Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:55:31 (449710): wrapper (7.7.26015): starting
07:55:31 (449710): wrapper: running run_atlas (--nthreads 4)
[2026-04-19 07:55:31] Arguments: --nthreads 4
[2026-04-19 07:55:31] Threads: 4
[2026-04-19 07:55:31] Checking for CVMFS
[2026-04-19 07:55:31] No cvmfs_config command found, will try listing directly
[2026-04-19 07:55:31] CVMFS is ok
[2026-04-19 07:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-19 07:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-19 07:55:31] Further information can be found at the LHC@home message board.
[2026-04-19 07:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-19 07:55:31] Checking for apptainer binary...
[2026-04-19 07:55:31] which: no apptainer in ((null))
[2026-04-19 07:55:31] apptainer is not installed, using version from CVMFS
[2026-04-19 07:55:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-19 07:55:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-19 07:55:31] apptainer works
[2026-04-19 07:55:31] Set ATHENA_PROC_NUMBER=4
[2026-04-19 07:55:31] Set ATHENA_CORE_NUMBER=4
[2026-04-19 07:55:31] Starting ATLAS job with PandaID=7096310245
[2026-04-19 07:55:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 10:46:40]  *** The last 200 lines of the pilot log: ***
[2026-04-19 10:46:40] 2026-04-19 08:33:14,643 | INFO     | job 7096310245 has finished - writing final server update
[2026-04-19 10:46:40] 2026-04-19 08:33:14,643 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9044/.job.ad'
[2026-04-19 10:46:40] 2026-04-19 08:33:14,644 | INFO     | total number of processed events: 400 (read)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,668 | INFO     | using path: /var/lib/boinc/var/slot52/slots/4/PanDA_Pilot-7096310245/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,668 | INFO     | extracted standard info from prmon json
[2026-04-19 10:46:40] 2026-04-19 08:33:14,668 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 10:46:40] 2026-04-19 08:33:14,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 10:46:40] 2026-04-19 08:33:14,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 10:46:40] 2026-04-19 08:33:14,672 | INFO     | fitting pss+swap vs Time
[2026-04-19 10:46:40] 2026-04-19 08:33:14,673 | INFO     | sum of square deviations: 1154663510.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | sum of deviations: 14997658250.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | mean y: 2300060.2
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | intersect: 2300060.2
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | chi2: 2.2489016876636496
[2026-04-19 10:46:40] 2026-04-19 08:33:14,674 | INFO     | sum of square deviations: 1046484737.5
[2026-04-19 10:46:40] 2026-04-19 08:33:14,675 | INFO     | sum of deviations: 24097024590.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,675 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,675 | INFO     | mean y: 2312524.026666667
[2026-04-19 10:46:40] 2026-04-19 08:33:14,676 | INFO     | intersect: 2312524.026666667
[2026-04-19 10:46:40] 2026-04-19 08:33:14,676 | INFO     | chi2: 1.431956419994271
[2026-04-19 10:46:40] 2026-04-19 08:33:14,676 | INFO     | current chi2=1.431956419994271 (change=36.32641089429263 %)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,676 | INFO     | sum of square deviations: 945282840.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,677 | INFO     | sum of deviations: 23200616413.999996
[2026-04-19 10:46:40] 2026-04-19 08:33:14,677 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,677 | INFO     | mean y: 2311173.4620689657
[2026-04-19 10:46:40] 2026-04-19 08:33:14,677 | INFO     | intersect: 2311173.4620689657
[2026-04-19 10:46:40] 2026-04-19 08:33:14,677 | INFO     | chi2: 1.432830233781712
[2026-04-19 10:46:40] 2026-04-19 08:33:14,678 | INFO     | current chi2=1.432830233781712 (change=-0.06102237297449383 %)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,678 | INFO     | right removable region: 144
[2026-04-19 10:46:40] 2026-04-19 08:33:14,678 | INFO     | sum of square deviations: 1046484737.5
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | sum of deviations: -6572136401.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | mean y: 2330015.0933333333
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | intersect: 2330015.0933333333
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | chi2: 0.844534108921106
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | current chi2=0.844534108921106 (change=62.446819549569554 %)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,679 | INFO     | sum of square deviations: 945282840.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,680 | INFO     | sum of deviations: -6898227944.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,680 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,680 | INFO     | mean y: 2330495.5724137933
[2026-04-19 10:46:40] 2026-04-19 08:33:14,680 | INFO     | intersect: 2330495.5724137933
[2026-04-19 10:46:40] 2026-04-19 08:33:14,681 | INFO     | chi2: 0.8445602218039369
[2026-04-19 10:46:40] 2026-04-19 08:33:14,681 | INFO     | current chi2=0.8445602218039369 (change=-0.0030919867599178766 %)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,681 | INFO     | left removable region: 10
[2026-04-19 10:46:40] 2026-04-19 08:33:14,681 | INFO     | sum of square deviations: 746051197.5
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | sum of deviations: 2135474092.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | mean x (centered): 0.0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | mean y: 2344643.417910448
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | intersect: 2344643.417910448
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | chi2: 0.0004385070244700687
[2026-04-19 10:46:40] 2026-04-19 08:33:14,682 | INFO     | current memory leak: 2.86 B/s (using 134 data points, chi2=0.00)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | could have reported an average CPU frequency of 2719 MHz (9 samples)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | ..............................
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . Timing measurements:
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . get job = 0 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . initial setup = 8 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . payload setup = 16 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . stage-in = 0 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . payload execution = 9405 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,683 | INFO     | . stage-out = 0 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,684 | INFO     | . log creation = 0 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,684 | INFO     | ..............................
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | 
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | job summary report
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | --------------------------------------------------
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | PanDA job id: 7096310245
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | task id: 49545114
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | errors: (none)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | pilot state: finished 
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | transexitcode: 0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | exeerrorcode: 0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | exeerrordiag: 
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | exitcode: 0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | exitmsg: OK
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | cpuconsumptiontime: 36415 s
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | nevents: 400
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | neventsw: 0
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | pid: 459445
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | pgrp: 459445
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | corecount: 4
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | event service: False
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | sizes: {0: 2281805, 1: 2283435, 11: 2283463, 9425: 2312236, 9427: 2321256, 9428: 2321698}
[2026-04-19 10:46:40] 2026-04-19 08:33:14,781 | INFO     | --------------------------------------------------
[2026-04-19 10:46:40] 2026-04-19 08:33:14,782 | INFO     | 
[2026-04-19 10:46:40] 2026-04-19 08:33:14,782 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/4
[2026-04-19 10:46:40] 2026-04-19 08:33:14,814 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,814 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | job 7096310245 has completed (purged errors)
[2026-04-19 10:46:40] 2026-04-19 08:33:14,816 | INFO     | overall cleanup function is called
[2026-04-19 10:46:40] 2026-04-19 08:33:15,825 | INFO     | --- collectZombieJob: --- 10, [459445]
[2026-04-19 10:46:40] 2026-04-19 08:33:15,825 | INFO     | zombie collector waiting for pid 459445
[2026-04-19 10:46:40] 2026-04-19 08:33:15,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 10:46:40] 2026-04-19 08:33:15,825 | INFO     | collected zombie processes
[2026-04-19 10:46:40] 2026-04-19 08:33:15,825 | INFO     | will attempt to kill all subprocesses of pid=459445
[2026-04-19 10:46:40] 2026-04-19 08:33:16,526 | INFO     | process IDs to be killed: [459445] (in reverse order)
[2026-04-19 10:46:40] 2026-04-19 08:33:16,827 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 10:46:40] 2026-04-19 08:33:16,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 10:46:40] 2026-04-19 08:33:16,851 | INFO     | did not find any defunct processes belonging to 459445
[2026-04-19 10:46:40] 2026-04-19 08:33:16,868 | INFO     | did not find any defunct processes belonging to 459445
[2026-04-19 10:46:40] 2026-04-19 08:33:16,868 | INFO     | Ready for new job
[2026-04-19 10:46:40] 2026-04-19 08:33:16,869 | INFO     | **************************************
[2026-04-19 10:46:40] 2026-04-19 08:33:16,870 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 10:46:40] 2026-04-19 08:33:16,870 | INFO     | **************************************
[2026-04-19 10:46:40] 2026-04-19 08:33:16,870 | INFO     | 
[2026-04-19 10:46:40] 2026-04-19 08:33:16,876 | INFO     | architecture information:
[2026-04-19 10:46:40] 2026-04-19 08:33:16,876 | INFO     | executing command: cat /etc/os-release
[2026-04-19 10:46:40] 2026-04-19 08:33:16,899 | INFO     | cat /etc/os-release:
[2026-04-19 10:46:40] NAME="CentOS Linux"
[2026-04-19 10:46:40] VERSION="7 (Core)"
[2026-04-19 10:46:40] ID="centos"
[2026-04-19 10:46:40] ID_LIKE="rhel fedora"
[2026-04-19 10:46:40] VERSION_ID="7"
[2026-04-19 10:46:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 10:46:40] ANSI_COLOR="0;31"
[2026-04-19 10:46:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 10:46:40] HOME_URL="https://www.centos.org/"
[2026-04-19 10:46:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 10:46:40] 
[2026-04-19 10:46:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 10:46:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 10:46:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 10:46:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 10:46:40] 
[2026-04-19 10:46:40] 2026-04-19 08:33:16,900 | INFO     | **************************************
[2026-04-19 10:46:40] 2026-04-19 08:33:17,403 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/4
[2026-04-19 10:46:40] 2026-04-19 08:33:17,432 | INFO     | sufficient remaining disk space (141810466816 B)
[2026-04-19 10:46:40] 2026-04-19 08:33:17,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 10:46:40] 2026-04-19 08:33:17,432 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 10:46:40] 2026-04-19 08:33:17,433 | INFO     | update_server=False
[2026-04-19 10:46:40] 2026-04-19 08:33:17,433 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 10:46:40] 2026-04-19 08:33:17,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 10:46:40] 2026-04-19 08:33:17,586 | INFO     | all data control threads have been joined
[2026-04-19 10:46:40] 2026-04-19 08:33:17,916 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-19 10:46:40] 2026-04-19 08:33:17,917 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-19 10:46:40] 2026-04-19 08:33:17,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 10:46:40] 2026-04-19 08:33:17,917 | INFO     | will abort loop
[2026-04-19 10:46:40] 2026-04-19 08:33:18,106 | INFO     | all job control threads have been joined
[2026-04-19 10:46:40] 2026-04-19 08:33:18,423 | INFO     | all payload control threads have been joined
[2026-04-19 10:46:40] 2026-04-19 08:33:18,438 | INFO     | [job] retrieve thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:18,522 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:18,591 | INFO     | [data] control thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:18,922 | INFO     | [job] job monitor thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,001 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,010 | INFO     | job.realtimelogging is not enabled
[2026-04-19 10:46:40] 2026-04-19 08:33:19,111 | INFO     | [job] control thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,192 | INFO     | [job] validate thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,231 | INFO     | [data] copytool_in thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,409 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,428 | INFO     | [payload] control thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,439 | INFO     | [data] copytool_out thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 10:46:40] 2026-04-19 08:33:19,996 | INFO     | [payload] validate_post thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:19,998 | INFO     | [payload] failed_post thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:20,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:20,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 10:46:40] 2026-04-19 08:33:20,796 | INFO     | [job] queue monitor thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:24,648 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 10:46:40] 2026-04-19 08:33:47,318 | INFO     | PID=454124 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 10:46:40] 2026-04-19 08:33:47,318 | INFO     | .. there are 15 such processes running
[2026-04-19 10:46:40] 2026-04-19 08:33:47,320 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 10:46:40] 2026-04-19 08:33:47,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 10:46:40] 2026-04-19 08:33:47,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 10:46:40] 2026-04-19 08:34:10,721 | INFO     | [monitor] cgroup control has ended
[2026-04-19 10:46:40] 2026-04-19 08:34:11,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23029391517504)>', '<ExcThread(monitor, started 23029152491264)>']
[2026-04-19 10:46:40] 2026-04-19 08:34:12,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 10:46:40] 2026-04-19 08:34:12,432 | INFO     | [monitor] control thread has ended
[2026-04-19 10:46:40] 2026-04-19 08:34:16,580 | INFO     | all workflow threads have been joined
[2026-04-19 10:46:40] 2026-04-19 08:34:16,580 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 10:46:40] 2026-04-19 08:34:16,580 | INFO     | traces error code: 0
[2026-04-19 10:46:40] 2026-04-19 08:34:16,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 10:46:40] 2026-04-19 08:34:16,764 [wrapper] ==== pilot stdout END ====
[2026-04-19 10:46:40] 2026-04-19 08:34:16,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 10:46:40] 2026-04-19 08:34:16,775 [wrapper] pilotpid: 454124
[2026-04-19 10:46:40] 2026-04-19 08:34:16,778 [wrapper] Pilot exit status: 0
[2026-04-19 10:46:40] 2026-04-19 08:34:16,791 [wrapper] pandaids: 7096310245
[2026-04-19 10:46:40] 2026-04-19 08:34:16,991 [wrapper] cleanup supervisor_pilot  678116 454125
[2026-04-19 10:46:40] 2026-04-19 08:34:16,996 [wrapper] Test setup, not cleaning
[2026-04-19 10:46:40] 2026-04-19 08:34:17,000 [wrapper] apfmon messages muted
[2026-04-19 10:46:40] 2026-04-19 08:34:17,004 [wrapper] ==== wrapper stdout END ====
[2026-04-19 10:46:40] 2026-04-19 08:34:17,008 [wrapper] ==== wrapper stderr END ====
[2026-04-19 10:46:40]  *** Error codes and diagnostics ***
[2026-04-19 10:46:40]     "exeErrorCode": 0,
[2026-04-19 10:46:40]     "pilotErrorCode": 0,
[2026-04-19 10:46:40]  *** Listing of results directory ***
[2026-04-19 10:46:40] total 466216
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc    644190 Apr 18 07:07 pilot3.tar.gz
[2026-04-19 10:46:40] -rwx------. 1 boinc boinc     36322 Apr 18 07:10 runpilot2-wrapper.sh
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc      5094 Apr 18 07:24 queuedata.json
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc       100 Apr 19 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 10:46:40] -rwxr-xr-x. 1 boinc boinc      7986 Apr 19 07:04 run_atlas
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc       105 Apr 19 07:04 job.xml
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc      6538 Apr 19 07:55 init_data.xml
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc 283310679 Apr 19 07:55 EVNT.49539591._000057.pool.root.1
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc     15665 Apr 19 07:55 start_atlas.sh
[2026-04-19 10:46:40] drwxrwx--x. 2 boinc boinc      4096 Apr 19 07:55 shared
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc    656939 Apr 19 07:55 input.tar.gz
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc         0 Apr 19 07:55 boinc_lockfile
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc      2602 Apr 19 07:55 pandaJob.out
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc    997681 Apr 19 07:55 agis_schedconf.cvmfs.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc   1512404 Apr 19 07:55 agis_ddmendpoints.agis.ALL.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc       443 Apr 19 07:55 workernode_map.json
[2026-04-19 10:46:40] drwx------. 5 boinc boinc      4096 Apr 19 07:55 pilot3
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc 187714475 Apr 19 10:32 HITS.49545114._018666.pool.root.1
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc       486 Apr 19 10:33 boinc_task_state.xml
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc      1031 Apr 19 10:33 memory_monitor_summary.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc    280425 Apr 19 10:33 log.49545114._018666.job.log.tgz.1
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc      6364 Apr 19 10:33 heartbeat_new.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc      6255 Apr 19 10:33 heartbeat.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc        95 Apr 19 10:33 pilot_heartbeat.json
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc      5087 Apr 19 10:34 pilotlog.txt
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc    879394 Apr 19 10:34 log.49545114._018666.job.log.1
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc       357 Apr 19 10:34 output.list
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc       410 Apr 19 10:34 runtime_log
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc   1177600 Apr 19 10:34 result.tar.gz
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc      8826 Apr 19 10:34 runtime_log.err
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc       662 Apr 19 10:34 125430373297.diag
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc        26 Apr 19 10:46 wrapper_checkpoint.txt
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc      8192 Apr 19 10:46 boinc_mmap_file
[2026-04-19 10:46:40] -rw-r--r--. 1 boinc boinc     20752 Apr 19 10:46 stderr.txt
[2026-04-19 10:46:40] HITS file was successfully produced:
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc 187714475 Apr 19 10:32 shared/HITS.pool.root.1
[2026-04-19 10:46:40]  *** Contents of shared directory: ***
[2026-04-19 10:46:40] total 461808
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc 283310679 Apr 19 07:55 ATLAS.root_0
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc     15665 Apr 19 07:55 start_atlas.sh
[2026-04-19 10:46:40] -rw-r--r--. 2 boinc boinc    656939 Apr 19 07:55 input.tar.gz
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc 187714475 Apr 19 10:32 HITS.pool.root.1
[2026-04-19 10:46:40] -rw-------. 1 boinc boinc   1177600 Apr 19 10:34 result.tar.gz
10:46:41 (449710): run_atlas exited; CPU time 37062.048768
10:46:41 (449710): called boinc_finish(0)

</stderr_txt>
]]>

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