Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:31:33 (334962): wrapper (7.7.26015): starting
08:31:33 (334962): wrapper: running run_atlas (--nthreads 3)
[2026-04-18 08:31:33] Arguments: --nthreads 3
[2026-04-18 08:31:33] Threads: 3
[2026-04-18 08:31:33] Checking for CVMFS
[2026-04-18 08:31:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 08:31:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 08:31:33] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 08:31:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 08:31:33] 2.9.2.0 296447 170 52344 158575 2 50 11220841 36864000 0 130560 0 109936 99.966 13385 11669 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-18 08:31:33] CVMFS is ok
[2026-04-18 08:31:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 08:31:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 08:31:33] Further information can be found at the LHC@home message board.
[2026-04-18 08:31:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 08:31:33] Checking for apptainer binary...
[2026-04-18 08:31:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 08:31:33] Running /usr/bin/apptainer --version
[2026-04-18 08:31:33] apptainer version 1.4.1-1.1
[2026-04-18 08:31:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 08:31:34] belleA259
[2026-04-18 08:31:34] apptainer works
[2026-04-18 08:31:34] Set ATHENA_PROC_NUMBER=3
[2026-04-18 08:31:34] Set ATHENA_CORE_NUMBER=3
[2026-04-18 08:31:34] Starting ATLAS job with PandaID=7093053485
[2026-04-18 08:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 09:55:01]  *** The last 200 lines of the pilot log: ***
[2026-04-18 09:55:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 09:55:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 09:55:01] 
[2026-04-18 09:55:01] 2026-04-18 07:54:29,964 | INFO     | **************************************
[2026-04-18 09:55:01] 2026-04-18 07:54:30,467 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 09:55:01] 2026-04-18 07:54:30,480 | INFO     | sufficient remaining disk space (350714068992 B)
[2026-04-18 09:55:01] 2026-04-18 07:54:30,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 09:55:01] 2026-04-18 07:54:30,480 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 09:55:01] 2026-04-18 07:54:30,480 | INFO     | update_server=False
[2026-04-18 09:55:01] 2026-04-18 07:54:30,481 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 09:55:01] 2026-04-18 07:54:30,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 09:55:01] 2026-04-18 07:54:30,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 09:55:01] 2026-04-18 07:54:30,540 | INFO     | all job control threads have been joined
[2026-04-18 09:55:01] 2026-04-18 07:54:30,949 | INFO     | all payload control threads have been joined
[2026-04-18 09:55:01] 2026-04-18 07:54:31,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 09:55:01] 2026-04-18 07:54:31,282 | INFO     | all data control threads have been joined
[2026-04-18 09:55:01] 2026-04-18 07:54:31,486 | INFO     | [job] retrieve thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,486 | INFO     | [job] queue monitor thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,505 | INFO     | [data] copytool_in thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,546 | INFO     | [job] control thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,558 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,780 | INFO     | [payload] validate_post thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:31,955 | INFO     | [payload] control thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:32,288 | INFO     | [data] control thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:32,617 | INFO     | [payload] failed_post thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:32,791 | INFO     | [job] validate thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:32,810 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:32,827 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:33,232 | INFO     | [data] copytool_out thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:34,076 | WARNING  | process 343452 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 09:55:01] 2026-04-18 07:54:34,113 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 09:55:01] 2026-04-18 07:54:34,113 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 09:55:01] 2026-04-18 07:54:34,113 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-18 09:55:01] 2026-04-18 07:54:34,113 | WARNING  | maxPSS not found in memory monitor output
[2026-04-18 09:55:01] 2026-04-18 07:54:34,113 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7093053485/payload.stdout) since it has not been created yet
[2026-04-18 09:55:01] 2026-04-18 07:54:34,114 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 09:55:01] 2026-04-18 07:54:34,123 | INFO     | sufficient remaining disk space (350714068992 B)
[2026-04-18 09:55:01] 2026-04-18 07:54:34,124 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-18 09:55:01] 2026-04-18 07:54:34,124 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7093053485/HITS.49545114._014386.pool.root.1 since it does not exist
[2026-04-18 09:55:01] 2026-04-18 07:54:34,174 | INFO     | number of running child processes to parent process 343452: 1
[2026-04-18 09:55:01] 2026-04-18 07:54:34,174 | INFO     | maximum number of monitored processes: 6
[2026-04-18 09:55:01] 2026-04-18 07:54:34,174 | INFO     | aborting job monitoring since job object (job id=7093053485) has expired
[2026-04-18 09:55:01] 2026-04-18 07:54:34,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 09:55:01] 2026-04-18 07:54:34,174 | INFO     | will abort loop
[2026-04-18 09:55:01] 2026-04-18 07:54:34,488 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:35,180 | INFO     | [job] job monitor thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:41,462 | INFO     | job.realtimelogging is not enabled
[2026-04-18 09:55:01] 2026-04-18 07:54:42,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 09:55:01] 2026-04-18 07:54:49,187 | INFO     | [monitor] cgroup control has ended
[2026-04-18 09:55:01] 2026-04-18 07:54:50,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140469944805184)>', '<ExcThread(monitor, started 140469304547072)>']
[2026-04-18 09:55:01] 2026-04-18 07:54:55,614 | INFO     | all workflow threads have been joined
[2026-04-18 09:55:01] 2026-04-18 07:54:55,614 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 09:55:01] 2026-04-18 07:54:55,614 | INFO     | traces error code: 0
[2026-04-18 09:55:01] 2026-04-18 07:54:55,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | INFO     | PID=339007 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 09:55:01] 2026-04-18 07:55:01,558 | INFO     | [monitor] control thread has ended
[2026-04-18 09:55:01] 2026-04-18 07:55:01,604 [wrapper] ==== pilot stdout END ====
[2026-04-18 09:55:01] 2026-04-18 07:55:01,607 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 09:55:01] 2026-04-18 07:55:01,609 [wrapper] pilotpid: 339007
[2026-04-18 09:55:01] 2026-04-18 07:55:01,611 [wrapper] Pilot exit status: 0
[2026-04-18 09:55:01] 2026-04-18 07:55:01,618 [wrapper] pandaids: 7093053485
[2026-04-18 09:55:01] 2026-04-18 07:55:01,636 [wrapper] cleanup supervisor_pilot  354444 339008
[2026-04-18 09:55:01] 2026-04-18 07:55:01,638 [wrapper] Test setup, not cleaning
[2026-04-18 09:55:01] 2026-04-18 07:55:01,641 [wrapper] apfmon messages muted
[2026-04-18 09:55:01] 2026-04-18 07:55:01,643 [wrapper] ==== wrapper stdout END ====
[2026-04-18 09:55:01] 2026-04-18 07:55:01,645 [wrapper] ==== wrapper stderr END ====
[2026-04-18 09:55:01]  *** Error codes and diagnostics ***
[2026-04-18 09:55:01]     "exeErrorCode": 0,
[2026-04-18 09:55:01]     "pilotErrorCode": 0,
[2026-04-18 09:55:01]  *** Listing of results directory ***
[2026-04-18 09:55:01] total 457320
[2026-04-18 09:55:01] -rwx------ 1 boinc boinc     36322 Apr 16 18:04 runpilot2-wrapper.sh
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc    644190 Apr 17 10:44 pilot3.tar.gz
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      5094 Apr 18 05:21 queuedata.json
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc       100 Apr 18 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 09:55:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 08:31 run_atlas
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc       105 Apr 18 08:31 job.xml
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc 278038041 Apr 18 08:31 EVNT.49539591._000579.pool.root.1
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc    656929 Apr 18 08:31 input.tar.gz
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc     15665 Apr 18 08:31 start_atlas.sh
[2026-04-18 09:55:01] drwxrwx--x 2 boinc boinc      4096 Apr 18 08:31 shared
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc         0 Apr 18 08:31 boinc_setup_complete
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      6362 Apr 18 08:31 init_data.xml
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc         0 Apr 18 08:31 boinc_lockfile
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      2605 Apr 18 08:31 pandaJob.out
[2026-04-18 09:55:01] -rw------- 1 boinc boinc    997901 Apr 18 08:31 agis_schedconf.cvmfs.json
[2026-04-18 09:55:01] -rw------- 1 boinc boinc   1512404 Apr 18 08:31 agis_ddmendpoints.agis.ALL.json
[2026-04-18 09:55:01] -rw------- 1 boinc boinc       426 Apr 18 08:31 workernode_map.json
[2026-04-18 09:55:01] drwx------ 5 boinc boinc      4096 Apr 18 08:31 pilot3
[2026-04-18 09:55:01] -rw------- 1 boinc boinc        95 Apr 18 09:54 pilot_heartbeat.json
[2026-04-18 09:55:01] -rw------- 1 boinc boinc 184788563 Apr 18 09:54 HITS.49545114._014386.pool.root.1
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc       487 Apr 18 09:54 boinc_task_state.xml
[2026-04-18 09:55:01] -rw------- 1 boinc boinc      1013 Apr 18 09:54 memory_monitor_summary.json
[2026-04-18 09:55:01] -rw------- 1 boinc boinc    227759 Apr 18 09:54 log.49545114._014386.job.log.tgz.1
[2026-04-18 09:55:01] -rw------- 1 boinc boinc      6321 Apr 18 09:54 heartbeat_new.json
[2026-04-18 09:55:01] -rw------- 1 boinc boinc      6212 Apr 18 09:54 heartbeat.json
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      8192 Apr 18 09:54 boinc_mmap_file
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc        27 Apr 18 09:54 wrapper_checkpoint.txt
[2026-04-18 09:55:01] -rw------- 1 boinc boinc       746 Apr 18 09:55 pilotlog.txt
[2026-04-18 09:55:01] -rw------- 1 boinc boinc    485370 Apr 18 09:55 log.49545114._014386.job.log.1
[2026-04-18 09:55:01] -rw------- 1 boinc boinc       357 Apr 18 09:55 output.list
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc       410 Apr 18 09:55 runtime_log
[2026-04-18 09:55:01] -rw------- 1 boinc boinc    727040 Apr 18 09:55 result.tar.gz
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      8533 Apr 18 09:55 runtime_log.err
[2026-04-18 09:55:01] -rw------- 1 boinc boinc       660 Apr 18 09:55 089355d14076.diag
[2026-04-18 09:55:01] -rw-r--r-- 1 boinc boinc      9875 Apr 18 09:55 stderr.txt
[2026-04-18 09:55:01] HITS file was successfully produced:
[2026-04-18 09:55:01] -rw------- 1 boinc boinc 184788563 Apr 18 09:54 shared/HITS.pool.root.1
[2026-04-18 09:55:01]  *** Contents of shared directory: ***
[2026-04-18 09:55:01] total 453364
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc 278038041 Apr 18 08:31 ATLAS.root_0
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc    656929 Apr 18 08:31 input.tar.gz
[2026-04-18 09:55:01] -rw-r--r-- 2 boinc boinc     15665 Apr 18 08:31 start_atlas.sh
[2026-04-18 09:55:01] -rw------- 1 boinc boinc 184788563 Apr 18 09:54 HITS.pool.root.1
[2026-04-18 09:55:01] -rw------- 1 boinc boinc    727040 Apr 18 09:55 result.tar.gz
09:55:02 (334962): run_atlas exited; CPU time 14000.744628
09:55:02 (334962): called boinc_finish(0)

</stderr_txt>
]]>

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