Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:01:45 (11047): wrapper (7.7.26015): starting
08:01:45 (11047): wrapper: running run_atlas (--nthreads 8)
[2026-04-18 08:01:45] Arguments: --nthreads 8
[2026-04-18 08:01:45] Threads: 8
[2026-04-18 08:01:45] Checking for CVMFS
[2026-04-18 08:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 08:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 08:01:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 08:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 08:01:45] 2.11.2.0 14438 3642 79288 158573 1 204 22861945 25165825 956 130560 0 757610 99.823 3359251 24590 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-18 08:01:45] CVMFS is ok
[2026-04-18 08:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 08:01:45] Checking for apptainer binary...
[2026-04-18 08:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 08:01:45] Running /usr/bin/apptainer --version
[2026-04-18 08:01:45] apptainer version 1.3.2-1.el7
[2026-04-18 08:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 08:01:47] cg-vwn439.simple-grid.lan
[2026-04-18 08:01:47] apptainer works
[2026-04-18 08:01:47] Set ATHENA_PROC_NUMBER=8
[2026-04-18 08:01:47] Set ATHENA_CORE_NUMBER=8
[2026-04-18 08:01:47] Starting ATLAS job with PandaID=7096460553
[2026-04-18 08:01:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 12:09:47]  *** The last 200 lines of the pilot log: ***
[2026-04-18 12:09:47] 2026-04-18 10:08:57,493 | INFO     | this job has now completed (state=finished)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,493 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,493 | INFO     | log transfer has been attempted: DONE
[2026-04-18 12:09:47] 2026-04-18 10:08:57,493 | INFO     | job 7096460553 has finished - writing final server update
[2026-04-18 12:09:47] 2026-04-18 10:08:57,493 | INFO     | total number of processed events: 400 (read)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,496 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7096460553/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,496 | INFO     | extracted standard info from prmon json
[2026-04-18 12:09:47] 2026-04-18 10:08:57,497 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 12:09:47] 2026-04-18 10:08:57,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 12:09:47] 2026-04-18 10:08:57,497 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 12:09:47] 2026-04-18 10:08:57,502 | INFO     | fitting pss+swap vs Time
[2026-04-18 12:09:47] 2026-04-18 10:08:57,503 | INFO     | sum of square deviations: 4394577280.5
[2026-04-18 12:09:47] 2026-04-18 10:08:57,505 | INFO     | sum of deviations: 30760770333.499966
[2026-04-18 12:09:47] 2026-04-18 10:08:57,506 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,506 | INFO     | mean y: 2497298.5661157025
[2026-04-18 12:09:47] 2026-04-18 10:08:57,506 | INFO     | intersect: 2497298.5661157025
[2026-04-18 12:09:47] 2026-04-18 10:08:57,506 | INFO     | chi2: 2.3246667881464673
[2026-04-18 12:09:47] 2026-04-18 10:08:57,507 | INFO     | sum of square deviations: 4127772278.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,509 | INFO     | sum of deviations: 46188976129.99999
[2026-04-18 12:09:47] 2026-04-18 10:08:57,509 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,509 | INFO     | mean y: 2505961.2616033754
[2026-04-18 12:09:47] 2026-04-18 10:08:57,509 | INFO     | intersect: 2505961.2616033754
[2026-04-18 12:09:47] 2026-04-18 10:08:57,510 | INFO     | chi2: 1.54463541102826
[2026-04-18 12:09:47] 2026-04-18 10:08:57,510 | INFO     | current chi2=1.54463541102826 (change=33.55454558458039 %)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,511 | INFO     | sum of square deviations: 3871990738.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,513 | INFO     | sum of deviations: 45079321653.00001
[2026-04-18 12:09:47] 2026-04-18 10:08:57,513 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,513 | INFO     | mean y: 2505299.577586207
[2026-04-18 12:09:47] 2026-04-18 10:08:57,513 | INFO     | intersect: 2505299.577586207
[2026-04-18 12:09:47] 2026-04-18 10:08:57,514 | INFO     | chi2: 1.5450746887847526
[2026-04-18 12:09:47] 2026-04-18 10:08:57,514 | INFO     | current chi2=1.5450746887847526 (change=-0.028438928264639795 %)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,514 | INFO     | right removable region: 231
[2026-04-18 12:09:47] 2026-04-18 10:08:57,514 | INFO     | sum of square deviations: 4127772278.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,517 | INFO     | sum of deviations: -8779210707.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,517 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,517 | INFO     | mean y: 2519701.130801688
[2026-04-18 12:09:47] 2026-04-18 10:08:57,517 | INFO     | intersect: 2519701.130801688
[2026-04-18 12:09:47] 2026-04-18 10:08:57,518 | INFO     | chi2: 0.8115201273607927
[2026-04-18 12:09:47] 2026-04-18 10:08:57,518 | INFO     | current chi2=0.8115201273607927 (change=65.09090543648003 %)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,518 | INFO     | sum of square deviations: 3871990738.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,520 | INFO     | sum of deviations: -8782881778.500004
[2026-04-18 12:09:47] 2026-04-18 10:08:57,521 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,521 | INFO     | mean y: 2519693.1853448274
[2026-04-18 12:09:47] 2026-04-18 10:08:57,521 | INFO     | intersect: 2519693.1853448274
[2026-04-18 12:09:47] 2026-04-18 10:08:57,521 | INFO     | chi2: 0.8001244382424069
[2026-04-18 12:09:47] 2026-04-18 10:08:57,521 | INFO     | current chi2=0.8001244382424069 (change=1.4042398622258014 %)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,522 | INFO     | left removable region: 10
[2026-04-18 12:09:47] 2026-04-18 10:08:57,522 | INFO     | sum of square deviations: 3346927870.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,524 | INFO     | sum of deviations: 6502798921.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,524 | INFO     | mean x (centered): 0.0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,524 | INFO     | mean y: 2529029.045248869
[2026-04-18 12:09:47] 2026-04-18 10:08:57,525 | INFO     | intersect: 2529029.045248869
[2026-04-18 12:09:47] 2026-04-18 10:08:57,525 | INFO     | chi2: 0.002071476455876809
[2026-04-18 12:09:47] 2026-04-18 10:08:57,525 | INFO     | current memory leak: 1.94 B/s (using 221 data points, chi2=0.00)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | ..............................
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | . Timing measurements:
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | . get job = 0 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | . initial setup = 7 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | . payload setup = 15 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,526 | INFO     | . stage-in = 0 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,527 | INFO     | . payload execution = 14765 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,527 | INFO     | . stage-out = 8 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,527 | INFO     | . log creation = 1 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,527 | INFO     | ..............................
[2026-04-18 12:09:47] 2026-04-18 10:08:57,884 | INFO     | 
[2026-04-18 12:09:47] 2026-04-18 10:08:57,884 | INFO     | job summary report
[2026-04-18 12:09:47] 2026-04-18 10:08:57,884 | INFO     | --------------------------------------------------
[2026-04-18 12:09:47] 2026-04-18 10:08:57,884 | INFO     | PanDA job id: 7096460553
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | task id: 49545114
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | errors: (none)
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | pilot state: finished 
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | transexitcode: 0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | exeerrorcode: 0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | exeerrordiag: 
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | exitcode: 0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,885 | INFO     | exitmsg: OK
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | cpuconsumptiontime: 57957 s
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | nevents: 400
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | neventsw: 0
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | pid: 19460
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | pgrp: 19460
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | corecount: 8
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | event service: False
[2026-04-18 12:09:47] 2026-04-18 10:08:57,886 | INFO     | sizes: {0: 2281848, 1: 2283422, 11: 2283450, 14784: 2314385, 14785: 2314384, 14794: 2323622, 14796: 2323760}
[2026-04-18 12:09:47] 2026-04-18 10:08:57,887 | INFO     | --------------------------------------------------
[2026-04-18 12:09:47] 2026-04-18 10:08:57,887 | INFO     | 
[2026-04-18 12:09:47] 2026-04-18 10:08:57,887 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-18 12:09:47] 2026-04-18 10:08:58,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,353 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 12:09:47] 2026-04-18 10:08:58,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 12:09:47] 2026-04-18 10:08:58,353 | INFO     | job 7096460553 has completed (purged errors)
[2026-04-18 12:09:47] 2026-04-18 10:08:58,353 | INFO     | overall cleanup function is called
[2026-04-18 12:09:47] 2026-04-18 10:08:59,368 | INFO     | --- collectZombieJob: --- 10, [19460]
[2026-04-18 12:09:47] 2026-04-18 10:08:59,368 | INFO     | zombie collector waiting for pid 19460
[2026-04-18 12:09:47] 2026-04-18 10:08:59,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 12:09:47] 2026-04-18 10:08:59,368 | INFO     | collected zombie processes
[2026-04-18 12:09:47] 2026-04-18 10:08:59,369 | INFO     | will attempt to kill all subprocesses of pid=19460
[2026-04-18 12:09:47] 2026-04-18 10:08:59,432 | INFO     | process IDs to be killed: [19460] (in reverse order)
[2026-04-18 12:09:47] 2026-04-18 10:08:59,964 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 12:09:47] 2026-04-18 10:08:59,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 12:09:47] 2026-04-18 10:08:59,966 | INFO     | did not find any defunct processes belonging to 19460
[2026-04-18 12:09:47] 2026-04-18 10:08:59,968 | INFO     | did not find any defunct processes belonging to 19460
[2026-04-18 12:09:47] 2026-04-18 10:08:59,968 | INFO     | Ready for new job
[2026-04-18 12:09:47] 2026-04-18 10:08:59,970 | INFO     | **************************************
[2026-04-18 12:09:47] 2026-04-18 10:08:59,970 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 12:09:47] 2026-04-18 10:08:59,970 | INFO     | **************************************
[2026-04-18 12:09:47] 2026-04-18 10:08:59,970 | INFO     | 
[2026-04-18 12:09:47] 2026-04-18 10:08:59,971 | INFO     | pilot is running in a VM
[2026-04-18 12:09:47] 2026-04-18 10:08:59,971 | INFO     | architecture information:
[2026-04-18 12:09:47] 2026-04-18 10:08:59,971 | INFO     | executing command: cat /etc/os-release
[2026-04-18 12:09:47] 2026-04-18 10:09:00,330 | INFO     | cat /etc/os-release:
[2026-04-18 12:09:47] NAME="CentOS Linux"
[2026-04-18 12:09:47] VERSION="7 (Core)"
[2026-04-18 12:09:47] ID="centos"
[2026-04-18 12:09:47] ID_LIKE="rhel fedora"
[2026-04-18 12:09:47] VERSION_ID="7"
[2026-04-18 12:09:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 12:09:47] ANSI_COLOR="0;31"
[2026-04-18 12:09:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 12:09:47] HOME_URL="https://www.centos.org/"
[2026-04-18 12:09:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 12:09:47] 
[2026-04-18 12:09:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 12:09:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 12:09:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 12:09:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 12:09:47] 
[2026-04-18 12:09:47] 2026-04-18 10:09:00,330 | INFO     | **************************************
[2026-04-18 12:09:47] 2026-04-18 10:09:00,834 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-18 12:09:47] 2026-04-18 10:09:01,020 | INFO     | sufficient remaining disk space (496618176512 B)
[2026-04-18 12:09:47] 2026-04-18 10:09:01,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 12:09:47] 2026-04-18 10:09:01,020 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 12:09:47] 2026-04-18 10:09:01,020 | INFO     | update_server=False
[2026-04-18 12:09:47] 2026-04-18 10:09:01,021 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 12:09:47] 2026-04-18 10:09:01,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:09:47] 2026-04-18 10:09:01,022 | INFO     | aborting loop
[2026-04-18 12:09:47] 2026-04-18 10:09:01,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 12:09:47] 2026-04-18 10:09:01,135 | INFO     | all job control threads have been joined
[2026-04-18 12:09:47] 2026-04-18 10:09:01,697 | INFO     | all data control threads have been joined
[2026-04-18 12:09:47] 2026-04-18 10:09:01,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 12:09:47] 2026-04-18 10:09:02,027 | INFO     | [job] retrieve thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,028 | INFO     | [job] job monitor thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,141 | INFO     | [job] control thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,231 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,318 | INFO     | [payload] failed_post thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,365 | INFO     | all payload control threads have been joined
[2026-04-18 12:09:47] 2026-04-18 10:09:02,407 | INFO     | [data] copytool_in thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,428 | INFO     | [job] validate thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,473 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:02,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 12:09:47] 2026-04-18 10:09:02,703 | INFO     | [data] control thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,029 | INFO     | [data] copytool_out thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,102 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,267 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,371 | INFO     | [payload] control thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,606 | INFO     | [payload] validate_post thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:03,677 | INFO     | [job] queue monitor thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:05,842 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 12:09:47] 2026-04-18 10:09:31,143 | INFO     | PID=15039 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 12:09:47] 2026-04-18 10:09:31,143 | INFO     | .. there are 2 such processes running
[2026-04-18 12:09:47] 2026-04-18 10:09:31,144 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 12:09:47] 2026-04-18 10:09:31,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 12:09:47] 2026-04-18 10:09:31,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 12:09:47] 2026-04-18 10:09:35,521 | INFO     | [monitor] cgroup control has ended
[2026-04-18 12:09:47] 2026-04-18 10:09:37,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742016489280)>', '<ExcThread(monitor, started 139740980438784)>']
[2026-04-18 12:09:47] 2026-04-18 10:09:37,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 12:09:47] 2026-04-18 10:09:37,181 | INFO     | [monitor] control thread has ended
[2026-04-18 12:09:47] 2026-04-18 10:09:42,045 | INFO     | all workflow threads have been joined
[2026-04-18 12:09:47] 2026-04-18 10:09:42,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 12:09:47] 2026-04-18 10:09:42,045 | INFO     | traces error code: 0
[2026-04-18 12:09:47] 2026-04-18 10:09:42,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 12:09:47] 2026-04-18 10:09:42,461 [wrapper] ==== pilot stdout END ====
[2026-04-18 12:09:47] 2026-04-18 10:09:42,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 12:09:47] 2026-04-18 10:09:42,642 [wrapper] pilotpid: 15039
[2026-04-18 12:09:47] 2026-04-18 10:09:42,732 [wrapper] Pilot exit status: 0
[2026-04-18 12:09:47] 2026-04-18 10:09:43,255 [wrapper] pandaids: 7096460553
[2026-04-18 12:09:47] 2026-04-18 10:09:44,574 [wrapper] cleanup supervisor_pilot 25287 15040
[2026-04-18 12:09:47] 2026-04-18 10:09:44,695 [wrapper] Test setup, not cleaning
[2026-04-18 12:09:47] 2026-04-18 10:09:44,824 [wrapper] apfmon messages muted
[2026-04-18 12:09:47] 2026-04-18 10:09:44,923 [wrapper] ==== wrapper stdout END ====
[2026-04-18 12:09:47] 2026-04-18 10:09:45,030 [wrapper] ==== wrapper stderr END ====
[2026-04-18 12:09:47]  *** Error codes and diagnostics ***
[2026-04-18 12:09:47]     "exeErrorCode": 0,
[2026-04-18 12:09:47]     "pilotErrorCode": 0,
[2026-04-18 12:09:47]  *** Listing of results directory ***
[2026-04-18 12:09:47] total 469276
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc    644190 Apr 18 07:07 pilot3.tar.gz
[2026-04-18 12:09:47] -rwx------. 1 boinc boinc     36322 Apr 18 07:24 runpilot2-wrapper.sh
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc      5094 Apr 18 07:34 queuedata.json
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc       100 Apr 18 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 12:09:47] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 08:01 run_atlas
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc       105 Apr 18 08:01 job.xml
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc      6307 Apr 18 08:01 init_data.xml
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc 283634126 Apr 18 08:01 EVNT.49539591._000010.pool.root.1
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:01 start_atlas.sh
[2026-04-18 12:09:47] drwxrwx--x. 2 boinc boinc        68 Apr 18 08:01 shared
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc    656942 Apr 18 08:01 input.tar.gz
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc         0 Apr 18 08:01 boinc_lockfile
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc      2601 Apr 18 08:01 pandaJob.out
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc    997901 Apr 18 08:02 agis_schedconf.cvmfs.json
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc       415 Apr 18 08:02 workernode_map.json
[2026-04-18 12:09:47] drwx------. 5 boinc boinc      4096 Apr 18 08:02 pilot3
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc 189334524 Apr 18 12:07 HITS.49545114._019799.pool.root.1
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc       488 Apr 18 12:07 boinc_task_state.xml
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc      1011 Apr 18 12:08 memory_monitor_summary.json
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc   1512404 Apr 18 12:08 agis_ddmendpoints.agis.ALL.json
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc    391346 Apr 18 12:08 log.49545114._019799.job.log.tgz.1
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc      6321 Apr 18 12:08 heartbeat_new.json
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc      6212 Apr 18 12:08 heartbeat.json
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc      8192 Apr 18 12:09 boinc_mmap_file
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc        28 Apr 18 12:09 wrapper_checkpoint.txt
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc        95 Apr 18 12:09 pilot_heartbeat.json
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc      4879 Apr 18 12:09 pilotlog.txt
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc   1368667 Apr 18 12:09 log.49545114._019799.job.log.1
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc       357 Apr 18 12:09 output.list
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc       410 Apr 18 12:09 runtime_log
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc   1781760 Apr 18 12:09 result.tar.gz
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc      8438 Apr 18 12:09 runtime_log.err
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc       655 Apr 18 12:09 157c133c4499.diag
[2026-04-18 12:09:47] -rw-r--r--. 1 boinc boinc     20621 Apr 18 12:09 stderr.txt
[2026-04-18 12:09:47] HITS file was successfully produced:
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc 189334524 Apr 18 12:07 shared/HITS.pool.root.1
[2026-04-18 12:09:47]  *** Contents of shared directory: ***
[2026-04-18 12:09:47] total 464288
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc 283634126 Apr 18 08:01 ATLAS.root_0
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc     15665 Apr 18 08:01 start_atlas.sh
[2026-04-18 12:09:47] -rw-r--r--. 2 boinc boinc    656942 Apr 18 08:01 input.tar.gz
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc 189334524 Apr 18 12:07 HITS.pool.root.1
[2026-04-18 12:09:47] -rw-------. 1 boinc boinc   1781760 Apr 18 12:09 result.tar.gz
12:09:48 (11047): run_atlas exited; CPU time 58103.619650
12:09:48 (11047): called boinc_finish(0)

</stderr_txt>
]]>

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