Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-23 13:43:42 (5068): vboxwrapper version 26210
2026-04-23 13:43:42 (5068): BOINC client version: 8.2.9
2026-04-23 13:43:43 (5068): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-04-23 13:43:43 (5068): Successfully copied 'init_data.xml' to the shared directory.
2026-04-23 13:43:43 (5068): Create VM. (boinc_ec3a6b7813912628, slot#2)
2026-04-23 13:43:44 (5068): Setting Memory Size for VM. (4400MB)
2026-04-23 13:43:44 (5068): Setting CPU Count for VM. (4)
2026-04-23 13:43:44 (5068): Setting Chipset Options for VM.
2026-04-23 13:43:45 (5068): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-23 13:43:45 (5068): Setting Boot Options for VM.
2026-04-23 13:43:45 (5068): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-23 13:43:46 (5068): Enabling VM Network Access.
2026-04-23 13:43:46 (5068): Disabling USB Support for VM.
2026-04-23 13:43:46 (5068): Disabling COM Port Support for VM.
2026-04-23 13:43:46 (5068): Disabling LPT Port Support for VM.
2026-04-23 13:43:47 (5068): Disabling Audio Support for VM.
2026-04-23 13:43:47 (5068): Disabling Clipboard Support for VM.
2026-04-23 13:43:47 (5068): Disabling Drag and Drop Support for VM.
2026-04-23 13:43:47 (5068): Adding storage controller(s) to VM.
2026-04-23 13:43:48 (5068): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-23 13:43:48 (5068): Adding VirtualBox Guest Additions to VM.
2026-04-23 13:43:48 (5068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-23 13:43:49 (5068): forwarding host port 50961 to guest port 80
2026-04-23 13:43:49 (5068): Enabling remote desktop for VM.
2026-04-23 13:43:49 (5068): Required extension pack not installed, remote desktop not enabled.
2026-04-23 13:43:49 (5068): Enabling shared directory for VM.
2026-04-23 13:43:50 (5068): Starting VM using VBoxManage interface. (boinc_ec3a6b7813912628, slot#2)
2026-04-23 13:43:53 (5068): Successfully started VM. (PID = '4208')
2026-04-23 13:43:53 (5068): Reporting VM Process ID to BOINC.
2026-04-23 13:43:53 (5068): Guest Log: BIOS: VirtualBox 6.1.34
2026-04-23 13:43:53 (5068): Guest Log: CPUID EDX: 0x178bfbff
2026-04-23 13:43:53 (5068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-23 13:43:53 (5068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-23 13:43:53 (5068): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-23 13:43:53 (5068): Detected: Web Application Enabled (http://localhost:50961)
2026-04-23 13:43:53 (5068): Preference change detected
2026-04-23 13:43:53 (5068): Setting CPU throttle for VM. (85%)
2026-04-23 13:43:53 (5068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-23 13:43:55 (5068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-23 13:43:55 (5068): Guest Log: BIOS: Booting from Hard Disk...
2026-04-23 13:43:58 (5068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-23 13:43:58 (5068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-23 13:43:58 (5068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-23 13:44:04 (5068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-23 13:44:04 (5068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-23 13:44:11 (5068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000149 main     Log opened 2026-04-23T13:44:09.398097000Z
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000243 main     OS Product: Linux
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000312 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000340 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000341 main     Process ID: 1307
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.000342 main     Package type: LINUX_64BITS_GENERIC
2026-04-23 13:44:11 (5068): Guest Log: 00:00:00.001381 main     5.2.32 r132073 started. Verbose level = 0
2026-04-23 13:44:11 (5068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-23 13:44:11 (5068): Guest Log: [INFO] Mounting shared directory
2026-04-23 13:44:11 (5068): Guest Log: [INFO] Checking for init_data.xml
2026-04-23 13:44:21 (5068): Guest Log: 00:00:10.011768 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 256 543 000ns (GuestNow=1 776 944 661 144 861 000 ns GuestLast=1 776 951 849 401 404 000 ns fSetTimeLastLoop=true )
2026-04-23 13:44:38 (5068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-23 13:44:38 (5068): Guest Log: [INFO] Detected branch: prod
2026-04-23 13:44:38 (5068): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-23 13:44:38 (5068): Guest Log: Copying input files
2026-04-23 13:44:40 (5068): Guest Log: Copied input files into RunAtlas.
2026-04-23 13:44:40 (5068): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-23 13:44:40 (5068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-23 13:44:40 (5068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-23 13:44:40 (5068): Guest Log: Further information can be found at the LHC@home message board.
2026-04-23 13:45:04 (5068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-23 13:45:05 (5068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-23 13:45:05 (5068): Guest Log: 2.6.3.0 1588 0 32188 158764 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-23 13:45:06 (5068): Guest Log: copied the webapp to /var/www
2026-04-23 13:45:06 (5068): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-23 13:45:06 (5068): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-23 13:45:07 (5068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-23 13:45:07 (5068): Guest Log:  *** Starting ATLAS job. (PandaID=7093245004 taskID=49545114) ***
2026-04-23 15:24:33 (5068): Status Report: Elapsed Time: '6000.000000'
2026-04-23 15:24:33 (5068): Status Report: CPU Time: '19311.800593'
2026-04-23 17:05:21 (5068): Status Report: Elapsed Time: '12000.000000'
2026-04-23 17:05:21 (5068): Status Report: CPU Time: '40516.158517'
2026-04-23 17:21:15 (5068): Guest Log:  *** Job finished ***
2026-04-23 17:21:15 (5068): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:20:40,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:20:40,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:05,997 | INFO     | [monitor] cgroup control has ended
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:06,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043783866176)>', '<ExcThread(monitor, started 140042903217920)>']
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:07,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:07,746 | INFO     | [monitor] control thread has ended
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:11,996 | INFO     | all workflow threads have been joined
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:11,996 | INFO     | end of generic workflow (traces error code: 0)
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:11,997 | INFO     | traces error code: 0
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:11,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,090 [wrapper] ==== pilot stdout END ====
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,096 [wrapper] ==== wrapper stdout RESUME ====
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,100 [wrapper] pilotpid: 6003
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,105 [wrapper] Pilot exit status: 0
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,413 [wrapper] pandaids: 7093245004
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,444 [wrapper] cleanup supervisor_pilot 27571 6004
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,450 [wrapper] Test setup, not cleaning
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,456 [wrapper] apfmon messages muted
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,461 [wrapper] ==== wrapper stdout END ====
2026-04-23 17:21:15 (5068): Guest Log: 2026-04-23 15:21:12,466 [wrapper] ==== wrapper stderr END ====
2026-04-23 17:21:15 (5068): Guest Log:  *** Error codes and diagnostics ***
2026-04-23 17:21:15 (5068): Guest Log:     "exeErrorCode": 0,
2026-04-23 17:21:15 (5068): Guest Log:     "pilotErrorCode": 0,
2026-04-23 17:21:15 (5068): Guest Log:  *** Listing of results directory ***
2026-04-23 17:21:15 (5068): Guest Log: total 191084
2026-04-23 17:21:15 (5068): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 16 16:06 runpilot2-wrapper.sh
2026-04-23 17:21:15 (5068): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 17 08:44 pilot3.tar.gz
2026-04-23 17:21:15 (5068): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 18 03:11 queuedata.json
2026-04-23 17:21:15 (5068): Guest Log: -rwxr-xr-x. 1 atlas atlas      5713 Apr 23 11:44 init_data.xml
2026-04-23 17:21:15 (5068): Guest Log: -rwxr-xr-x. 1 atlas atlas    656939 Apr 23 11:44 input.tar.gz
2026-04-23 17:21:15 (5068): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 23 11:44 start_atlas.sh
2026-04-23 17:21:15 (5068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 23 11:44 EVNT.49539591._000615.pool.root.1 -> /data/./ATLAS.root_0
2026-04-23 17:21:15 (5068): Guest Log: -rw-r--r--. 1 atlas atlas      2605 Apr 23 11:45 pandaJob.out
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas    996693 Apr 23 11:46 agis_schedconf.cvmfs.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas       428 Apr 23 11:46 workernode_map.json
2026-04-23 17:21:15 (5068): Guest Log: drwx------. 5 atlas atlas      4096 Apr 23 11:46 pilot3
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas 188712892 Apr 23 15:19 HITS.49545114._015370.pool.root.1
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas        95 Apr 23 15:19 pilot_heartbeat.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas         0 Apr 23 15:20 memory_monitor_summary.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 23 15:20 agis_ddmendpoints.agis.ALL.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas    324574 Apr 23 15:20 log.49545114._015370.job.log.tgz.1
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas      6391 Apr 23 15:20 heartbeat_new.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas      6282 Apr 23 15:20 heartbeat.json
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas      4874 Apr 23 15:21 pilotlog.txt
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas   1160988 Apr 23 15:21 log.49545114._015370.job.log.1
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas       357 Apr 23 15:21 output.list
2026-04-23 17:21:15 (5068): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 23 15:21 runtime_log
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas   1505280 Apr 23 15:21 result.tar.gz
2026-04-23 17:21:15 (5068): Guest Log: -rw-r--r--. 1 atlas atlas      8365 Apr 23 15:21 runtime_log.err
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas       655 Apr 23 15:21 090414e939ce.diag
2026-04-23 17:21:15 (5068): Guest Log: Looking for outputfile HITS.49545114._015370.pool.root.1
2026-04-23 17:21:15 (5068): Guest Log: HITS file was successfully produced
2026-04-23 17:21:15 (5068): Guest Log: -rw-------. 1 atlas atlas 188712892 Apr 23 15:19 /home/atlas/RunAtlas/HITS.49545114._015370.pool.root.1
2026-04-23 17:21:16 (5068): Guest Log: Successfully finished the ATLAS job!
2026-04-23 17:21:16 (5068): Guest Log: Copying the results back to the shared directory!
2026-04-23 17:21:16 (5068): Guest Log:  *** Contents of shared directory: ***
2026-04-23 17:21:16 (5068): Guest Log: total 459916
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root 280045840 Apr 23 11:43 ATLAS.root_0
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root 188712892 Apr 23 15:21 HITS.pool.root.1
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root      5713 Apr 23 11:43 init_data.xml
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root    656939 Apr 18 04:17 input.tar.gz
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root   1505280 Apr 23 15:21 result.tar.gz
2026-04-23 17:21:16 (5068): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 04:17 start_atlas.sh
2026-04-23 17:21:16 (5068): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-23 17:21:16 (5068): VM Completion File Detected.
2026-04-23 17:21:16 (5068): Powering off VM.
2026-04-23 17:21:17 (5068): Successfully stopped VM.
2026-04-23 17:21:17 (5068): Deregistering VM. (boinc_ec3a6b7813912628, slot#2)
2026-04-23 17:21:17 (5068): Removing network bandwidth throttle group from VM.
2026-04-23 17:21:17 (5068): Removing VM from VirtualBox.
2026-04-23 17:21:22 (5068): called boinc_finish(0)

</stderr_txt>
]]>

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