:48:54] 2026-04-18 17:48:03,988 | INFO     | update_server=False
[2026-04-18 19:48:54] 2026-04-18 17:48:03,988 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 19:48:54] 2026-04-18 17:48:04,133 | INFO     | all data control threads have been joined
[2026-04-18 19:48:54] 2026-04-18 17:48:04,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 19:48:54] 2026-04-18 17:48:04,414 | INFO     | aborting loop
[2026-04-18 19:48:54] 2026-04-18 17:48:04,457 | INFO     | all payload control threads have been joined
[2026-04-18 19:48:54] 2026-04-18 17:48:04,633 | INFO     | all job control threads have been joined
[2026-04-18 19:48:54] 2026-04-18 17:48:04,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 19:48:54] 2026-04-18 17:48:04,994 | INFO     | [job] retrieve thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,087 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,139 | INFO     | [data] control thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,168 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,372 | INFO     | [job] validate thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,420 | INFO     | [job] job monitor thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,463 | INFO     | [payload] control thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 19:48:54] 2026-04-18 17:48:05,639 | INFO     | [job] control thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:05,762 | INFO     | [payload] validate_post thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 19:48:54] 2026-04-18 17:48:06,033 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,054 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,391 | INFO     | [payload] failed_post thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,407 | INFO     | [data] copytool_in thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,507 | INFO     | [job] queue monitor thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:06,696 | INFO     | [data] copytool_out thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:10,017 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 19:48:54] 2026-04-18 17:48:32,881 | INFO     | 10123s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-18 19:48:54] 2026-04-18 17:48:33,984 | INFO     | PID=29749 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 19:48:54] 2026-04-18 17:48:33,984 | INFO     | .. there are 2 such processes running
[2026-04-18 19:48:54] 2026-04-18 17:48:33,986 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 19:48:54] 2026-04-18 17:48:33,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 19:48:54] 2026-04-18 17:48:33,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 19:48:54] 2026-04-18 17:48:43,104 | INFO     | [monitor] cgroup control has ended
[2026-04-18 19:48:54] 2026-04-18 17:48:44,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602734769984)>', '<ExcThread(monitor, started 140602280744704)>']
[2026-04-18 19:48:54] 2026-04-18 17:48:45,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 19:48:54] 2026-04-18 17:48:45,051 | INFO     | [monitor] control thread has ended
[2026-04-18 19:48:54] 2026-04-18 17:48:49,581 | INFO     | all workflow threads have been joined
[2026-04-18 19:48:54] 2026-04-18 17:48:49,581 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 19:48:54] 2026-04-18 17:48:49,581 | INFO     | traces error code: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:49,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 19:48:54] 2026-04-18 17:48:49,950 [wrapper] ==== pilot stdout END ====
[2026-04-18 19:48:54] 2026-04-18 17:48:50,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 19:48:54] 2026-04-18 17:48:50,142 [wrapper] pilotpid: 29749
[2026-04-18 19:48:54] 2026-04-18 17:48:50,238 [wrapper] Pilot exit status: 0
[2026-04-18 19:48:54] 2026-04-18 17:48:50,340 [wrapper] pandaids: 7096357632
[2026-04-18 19:48:54] 2026-04-18 17:48:51,356 [wrapper] cleanup supervisor_pilot 30932 29750
[2026-04-18 19:48:54] 2026-04-18 17:48:51,462 [wrapper] Test setup, not cleaning
[2026-04-18 19:48:54] 2026-04-18 17:48:51,574 [wrapper] apfmon messages muted
[2026-04-18 19:48:54] 2026-04-18 17:48:51,682 [wrapper] ==== wrapper stdout END ====
[2026-04-18 19:48:54] 2026-04-18 17:48:51,769 [wrapper] ==== wrapper stderr END ====
[2026-04-18 19:48:54]  *** Error codes and diagnostics ***
[2026-04-18 19:48:54]     "exeErrorCode": 0,
[2026-04-18 19:48:54]     "pilotErrorCode": 0,
[2026-04-18 19:48:54]  *** Listing of results directory ***
[2026-04-18 19:48:54] total 461696
[2026-04-18 19:48:54] -rwx------. 1 boinc boinc     36322 Apr 18 07:27 runpilot2-wrapper.sh
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc    644190 Apr 18 07:41 pilot3.tar.gz
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc      5094 Apr 18 07:47 queuedata.json
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc       100 Apr 18 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 19:48:54] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 16:54 run_atlas
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc       105 Apr 18 16:54 job.xml
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc      6306 Apr 18 16:54 init_data.xml
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc 280800545 Apr 18 16:54 EVNT.49539591._000095.pool.root.1
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 16:54 start_atlas.sh
[2026-04-18 19:48:54] drwxrwx--x. 2 boinc boinc        68 Apr 18 16:54 shared
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc    656937 Apr 18 16:54 input.tar.gz
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc         0 Apr 18 16:54 boinc_lockfile
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc      2602 Apr 18 16:55 pandaJob.out
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc   1512404 Apr 18 16:59 agis_ddmendpoints.agis.ALL.json
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc       415 Apr 18 17:01 workernode_map.json
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc    997676 Apr 18 17:01 agis_schedconf.cvmfs.json
[2026-04-18 19:48:54] drwx------. 5 boinc boinc      4096 Apr 18 17:01 pilot3
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc 185365882 Apr 18 19:46 HITS.49545114._019376.pool.root.1
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc       489 Apr 18 19:47 boinc_task_state.xml
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc      1021 Apr 18 19:47 memory_monitor_summary.json
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc    343351 Apr 18 19:47 log.49545114._019376.job.log.tgz.1
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc      6356 Apr 18 19:48 heartbeat_new.json
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc      6247 Apr 18 19:48 heartbeat.json
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc        95 Apr 18 19:48 pilot_heartbeat.json
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc      8192 Apr 18 19:48 boinc_mmap_file
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc        28 Apr 18 19:48 wrapper_checkpoint.txt
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc      4995 Apr 18 19:48 pilotlog.txt
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc    942594 Apr 18 19:48 log.49545114._019376.job.log.1
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc       357 Apr 18 19:48 output.list
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc       410 Apr 18 19:48 runtime_log
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc   1300480 Apr 18 19:48 result.tar.gz
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc      8438 Apr 18 19:48 runtime_log.err
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc       656 Apr 18 19:48 1625a648725c.diag
[2026-04-18 19:48:54] -rw-r--r--. 1 boinc boinc     20451 Apr 18 19:48 stderr.txt
[2026-04-18 19:48:54] HITS file was successfully produced:
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc 185365882 Apr 18 19:46 shared/HITS.pool.root.1
[2026-04-18 19:48:54]  *** Contents of shared directory: ***
[2026-04-18 19:48:54] total 457176
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc 280800545 Apr 18 16:54 ATLAS.root_0
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc     15665 Apr 18 16:54 start_atlas.sh
[2026-04-18 19:48:54] -rw-r--r--. 2 boinc boinc    656937 Apr 18 16:54 input.tar.gz
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc 185365882 Apr 18 19:46 HITS.pool.root.1
[2026-04-18 19:48:54] -rw-------. 1 boinc boinc   1300480 Apr 18 19:48 result.tar.gz
19:48:55 (25764): run_atlas exited; CPU time 54669.632349
19:48:55 (25764): called boinc_finish(0)

</stderr_txt>
]]>

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