Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:07:31 (28872): wrapper (7.7.26015): starting
08:07:31 (28872): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 08:07:31] Arguments: --nthreads 8
[2026-04-18 08:07:31] Threads: 8
[2026-04-18 08:07:31] Checking for CVMFS
[2026-04-18 08:07:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 08:07:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 08:07:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 08:07:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 08:07:35] 2.11.2.0 16103 3648 81396 158573 1 206 24783894 25165824 1060 130560 0 1092556 99.870 3417684 30931 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 08:07:35] CVMFS is ok
[2026-04-18 08:07:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 08:07:35] Checking for apptainer binary...
[2026-04-18 08:07:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 08:07:35] Running /usr/bin/apptainer --version
[2026-04-18 08:07:35] apptainer version 1.3.2-1.el7
[2026-04-18 08:07:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 08:07:48] cg-vwn420.simple-grid.lan
[2026-04-18 08:07:48] apptainer works
[2026-04-18 08:07:48] Set ATHENA_PROC_NUMBER=8
[2026-04-18 08:07:48] Set ATHENA_CORE_NUMBER=8
[2026-04-18 08:07:48] Starting ATLAS job with PandaID=7096357617
[2026-04-18 08:07:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 12:27:32]  *** The last 200 lines of the pilot log: ***
[2026-04-18 12:27:32] 2026-04-18 10:26:26,449 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,449 | INFO     | log transfer has been attempted: DONE
[2026-04-18 12:27:32] 2026-04-18 10:26:26,449 | INFO     | job 7096357617 has finished - writing final server update
[2026-04-18 12:27:32] 2026-04-18 10:26:26,450 | INFO     | total number of processed events: 400 (read)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,452 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7096357617/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,453 | INFO     | extracted standard info from prmon json
[2026-04-18 12:27:32] 2026-04-18 10:26:26,453 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 12:27:32] 2026-04-18 10:26:26,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 12:27:32] 2026-04-18 10:26:26,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 12:27:32] 2026-04-18 10:26:26,459 | INFO     | fitting pss+swap vs Time
[2026-04-18 12:27:32] 2026-04-18 10:26:26,459 | INFO     | sum of square deviations: 4504437945.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,462 | INFO     | sum of deviations: 51135525086.5
[2026-04-18 12:27:32] 2026-04-18 10:26:26,462 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,462 | INFO     | mean y: 2493586.381147541
[2026-04-18 12:27:32] 2026-04-18 10:26:26,462 | INFO     | intersect: 2493586.381147541
[2026-04-18 12:27:32] 2026-04-18 10:26:26,463 | INFO     | chi2: 7.382799209296026
[2026-04-18 12:27:32] 2026-04-18 10:26:26,463 | INFO     | sum of square deviations: 4233158440.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,466 | INFO     | sum of deviations: 66710805055.000015
[2026-04-18 12:27:32] 2026-04-18 10:26:26,466 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,466 | INFO     | mean y: 2502189.5020920504
[2026-04-18 12:27:32] 2026-04-18 10:26:26,466 | INFO     | intersect: 2502189.5020920504
[2026-04-18 12:27:32] 2026-04-18 10:26:26,467 | INFO     | chi2: 6.676655239401445
[2026-04-18 12:27:32] 2026-04-18 10:26:26,467 | INFO     | current chi2=6.676655239401445 (change=9.564718609784792 %)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,467 | INFO     | right removable region: 238
[2026-04-18 12:27:32] 2026-04-18 10:26:26,467 | INFO     | sum of square deviations: 4233158440.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,469 | INFO     | sum of deviations: -35252306870.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,469 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,470 | INFO     | mean y: 2542108.60251046
[2026-04-18 12:27:32] 2026-04-18 10:26:26,470 | INFO     | intersect: 2542108.60251046
[2026-04-18 12:27:32] 2026-04-18 10:26:26,470 | INFO     | chi2: 2.4815888503574994
[2026-04-18 12:27:32] 2026-04-18 10:26:26,470 | INFO     | current chi2=2.4815888503574994 (change=66.3868841613244 %)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,471 | INFO     | sum of square deviations: 3972995422.5
[2026-04-18 12:27:32] 2026-04-18 10:26:26,473 | INFO     | sum of deviations: -77885598490.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,473 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,473 | INFO     | mean y: 2566954.3846153845
[2026-04-18 12:27:32] 2026-04-18 10:26:26,473 | INFO     | intersect: 2566954.3846153845
[2026-04-18 12:27:32] 2026-04-18 10:26:26,474 | INFO     | chi2: 1.038339976446521
[2026-04-18 12:27:32] 2026-04-18 10:26:26,474 | INFO     | current chi2=1.038339976446521 (change=58.158259121089415 %)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,474 | INFO     | sum of square deviations: 3723716330.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,476 | INFO     | sum of deviations: -77541285453.99998
[2026-04-18 12:27:32] 2026-04-18 10:26:26,476 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,476 | INFO     | mean y: 2566706.3973799124
[2026-04-18 12:27:32] 2026-04-18 10:26:26,476 | INFO     | intersect: 2566706.3973799124
[2026-04-18 12:27:32] 2026-04-18 10:26:26,477 | INFO     | chi2: 1.0146353413617997
[2026-04-18 12:27:32] 2026-04-18 10:26:26,477 | INFO     | current chi2=1.0146353413617997 (change=2.2829358035356657 %)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,477 | INFO     | left removable region: 15
[2026-04-18 12:27:32] 2026-04-18 10:26:26,478 | INFO     | sum of square deviations: 3438620752.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,479 | INFO     | sum of deviations: -60032500167.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,480 | INFO     | mean x (centered): 0.0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,480 | INFO     | mean y: 2577728.2331838566
[2026-04-18 12:27:32] 2026-04-18 10:26:26,480 | INFO     | intersect: 2577728.2331838566
[2026-04-18 12:27:32] 2026-04-18 10:26:26,480 | INFO     | chi2: 0.2193256260286583
[2026-04-18 12:27:32] 2026-04-18 10:26:26,481 | INFO     | current memory leak: -17.46 B/s (using 223 data points, chi2=0.22)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,481 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,481 | INFO     | ..............................
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . Timing measurements:
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . get job = 0 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . initial setup = 126 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . payload setup = 156 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . stage-in = 0 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . payload execution = 14970 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . stage-out = 3 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | . log creation = 1 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,482 | INFO     | ..............................
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | 
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | job summary report
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | --------------------------------------------------
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | PanDA job id: 7096357617
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | task id: 49545114
[2026-04-18 12:27:32] 2026-04-18 10:26:26,967 | INFO     | errors: (none)
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | pilot state: finished 
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | transexitcode: 0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | exeerrorcode: 0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | exeerrordiag: 
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | exitcode: 0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,968 | INFO     | exitmsg: OK
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | cpuconsumptiontime: 56529 s
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | nevents: 400
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | neventsw: 0
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | pid: 4881
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | pgrp: 4881
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | corecount: 8
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | event service: False
[2026-04-18 12:27:32] 2026-04-18 10:26:26,969 | INFO     | sizes: {0: 2280966, 1: 2281651, 2: 2281878, 3: 2283508, 13: 2283508, 15131: 2314610, 15135: 2323608, 15137: 2323664, 15138: 2323858}
[2026-04-18 12:27:32] 2026-04-18 10:26:26,970 | INFO     | --------------------------------------------------
[2026-04-18 12:27:32] 2026-04-18 10:26:26,970 | INFO     | 
[2026-04-18 12:27:32] 2026-04-18 10:26:26,970 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-04-18 12:27:32] 2026-04-18 10:26:27,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 12:27:32] 2026-04-18 10:26:27,487 | INFO     | job 7096357617 has completed (purged errors)
[2026-04-18 12:27:32] 2026-04-18 10:26:27,487 | INFO     | overall cleanup function is called
[2026-04-18 12:27:32] 2026-04-18 10:26:28,496 | INFO     | --- collectZombieJob: --- 10, [4881]
[2026-04-18 12:27:32] 2026-04-18 10:26:28,496 | INFO     | zombie collector waiting for pid 4881
[2026-04-18 12:27:32] 2026-04-18 10:26:28,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 12:27:32] 2026-04-18 10:26:28,496 | INFO     | collected zombie processes
[2026-04-18 12:27:32] 2026-04-18 10:26:28,496 | INFO     | will attempt to kill all subprocesses of pid=4881
[2026-04-18 12:27:32] 2026-04-18 10:26:28,587 | INFO     | process IDs to be killed: [4881] (in reverse order)
[2026-04-18 12:27:32] 2026-04-18 10:26:29,390 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 12:27:32] 2026-04-18 10:26:29,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 12:27:32] 2026-04-18 10:26:29,393 | INFO     | did not find any defunct processes belonging to 4881
[2026-04-18 12:27:32] 2026-04-18 10:26:29,395 | INFO     | did not find any defunct processes belonging to 4881
[2026-04-18 12:27:32] 2026-04-18 10:26:29,395 | INFO     | Ready for new job
[2026-04-18 12:27:32] 2026-04-18 10:26:29,397 | INFO     | **************************************
[2026-04-18 12:27:32] 2026-04-18 10:26:29,397 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 12:27:32] 2026-04-18 10:26:29,397 | INFO     | **************************************
[2026-04-18 12:27:32] 2026-04-18 10:26:29,397 | INFO     | 
[2026-04-18 12:27:32] 2026-04-18 10:26:29,398 | INFO     | pilot is running in a VM
[2026-04-18 12:27:32] 2026-04-18 10:26:29,398 | INFO     | architecture information:
[2026-04-18 12:27:32] 2026-04-18 10:26:29,399 | INFO     | executing command: cat /etc/os-release
[2026-04-18 12:27:32] 2026-04-18 10:26:29,635 | INFO     | cat /etc/os-release:
[2026-04-18 12:27:32] NAME="CentOS Linux"
[2026-04-18 12:27:32] VERSION="7 (Core)"
[2026-04-18 12:27:32] ID="centos"
[2026-04-18 12:27:32] ID_LIKE="rhel fedora"
[2026-04-18 12:27:32] VERSION_ID="7"
[2026-04-18 12:27:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 12:27:32] ANSI_COLOR="0;31"
[2026-04-18 12:27:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 12:27:32] HOME_URL="https://www.centos.org/"
[2026-04-18 12:27:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 12:27:32] 
[2026-04-18 12:27:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 12:27:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 12:27:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 12:27:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 12:27:32] 
[2026-04-18 12:27:32] 2026-04-18 10:26:29,636 | INFO     | **************************************
[2026-04-18 12:27:32] 2026-04-18 10:26:30,139 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-04-18 12:27:32] 2026-04-18 10:26:30,351 | INFO     | sufficient remaining disk space (496095985664 B)
[2026-04-18 12:27:32] 2026-04-18 10:26:30,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 12:27:32] 2026-04-18 10:26:30,352 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 12:27:32] 2026-04-18 10:26:30,352 | INFO     | update_server=False
[2026-04-18 12:27:32] 2026-04-18 10:26:30,352 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 12:27:32] 2026-04-18 10:26:30,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:27:32] 2026-04-18 10:26:30,353 | INFO     | aborting loop
[2026-04-18 12:27:32] 2026-04-18 10:26:30,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 12:27:32] 2026-04-18 10:26:31,240 | INFO     | all payload control threads have been joined
[2026-04-18 12:27:32] 2026-04-18 10:26:31,280 | INFO     | all data control threads have been joined
[2026-04-18 12:27:32] 2026-04-18 10:26:31,355 | INFO     | all job control threads have been joined
[2026-04-18 12:27:32] 2026-04-18 10:26:31,358 | INFO     | [job] retrieve thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,359 | INFO     | [job] job monitor thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,464 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,586 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:27:32] 2026-04-18 10:26:31,653 | INFO     | [data] copytool_in thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,662 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:31,908 | INFO     | [payload] failed_post thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,246 | INFO     | [payload] control thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,258 | INFO     | [payload] validate_post thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,286 | INFO     | [data] control thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,360 | INFO     | [data] copytool_out thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,361 | INFO     | [job] control thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,450 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 12:27:32] 2026-04-18 10:26:32,462 | INFO     | [job] validate thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:32,616 | INFO     | [job] queue monitor thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:36,465 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 12:27:32] 2026-04-18 10:26:52,773 [wrapper] supervise_pilot (15 min periods counter: 18)
[2026-04-18 12:27:32] 2026-04-18 10:26:59,931 | INFO     | PID=383 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-04-18 12:27:32] 2026-04-18 10:26:59,931 | INFO     | .. there are 2 such processes running
[2026-04-18 12:27:32] 2026-04-18 10:26:59,932 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 12:27:32] 2026-04-18 10:26:59,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 12:27:32] 2026-04-18 10:26:59,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 12:27:32] 2026-04-18 10:27:21,199 | INFO     | [monitor] cgroup control has ended
[2026-04-18 12:27:32] 2026-04-18 10:27:21,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664754595648)>', '<ExcThread(monitor, started 139664308545280)>']
[2026-04-18 12:27:32] 2026-04-18 10:27:22,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 12:27:32] 2026-04-18 10:27:22,063 | INFO     | [monitor] control thread has ended
[2026-04-18 12:27:32] 2026-04-18 10:27:26,349 | INFO     | all workflow threads have been joined
[2026-04-18 12:27:32] 2026-04-18 10:27:26,349 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 12:27:32] 2026-04-18 10:27:26,349 | INFO     | traces error code: 0
[2026-04-18 12:27:32] 2026-04-18 10:27:26,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 12:27:32] 2026-04-18 10:27:26,688 [wrapper] ==== pilot stdout END ====
[2026-04-18 12:27:32] 2026-04-18 10:27:26,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 12:27:32] 2026-04-18 10:27:26,861 [wrapper] pilotpid: 383
[2026-04-18 12:27:32] 2026-04-18 10:27:26,912 [wrapper] Pilot exit status: 0
[2026-04-18 12:27:32] 2026-04-18 10:27:27,335 [wrapper] pandaids: 7096357617
[2026-04-18 12:27:32] 2026-04-18 10:27:28,429 [wrapper] cleanup supervisor_pilot 10803 384
[2026-04-18 12:27:32] 2026-04-18 10:27:28,545 [wrapper] Test setup, not cleaning
[2026-04-18 12:27:32] 2026-04-18 10:27:28,657 [wrapper] apfmon messages muted
[2026-04-18 12:27:32] 2026-04-18 10:27:28,746 [wrapper] ==== wrapper stdout END ====
[2026-04-18 12:27:32] 2026-04-18 10:27:28,841 [wrapper] ==== wrapper stderr END ====
[2026-04-18 12:27:32]  *** Error codes and diagnostics ***
[2026-04-18 12:27:32]     "exeErrorCode": 0,
[2026-04-18 12:27:32]     "pilotErrorCode": 0,
[2026-04-18 12:27:32]  *** Listing of results directory ***
[2026-04-18 12:27:32] total 463564
[2026-04-18 12:27:32] -rwx------. 1 boinc boinc     36322 Apr 18 07:27 runpilot2-wrapper.sh
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc    644190 Apr 18 07:41 pilot3.tar.gz
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc      5094 Apr 18 07:47 queuedata.json
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc       100 Apr 18 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 12:27:32] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 08:07 run_atlas
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc       105 Apr 18 08:07 job.xml
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc 281455523 Apr 18 08:07 EVNT.49539591._000094.pool.root.1
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:07 start_atlas.sh
[2026-04-18 12:27:32] drwxrwx--x. 2 boinc boinc        68 Apr 18 08:07 shared
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc    656940 Apr 18 08:07 input.tar.gz
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc      6306 Apr 18 08:07 init_data.xml
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc         0 Apr 18 08:07 boinc_lockfile
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc      2602 Apr 18 08:07 pandaJob.out
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc       415 Apr 18 08:13 workernode_map.json
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc    997901 Apr 18 08:13 agis_schedconf.cvmfs.json
[2026-04-18 12:27:32] drwx------. 5 boinc boinc      4096 Apr 18 08:13 pilot3
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc 185605359 Apr 18 12:24 HITS.49545114._019361.pool.root.1
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc       489 Apr 18 12:25 boinc_task_state.xml
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc        95 Apr 18 12:26 pilot_heartbeat.json
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc      1012 Apr 18 12:26 memory_monitor_summary.json
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc   1512404 Apr 18 12:26 agis_ddmendpoints.agis.ALL.json
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc    399122 Apr 18 12:26 log.49545114._019361.job.log.tgz.1
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc      6333 Apr 18 12:26 heartbeat_new.json
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc      6224 Apr 18 12:26 heartbeat.json
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc        28 Apr 18 12:27 wrapper_checkpoint.txt
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc      8192 Apr 18 12:27 boinc_mmap_file
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc      4877 Apr 18 12:27 pilotlog.txt
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc   1392261 Apr 18 12:27 log.49545114._019361.job.log.1
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc       357 Apr 18 12:27 output.list
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc       410 Apr 18 12:27 runtime_log
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc   1812480 Apr 18 12:27 result.tar.gz
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc      8438 Apr 18 12:27 runtime_log.err
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc       656 Apr 18 12:27 16254269be19.diag
[2026-04-18 12:27:32] -rw-r--r--. 1 boinc boinc     20627 Apr 18 12:27 stderr.txt
[2026-04-18 12:27:32] HITS file was successfully produced:
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc 185605359 Apr 18 12:24 shared/HITS.pool.root.1
[2026-04-18 12:27:32]  *** Contents of shared directory: ***
[2026-04-18 12:27:32] total 458548
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc 281455523 Apr 18 08:07 ATLAS.root_0
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:07 start_atlas.sh
[2026-04-18 12:27:32] -rw-r--r--. 2 boinc boinc    656940 Apr 18 08:07 input.tar.gz
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc 185605359 Apr 18 12:24 HITS.pool.root.1
[2026-04-18 12:27:32] -rw-------. 1 boinc boinc   1812480 Apr 18 12:27 result.tar.gz
12:27:33 (28872): run_atlas exited; CPU time 56689.019044
12:27:33 (28872): called boinc_finish(0)

</stderr_txt>
]]>

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