Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:29:00 (5238): wrapper (7.7.26015): starting
05:29:00 (5238): wrapper: running run_atlas (--nthreads 4)
[2026-04-18 05:29:00] Arguments: --nthreads 4
[2026-04-18 05:29:00] Threads: 4
[2026-04-18 05:29:00] Checking for CVMFS
[2026-04-18 05:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 05:31:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 05:31:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 05:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 05:31:05] 2.12.7.0 5462 2 25124 158572 2 1 3274144 4194305 0 130560 0 0 0.000 1282 34 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-04-18 05:31:05] CVMFS is ok
[2026-04-18 05:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 05:31:05] Checking for apptainer binary...
[2026-04-18 05:31:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 05:31:05] Running /usr/bin/apptainer --version
[2026-04-18 05:31:05] apptainer version 1.0.3
[2026-04-18 05:31:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 05:31:05] TeeC03
[2026-04-18 05:31:05] apptainer works
[2026-04-18 05:31:05] Set ATHENA_PROC_NUMBER=4
[2026-04-18 05:31:05] Set ATHENA_CORE_NUMBER=4
[2026-04-18 05:31:05] Starting ATLAS job with PandaID=7097910228
[2026-04-18 05:31:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 10:33:41]  *** The last 200 lines of the pilot log: ***
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/0/workernode_map.json
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | this job has now completed (state=finished)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | log transfer has been attempted: DONE
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | job 7097910228 has finished - writing final server update
[2026-04-18 10:33:41] 2026-04-18 09:32:43,410 | INFO     | total number of processed events: 400 (read)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,430 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7097910228/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,431 | INFO     | extracted standard info from prmon json
[2026-04-18 10:33:41] 2026-04-18 09:32:43,431 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 10:33:41] 2026-04-18 09:32:43,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 10:33:41] 2026-04-18 09:32:43,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 10:33:41] 2026-04-18 09:32:43,434 | INFO     | fitting pss+swap vs Time
[2026-04-18 10:33:41] 2026-04-18 09:32:43,434 | INFO     | sum of square deviations: 8049332843.834477
[2026-04-18 10:33:41] 2026-04-18 09:32:43,435 | INFO     | sum of deviations: -96020751858.5135
[2026-04-18 10:33:41] 2026-04-18 09:32:43,435 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,436 | INFO     | mean y: 2413030.2162162163
[2026-04-18 10:33:41] 2026-04-18 09:32:43,436 | INFO     | intersect: 2413030.2162162163
[2026-04-18 10:33:41] 2026-04-18 09:32:43,436 | INFO     | chi2: 2.960789421282206
[2026-04-18 10:33:41] 2026-04-18 09:32:43,436 | INFO     | sum of square deviations: 7648206172.886589
[2026-04-18 10:33:41] 2026-04-18 09:32:43,437 | INFO     | sum of deviations: -73117632206.54642
[2026-04-18 10:33:41] 2026-04-18 09:32:43,437 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,438 | INFO     | mean y: 2421632.2474226803
[2026-04-18 10:33:41] 2026-04-18 09:32:43,438 | INFO     | intersect: 2421632.2474226803
[2026-04-18 10:33:41] 2026-04-18 09:32:43,438 | INFO     | chi2: 1.9623786086737078
[2026-04-18 10:33:41] 2026-04-18 09:32:43,438 | INFO     | current chi2=1.9623786086737078 (change=33.7211017248273 %)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,438 | INFO     | sum of square deviations: 7260614635.034948
[2026-04-18 10:33:41] 2026-04-18 09:32:43,439 | INFO     | sum of deviations: -71729328528.41248
[2026-04-18 10:33:41] 2026-04-18 09:32:43,439 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,439 | INFO     | mean y: 2422178.874125874
[2026-04-18 10:33:41] 2026-04-18 09:32:43,440 | INFO     | intersect: 2422178.874125874
[2026-04-18 10:33:41] 2026-04-18 09:32:43,440 | INFO     | chi2: 1.9574271651757602
[2026-04-18 10:33:41] 2026-04-18 09:32:43,440 | INFO     | current chi2=1.9574271651757602 (change=0.25231846067126196 %)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,440 | INFO     | right removable region: 285
[2026-04-18 10:33:41] 2026-04-18 09:32:43,440 | INFO     | sum of square deviations: 7648472848.006886
[2026-04-18 10:33:41] 2026-04-18 09:32:43,441 | INFO     | sum of deviations: -132306583234.62195
[2026-04-18 10:33:41] 2026-04-18 09:32:43,441 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,442 | INFO     | mean y: 2426690.213058419
[2026-04-18 10:33:41] 2026-04-18 09:32:43,442 | INFO     | intersect: 2426690.213058419
[2026-04-18 10:33:41] 2026-04-18 09:32:43,442 | INFO     | chi2: 1.5878441829706507
[2026-04-18 10:33:41] 2026-04-18 09:32:43,442 | INFO     | current chi2=1.5878441829706507 (change=46.370918122133276 %)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,442 | INFO     | sum of square deviations: 7261147988.95108
[2026-04-18 10:33:41] 2026-04-18 09:32:43,443 | INFO     | sum of deviations: -119901316192.88812
[2026-04-18 10:33:41] 2026-04-18 09:32:43,443 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,443 | INFO     | mean y: 2421796.56993007
[2026-04-18 10:33:41] 2026-04-18 09:32:43,444 | INFO     | intersect: 2421796.56993007
[2026-04-18 10:33:41] 2026-04-18 09:32:43,444 | INFO     | chi2: 1.5691065306305587
[2026-04-18 10:33:41] 2026-04-18 09:32:43,444 | INFO     | current chi2=1.5691065306305587 (change=1.1800687083184844 %)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,444 | INFO     | left removable region: 10
[2026-04-18 10:33:41] 2026-04-18 09:32:43,444 | INFO     | sum of square deviations: 6454991203.149107
[2026-04-18 10:33:41] 2026-04-18 09:32:43,445 | INFO     | sum of deviations: -95293375850.07632
[2026-04-18 10:33:41] 2026-04-18 09:32:43,445 | INFO     | mean x (centered): 0.0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,445 | INFO     | mean y: 2431745.247272727
[2026-04-18 10:33:41] 2026-04-18 09:32:43,445 | INFO     | intersect: 2431745.247272727
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | chi2: 0.541080507960446
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | current memory leak: -14.76 B/s (using 275 data points, chi2=0.54)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | could have reported an average CPU frequency of 2927 MHz (14 samples)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | ..............................
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . Timing measurements:
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . get job = 0 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . initial setup = 8 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . payload setup = 8 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . stage-in = 0 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . payload execution = 18006 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,446 | INFO     | . stage-out = 6 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,447 | INFO     | . log creation = 0 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,447 | INFO     | ..............................
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | 
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | job summary report
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | --------------------------------------------------
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | PanDA job id: 7097910228
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | task id: 49278310
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | errors: (none)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 10:33:41] 2026-04-18 09:32:43,492 | INFO     | pilot state: finished 
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | transexitcode: 0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | exeerrorcode: 0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | exeerrordiag: 
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | exitcode: 0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | exitmsg: OK
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | cpuconsumptiontime: 70173 s
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | nevents: 400
[2026-04-18 10:33:41] 2026-04-18 09:32:43,493 | INFO     | neventsw: 0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | pid: 13933
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | pgrp: 13933
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | corecount: 4
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | event service: False
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | sizes: {0: 2281654, 1: 2283483, 11: 2283483, 18018: 2315881, 18025: 2324877, 18028: 2325255}
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | --------------------------------------------------
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | 
[2026-04-18 10:33:41] 2026-04-18 09:32:43,494 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-04-18 10:33:41] 2026-04-18 09:32:43,507 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,507 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,507 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,507 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 10:33:41] 2026-04-18 09:32:43,510 | INFO     | job 7097910228 has completed (purged errors)
[2026-04-18 10:33:41] 2026-04-18 09:32:43,510 | INFO     | overall cleanup function is called
[2026-04-18 10:33:41] 2026-04-18 09:32:43,556 | INFO     | PID=9551 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-18 10:33:41] 2026-04-18 09:32:44,518 | INFO     | --- collectZombieJob: --- 10, [13933]
[2026-04-18 10:33:41] 2026-04-18 09:32:44,518 | INFO     | zombie collector waiting for pid 13933
[2026-04-18 10:33:41] 2026-04-18 09:32:44,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 10:33:41] 2026-04-18 09:32:44,519 | INFO     | collected zombie processes
[2026-04-18 10:33:41] 2026-04-18 09:32:44,519 | INFO     | will attempt to kill all subprocesses of pid=13933
[2026-04-18 10:33:41] 2026-04-18 09:32:44,577 | INFO     | process IDs to be killed: [13933] (in reverse order)
[2026-04-18 10:33:41] 2026-04-18 09:32:44,605 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 10:33:41] 2026-04-18 09:32:44,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 10:33:41] 2026-04-18 09:32:44,607 | INFO     | did not find any defunct processes belonging to 13933
[2026-04-18 10:33:41] 2026-04-18 09:32:44,608 | INFO     | did not find any defunct processes belonging to 13933
[2026-04-18 10:33:41] 2026-04-18 09:32:44,609 | INFO     | Ready for new job
[2026-04-18 10:33:41] 2026-04-18 09:32:44,610 | INFO     | **************************************
[2026-04-18 10:33:41] 2026-04-18 09:32:44,610 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 10:33:41] 2026-04-18 09:32:44,610 | INFO     | **************************************
[2026-04-18 10:33:41] 2026-04-18 09:32:44,610 | INFO     | 
[2026-04-18 10:33:41] 2026-04-18 09:32:44,630 | INFO     | architecture information:
[2026-04-18 10:33:41] 2026-04-18 09:32:44,630 | INFO     | executing command: cat /etc/os-release
[2026-04-18 10:33:41] 2026-04-18 09:32:44,638 | INFO     | cat /etc/os-release:
[2026-04-18 10:33:41] NAME="CentOS Linux"
[2026-04-18 10:33:41] VERSION="7 (Core)"
[2026-04-18 10:33:41] ID="centos"
[2026-04-18 10:33:41] ID_LIKE="rhel fedora"
[2026-04-18 10:33:41] VERSION_ID="7"
[2026-04-18 10:33:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 10:33:41] ANSI_COLOR="0;31"
[2026-04-18 10:33:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 10:33:41] HOME_URL="https://www.centos.org/"
[2026-04-18 10:33:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 10:33:41] 
[2026-04-18 10:33:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 10:33:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 10:33:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 10:33:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 10:33:41] 
[2026-04-18 10:33:41] 2026-04-18 09:32:44,638 | INFO     | **************************************
[2026-04-18 10:33:41] 2026-04-18 09:32:45,142 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-04-18 10:33:41] 2026-04-18 09:32:45,154 | INFO     | sufficient remaining disk space (431433449472 B)
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | INFO     | update_server=False
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 10:33:41] 2026-04-18 09:32:45,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 10:33:41] 2026-04-18 09:32:45,156 | INFO     | aborting loop
[2026-04-18 10:33:41] 2026-04-18 09:32:45,532 | INFO     | all job control threads have been joined
[2026-04-18 10:33:41] 2026-04-18 09:32:45,963 | INFO     | all data control threads have been joined
[2026-04-18 10:33:41] 2026-04-18 09:32:46,122 | INFO     | all payload control threads have been joined
[2026-04-18 10:33:41] 2026-04-18 09:32:46,161 | INFO     | [job] retrieve thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,161 | INFO     | [job] queue monitor thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,163 | INFO     | [job] job monitor thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,257 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 10:33:41] 2026-04-18 09:32:46,479 | INFO     | [job] validate thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,538 | INFO     | [job] control thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,574 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,775 | INFO     | [data] copytool_in thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:46,969 | INFO     | [data] control thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:47,072 | INFO     | [payload] failed_post thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:47,127 | INFO     | [payload] control thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:47,391 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:47,647 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:47,747 | INFO     | [payload] validate_post thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:48,411 | INFO     | [data] copytool_out thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:32:49,163 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 10:33:41] 2026-04-18 09:33:15,688 | INFO     | PID=9551 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-18 10:33:41] 2026-04-18 09:33:15,688 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 10:33:41] 2026-04-18 09:33:15,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 10:33:41] 2026-04-18 09:33:15,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 10:33:41] 2026-04-18 09:33:34,158 | INFO     | [monitor] cgroup control has ended
[2026-04-18 10:33:41] 2026-04-18 09:33:36,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818381760320)>', '<ExcThread(monitor, started 139817937520384)>']
[2026-04-18 10:33:41] 2026-04-18 09:33:36,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 10:33:41] 2026-04-18 09:33:36,796 | INFO     | [monitor] control thread has ended
[2026-04-18 10:33:41] 2026-04-18 09:33:41,163 | INFO     | all workflow threads have been joined
[2026-04-18 10:33:41] 2026-04-18 09:33:41,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 10:33:41] 2026-04-18 09:33:41,164 | INFO     | traces error code: 0
[2026-04-18 10:33:41] 2026-04-18 09:33:41,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 10:33:41] 2026-04-18 09:33:41,264 [wrapper] ==== pilot stdout END ====
[2026-04-18 10:33:41] 2026-04-18 09:33:41,266 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 10:33:41] 2026-04-18 09:33:41,268 [wrapper] pilotpid: 9551
[2026-04-18 10:33:41] 2026-04-18 09:33:41,270 [wrapper] Pilot exit status: 0
[2026-04-18 10:33:41] 2026-04-18 09:33:41,288 [wrapper] pandaids: 7097910228
[2026-04-18 10:33:41] 2026-04-18 09:33:41,304 [wrapper] cleanup supervisor_pilot   23483 9552
[2026-04-18 10:33:41] 2026-04-18 09:33:41,306 [wrapper] Test setup, not cleaning
[2026-04-18 10:33:41] 2026-04-18 09:33:41,308 [wrapper] apfmon messages muted
[2026-04-18 10:33:41] 2026-04-18 09:33:41,310 [wrapper] ==== wrapper stdout END ====
[2026-04-18 10:33:41] 2026-04-18 09:33:41,312 [wrapper] ==== wrapper stderr END ====
[2026-04-18 10:33:41]  *** Error codes and diagnostics ***
[2026-04-18 10:33:41]     "exeErrorCode": 0,
[2026-04-18 10:33:41]     "pilotErrorCode": 0,
[2026-04-18 10:33:41]  *** Listing of results directory ***
[2026-04-18 10:33:41] total 477112
[2026-04-18 10:33:41] -rwx------ 1 m m     36322 Apr 16 17:05 runpilot2-wrapper.sh
[2026-04-18 10:33:41] -rw-r--r-- 1 m m    644190 Apr 17 09:44 pilot3.tar.gz
[2026-04-18 10:33:41] -rw-r--r-- 1 m m      5094 Apr 18 04:14 queuedata.json
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m       100 Apr 18 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 10:33:41] -rwxr-xr-x 1 m m      7986 Apr 18 05:28 run_atlas
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m       105 Apr 18 05:28 job.xml
[2026-04-18 10:33:41] -rw-r--r-- 2 m m     15665 Apr 18 05:29 start_atlas.sh
[2026-04-18 10:33:41] drwxrwx--x 2 m m      4096 Apr 18 05:29 shared
[2026-04-18 10:33:41] -rw-r--r-- 2 m m    656937 Apr 18 05:29 input.tar.gz
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m      5872 Apr 18 05:29 init_data.xml
[2026-04-18 10:33:41] -rw-r--r-- 2 m m 253168797 Apr 18 05:29 EVNT.49137397._000001.pool.root.1
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m         0 Apr 18 05:29 boinc_lockfile
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m      2596 Apr 18 05:31 pandaJob.out
[2026-04-18 10:33:41] -rw------- 1 m m    997909 Apr 18 05:31 agis_schedconf.cvmfs.json
[2026-04-18 10:33:41] -rw------- 1 m m       424 Apr 18 05:32 workernode_map.json
[2026-04-18 10:33:41] drwx------ 5 m m      4096 Apr 18 05:32 pilot3
[2026-04-18 10:33:41] -rw------- 1 m m 227377793 Apr 18 10:32 HITS.49278310._000058.pool.root.1
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m       488 Apr 18 10:32 boinc_task_state.xml
[2026-04-18 10:33:41] -rw------- 1 m m      1014 Apr 18 10:32 memory_monitor_summary.json
[2026-04-18 10:33:41] -rw------- 1 m m   1512404 Apr 18 10:32 agis_ddmendpoints.agis.ALL.json
[2026-04-18 10:33:41] -rw------- 1 m m    354038 Apr 18 10:32 log.49278310._000058.job.log.tgz.1
[2026-04-18 10:33:41] -rw------- 1 m m      6310 Apr 18 10:32 heartbeat_new.json
[2026-04-18 10:33:41] -rw------- 1 m m      6201 Apr 18 10:32 heartbeat.json
[2026-04-18 10:33:41] -rw------- 1 m m        95 Apr 18 10:33 pilot_heartbeat.json
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m      8192 Apr 18 10:33 boinc_mmap_file
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m        28 Apr 18 10:33 wrapper_checkpoint.txt
[2026-04-18 10:33:41] -rw------- 1 m m      4740 Apr 18 10:33 pilotlog.txt
[2026-04-18 10:33:41] -rw------- 1 m m   1625034 Apr 18 10:33 log.49278310._000058.job.log.1
[2026-04-18 10:33:41] -rw------- 1 m m       357 Apr 18 10:33 output.list
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m       410 Apr 18 10:33 runtime_log
[2026-04-18 10:33:41] -rw------- 1 m m   1996800 Apr 18 10:33 result.tar.gz
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m      8351 Apr 18 10:33 runtime_log.err
[2026-04-18 10:33:41] -rw------- 1 m m       639 Apr 18 10:33 08e211d92f9f.diag
[2026-04-18 10:33:41] -rw-rw-r-- 1 m m     20768 Apr 18 10:33 stderr.txt
[2026-04-18 10:33:41] HITS file was successfully produced:
[2026-04-18 10:33:41] -rw------- 1 m m 227377793 Apr 18 10:32 shared/HITS.pool.root.1
[2026-04-18 10:33:41]  *** Contents of shared directory: ***
[2026-04-18 10:33:41] total 471904
[2026-04-18 10:33:41] -rw-r--r-- 2 m m     15665 Apr 18 05:29 start_atlas.sh
[2026-04-18 10:33:41] -rw-r--r-- 2 m m    656937 Apr 18 05:29 input.tar.gz
[2026-04-18 10:33:41] -rw-r--r-- 2 m m 253168797 Apr 18 05:29 ATLAS.root_0
[2026-04-18 10:33:41] -rw------- 1 m m 227377793 Apr 18 10:32 HITS.pool.root.1
[2026-04-18 10:33:41] -rw------- 1 m m   1996800 Apr 18 10:33 result.tar.gz
10:33:43 (5238): run_atlas exited; CPU time 70341.647848
10:33:43 (5238): called boinc_finish(0)

</stderr_txt>
]]>

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