Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:36 (2620504): wrapper (7.7.26015): starting
14:47:36 (2620504): wrapper: running run_atlas (--nthreads 4)
[2026-04-18 14:47:36] Arguments: --nthreads 4
[2026-04-18 14:47:36] Threads: 4
[2026-04-18 14:47:36] Checking for CVMFS
[2026-04-18 14:47:36] No cvmfs_config command found, will try listing directly
[2026-04-18 14:47:36] CVMFS is ok
[2026-04-18 14:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 14:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 14:47:36] Further information can be found at the LHC@home message board.
[2026-04-18 14:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 14:47:36] Checking for apptainer binary...
[2026-04-18 14:47:36] which: no apptainer in ((null))
[2026-04-18 14:47:36] apptainer is not installed, using version from CVMFS
[2026-04-18 14:47:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 14:47:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/7/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-18 14:47:36] apptainer works
[2026-04-18 14:47:36] Set ATHENA_PROC_NUMBER=4
[2026-04-18 14:47:36] Set ATHENA_CORE_NUMBER=4
[2026-04-18 14:47:36] Starting ATLAS job with PandaID=7093112235
[2026-04-18 14:47:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 17:43:16]  *** The last 200 lines of the pilot log: ***
[2026-04-18 17:43:16] 2026-04-18 15:41:25,992 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot124/slots/7/workernode_map.json
[2026-04-18 17:43:16] 2026-04-18 15:41:25,992 | INFO     | this job has now completed (state=finished)
[2026-04-18 17:43:16] 2026-04-18 15:41:25,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 17:43:16] 2026-04-18 15:41:25,993 | INFO     | log transfer has been attempted: DONE
[2026-04-18 17:43:16] 2026-04-18 15:41:25,993 | INFO     | job 7093112235 has finished - writing final server update
[2026-04-18 17:43:16] 2026-04-18 15:41:25,993 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_11194/.job.ad'
[2026-04-18 17:43:16] 2026-04-18 15:41:25,994 | INFO     | total number of processed events: 400 (read)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,036 | INFO     | using path: /var/lib/boinc/var/slot124/slots/7/PanDA_Pilot-7093112235/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,037 | INFO     | extracted standard info from prmon json
[2026-04-18 17:43:16] 2026-04-18 15:41:26,037 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 17:43:16] 2026-04-18 15:41:26,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 17:43:16] 2026-04-18 15:41:26,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 17:43:16] 2026-04-18 15:41:26,042 | INFO     | fitting pss+swap vs Time
[2026-04-18 17:43:16] 2026-04-18 15:41:26,043 | INFO     | sum of square deviations: 1523386702.5
[2026-04-18 17:43:16] 2026-04-18 15:41:26,044 | INFO     | sum of deviations: 17262854972.500004
[2026-04-18 17:43:16] 2026-04-18 15:41:26,044 | INFO     | mean x (centered): 0.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,044 | INFO     | mean y: 2336275.394117647
[2026-04-18 17:43:16] 2026-04-18 15:41:26,044 | INFO     | intersect: 2336275.394117647
[2026-04-18 17:43:16] 2026-04-18 15:41:26,045 | INFO     | chi2: 1.4157523774762142
[2026-04-18 17:43:16] 2026-04-18 15:41:26,045 | INFO     | sum of square deviations: 1392881930.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | sum of deviations: 16650510284.999998
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | mean x (centered): 0.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | mean y: 2335559.6424242426
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | intersect: 2335559.6424242426
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | chi2: 1.4170264824201164
[2026-04-18 17:43:16] 2026-04-18 15:41:26,047 | INFO     | current chi2=1.4170264824201164 (change=-0.08999490053292447 %)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,048 | INFO     | right removable region: 164
[2026-04-18 17:43:16] 2026-04-18 15:41:26,048 | INFO     | sum of square deviations: 1392881930.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | sum of deviations: -5875129783.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | mean x (centered): 0.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | mean y: 2362927.654545455
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | intersect: 2362927.654545455
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | chi2: 0.017235234424558765
[2026-04-18 17:43:16] 2026-04-18 15:41:26,050 | INFO     | current chi2=0.017235234424558765 (change=98.78260953689633 %)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,051 | INFO     | sum of square deviations: 1270051720.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,052 | INFO     | sum of deviations: -5176625828.5
[2026-04-18 17:43:16] 2026-04-18 15:41:26,052 | INFO     | mean x (centered): 0.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,052 | INFO     | mean y: 2362053.85625
[2026-04-18 17:43:16] 2026-04-18 15:41:26,052 | INFO     | intersect: 2362053.85625
[2026-04-18 17:43:16] 2026-04-18 15:41:26,053 | INFO     | chi2: 0.017035858674902603
[2026-04-18 17:43:16] 2026-04-18 15:41:26,053 | INFO     | current chi2=0.017035858674902603 (change=1.1567916324483987 %)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,053 | INFO     | left removable region: 10
[2026-04-18 17:43:16] 2026-04-18 15:41:26,053 | INFO     | sum of square deviations: 1132458442.5
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | sum of deviations: -5113378100.500002
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | mean x (centered): 0.0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | mean y: 2362138.0194805195
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | intersect: 2362138.0194805195
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | chi2: 0.01666912857045246
[2026-04-18 17:43:16] 2026-04-18 15:41:26,055 | INFO     | current memory leak: -4.52 B/s (using 154 data points, chi2=0.02)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,056 | INFO     | could have reported an average CPU frequency of 2665 MHz (9 samples)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,056 | INFO     | ..............................
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . Timing measurements:
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . get job = 0 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . initial setup = 9 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . payload setup = 16 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . stage-in = 0 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . payload execution = 10366 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . stage-out = 1 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | . log creation = 0 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,057 | INFO     | ..............................
[2026-04-18 17:43:16] 2026-04-18 15:41:26,643 | INFO     | number of running child processes to parent process 2630153: 1
[2026-04-18 17:43:16] 2026-04-18 15:41:26,643 | INFO     | maximum number of monitored processes: 6
[2026-04-18 17:43:16] 2026-04-18 15:41:26,644 | INFO     | aborting job monitoring since job object (job id=7093112235) has expired
[2026-04-18 17:43:16] 2026-04-18 15:41:26,682 | INFO     | 
[2026-04-18 17:43:16] 2026-04-18 15:41:26,682 | INFO     | job summary report
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | --------------------------------------------------
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | PanDA job id: 7093112235
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | task id: 49545114
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | errors: (none)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | pilot state: finished 
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | transexitcode: 0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | exeerrorcode: 0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,683 | INFO     | exeerrordiag: 
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | exitcode: 0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | exitmsg: OK
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | cpuconsumptiontime: 39231 s
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | nevents: 400
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | neventsw: 0
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | pid: 2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | pgrp: 2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | corecount: 4
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | event service: False
[2026-04-18 17:43:16] 2026-04-18 15:41:26,684 | INFO     | sizes: {0: 2281918, 1: 2283492, 11: 2283520, 10387: 2312766, 10389: 2321788, 10391: 2321844, 10392: 2322230}
[2026-04-18 17:43:16] 2026-04-18 15:41:26,685 | INFO     | --------------------------------------------------
[2026-04-18 17:43:16] 2026-04-18 15:41:26,685 | INFO     | 
[2026-04-18 17:43:16] 2026-04-18 15:41:26,685 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/7
[2026-04-18 17:43:16] 2026-04-18 15:41:26,727 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,727 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 17:43:16] 2026-04-18 15:41:26,730 | INFO     | job 7093112235 has completed (purged errors)
[2026-04-18 17:43:16] 2026-04-18 15:41:26,731 | INFO     | overall cleanup function is called
[2026-04-18 17:43:16] 2026-04-18 15:41:27,391 | INFO     | PID=2624881 has CPU usage=34.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-18 17:43:16] 2026-04-18 15:41:27,391 | INFO     | .. there are 21 such processes running
[2026-04-18 17:43:16] 2026-04-18 15:41:27,742 | INFO     | --- collectZombieJob: --- 10, [2630153]
[2026-04-18 17:43:16] 2026-04-18 15:41:27,742 | INFO     | zombie collector waiting for pid 2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:27,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 17:43:16] 2026-04-18 15:41:27,743 | INFO     | collected zombie processes
[2026-04-18 17:43:16] 2026-04-18 15:41:27,743 | INFO     | will attempt to kill all subprocesses of pid=2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:28,879 | INFO     | process IDs to be killed: [2630153] (in reverse order)
[2026-04-18 17:43:16] 2026-04-18 15:41:29,294 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 17:43:16] 2026-04-18 15:41:29,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 17:43:16] 2026-04-18 15:41:29,337 | INFO     | did not find any defunct processes belonging to 2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:29,373 | INFO     | did not find any defunct processes belonging to 2630153
[2026-04-18 17:43:16] 2026-04-18 15:41:29,373 | INFO     | Ready for new job
[2026-04-18 17:43:16] 2026-04-18 15:41:29,376 | INFO     | **************************************
[2026-04-18 17:43:16] 2026-04-18 15:41:29,377 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 17:43:16] 2026-04-18 15:41:29,377 | INFO     | **************************************
[2026-04-18 17:43:16] 2026-04-18 15:41:29,377 | INFO     | 
[2026-04-18 17:43:16] 2026-04-18 15:41:29,388 | INFO     | architecture information:
[2026-04-18 17:43:16] 2026-04-18 15:41:29,389 | INFO     | executing command: cat /etc/os-release
[2026-04-18 17:43:16] 2026-04-18 15:41:29,419 | INFO     | cat /etc/os-release:
[2026-04-18 17:43:16] NAME="CentOS Linux"
[2026-04-18 17:43:16] VERSION="7 (Core)"
[2026-04-18 17:43:16] ID="centos"
[2026-04-18 17:43:16] ID_LIKE="rhel fedora"
[2026-04-18 17:43:16] VERSION_ID="7"
[2026-04-18 17:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 17:43:16] ANSI_COLOR="0;31"
[2026-04-18 17:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 17:43:16] HOME_URL="https://www.centos.org/"
[2026-04-18 17:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 17:43:16] 
[2026-04-18 17:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 17:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 17:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 17:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 17:43:16] 
[2026-04-18 17:43:16] 2026-04-18 15:41:29,420 | INFO     | **************************************
[2026-04-18 17:43:16] 2026-04-18 15:41:29,923 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/7
[2026-04-18 17:43:16] 2026-04-18 15:41:29,954 | INFO     | sufficient remaining disk space (226999926784 B)
[2026-04-18 17:43:16] 2026-04-18 15:41:29,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 17:43:16] 2026-04-18 15:41:29,955 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 17:43:16] 2026-04-18 15:41:29,955 | INFO     | update_server=False
[2026-04-18 17:43:16] 2026-04-18 15:41:29,955 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 17:43:16] 2026-04-18 15:41:30,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:43:16] 2026-04-18 15:41:30,152 | INFO     | aborting loop
[2026-04-18 17:43:16] 2026-04-18 15:41:30,280 | INFO     | all data control threads have been joined
[2026-04-18 17:43:16] 2026-04-18 15:41:30,525 | INFO     | all payload control threads have been joined
[2026-04-18 17:43:16] 2026-04-18 15:41:30,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 17:43:16] 2026-04-18 15:41:30,770 | INFO     | all job control threads have been joined
[2026-04-18 17:43:16] 2026-04-18 15:41:30,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 17:43:16] 2026-04-18 15:41:30,960 | INFO     | [job] retrieve thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,133 | INFO     | [data] copytool_in thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,156 | INFO     | [job] job monitor thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 17:43:16] 2026-04-18 15:41:31,238 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,285 | INFO     | [data] control thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,373 | INFO     | [payload] validate_post thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,419 | INFO     | [payload] failed_post thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,530 | INFO     | [payload] control thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:31,775 | INFO     | [job] control thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:32,185 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:32,214 | INFO     | [job] queue monitor thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:32,218 | INFO     | [job] validate thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:32,395 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:32,887 | INFO     | [data] copytool_out thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:34,670 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:41:40,427 | INFO     | job.realtimelogging is not enabled
[2026-04-18 17:43:16] 2026-04-18 15:41:41,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 17:43:16] 2026-04-18 15:42:00,843 | INFO     | PID=2624881 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 17:43:16] 2026-04-18 15:42:00,843 | INFO     | .. there are 21 such processes running
[2026-04-18 17:43:16] 2026-04-18 15:42:00,845 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 17:43:16] 2026-04-18 15:42:00,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 17:43:16] 2026-04-18 15:42:00,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 17:43:16] 2026-04-18 15:42:19,264 | INFO     | [monitor] cgroup control has ended
[2026-04-18 17:43:16] 2026-04-18 15:42:21,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23256972904256)>', '<ExcThread(monitor, started 23256735430400)>']
[2026-04-18 17:43:16] 2026-04-18 15:42:21,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 17:43:16] 2026-04-18 15:42:21,951 | INFO     | [monitor] control thread has ended
[2026-04-18 17:43:16] 2026-04-18 15:42:26,054 | INFO     | all workflow threads have been joined
[2026-04-18 17:43:16] 2026-04-18 15:42:26,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 17:43:16] 2026-04-18 15:42:26,055 | INFO     | traces error code: 0
[2026-04-18 17:43:16] 2026-04-18 15:42:26,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 17:43:16] 2026-04-18 15:42:26,233 [wrapper] ==== pilot stdout END ====
[2026-04-18 17:43:16] 2026-04-18 15:42:26,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 17:43:16] 2026-04-18 15:42:26,243 [wrapper] pilotpid: 2624881
[2026-04-18 17:43:16] 2026-04-18 15:42:26,248 [wrapper] Pilot exit status: 0
[2026-04-18 17:43:16] 2026-04-18 15:42:26,270 [wrapper] pandaids: 7093112235
[2026-04-18 17:43:16] 2026-04-18 15:42:26,546 [wrapper] cleanup supervisor_pilot 3036482 2624882
[2026-04-18 17:43:16] 2026-04-18 15:42:26,552 [wrapper] Test setup, not cleaning
[2026-04-18 17:43:16] 2026-04-18 15:42:26,558 [wrapper] apfmon messages muted
[2026-04-18 17:43:16] 2026-04-18 15:42:26,563 [wrapper] ==== wrapper stdout END ====
[2026-04-18 17:43:16] 2026-04-18 15:42:26,569 [wrapper] ==== wrapper stderr END ====
[2026-04-18 17:43:16]  *** Error codes and diagnostics ***
[2026-04-18 17:43:16]     "exeErrorCode": 0,
[2026-04-18 17:43:16]     "pilotErrorCode": 0,
[2026-04-18 17:43:16]  *** Listing of results directory ***
[2026-04-18 17:43:16] total 468684
[2026-04-18 17:43:16] -rwx------. 1 boinc boinc     36322 Apr 16 18:04 runpilot2-wrapper.sh
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc    644190 Apr 17 10:44 pilot3.tar.gz
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc      5094 Apr 18 05:19 queuedata.json
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc       100 Apr 18 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 17:43:16] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 14:47 run_atlas
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc       105 Apr 18 14:47 job.xml
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc      6612 Apr 18 14:47 init_data.xml
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc 282341732 Apr 18 14:47 EVNT.49539591._000571.pool.root.1
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc     15665 Apr 18 14:47 start_atlas.sh
[2026-04-18 17:43:16] drwxrwx--x. 2 boinc boinc      4096 Apr 18 14:47 shared
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc    656932 Apr 18 14:47 input.tar.gz
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc         0 Apr 18 14:47 boinc_lockfile
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc      2605 Apr 18 14:47 pandaJob.out
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc    997965 Apr 18 14:47 agis_schedconf.cvmfs.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc   1512404 Apr 18 14:47 agis_ddmendpoints.agis.ALL.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc       444 Apr 18 14:48 workernode_map.json
[2026-04-18 17:43:16] drwx------. 5 boinc boinc      4096 Apr 18 14:48 pilot3
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc 191002821 Apr 18 17:40 HITS.49545114._014542.pool.root.1
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc       486 Apr 18 17:40 boinc_task_state.xml
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc      1029 Apr 18 17:41 memory_monitor_summary.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc    304578 Apr 18 17:41 log.49545114._014542.job.log.tgz.1
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc      6375 Apr 18 17:41 heartbeat_new.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc      6266 Apr 18 17:41 heartbeat.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc        95 Apr 18 17:42 pilot_heartbeat.json
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc      4902 Apr 18 17:42 pilotlog.txt
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc    954800 Apr 18 17:42 log.49545114._014542.job.log.1
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc       357 Apr 18 17:42 output.list
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc       410 Apr 18 17:42 runtime_log
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc   1280000 Apr 18 17:42 result.tar.gz
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc      8844 Apr 18 17:42 runtime_log.err
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc       666 Apr 18 17:42 08a439f6a3c4.diag
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc        26 Apr 18 17:43 wrapper_checkpoint.txt
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc      8192 Apr 18 17:43 boinc_mmap_file
[2026-04-18 17:43:16] -rw-r--r--. 1 boinc boinc     21099 Apr 18 17:43 stderr.txt
[2026-04-18 17:43:16] HITS file was successfully produced:
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc 191002821 Apr 18 17:40 shared/HITS.pool.root.1
[2026-04-18 17:43:16]  *** Contents of shared directory: ***
[2026-04-18 17:43:16] total 464176
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc 282341732 Apr 18 14:47 ATLAS.root_0
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc     15665 Apr 18 14:47 start_atlas.sh
[2026-04-18 17:43:16] -rw-r--r--. 2 boinc boinc    656932 Apr 18 14:47 input.tar.gz
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc 191002821 Apr 18 17:40 HITS.pool.root.1
[2026-04-18 17:43:16] -rw-------. 1 boinc boinc   1280000 Apr 18 17:42 result.tar.gz
17:43:17 (2620504): run_atlas exited; CPU time 39931.599729
17:43:17 (2620504): called boinc_finish(0)

</stderr_txt>
]]>

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