Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-23 10:04:15 (5812): vboxwrapper version 26210
2026-04-23 10:04:15 (5812): BOINC client version: 8.2.9
2026-04-23 10:04:15 (5812): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-04-23 10:04:16 (5812): Successfully copied 'init_data.xml' to the shared directory.
2026-04-23 10:04:16 (5812): Create VM. (boinc_52fe0c6e0f5fb592, slot#2)
2026-04-23 10:04:16 (5812): Setting Memory Size for VM. (4400MB)
2026-04-23 10:04:17 (5812): Setting CPU Count for VM. (4)
2026-04-23 10:04:17 (5812): Setting Chipset Options for VM.
2026-04-23 10:04:17 (5812): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-23 10:04:17 (5812): Setting Boot Options for VM.
2026-04-23 10:04:18 (5812): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-23 10:04:18 (5812): Enabling VM Network Access.
2026-04-23 10:04:18 (5812): Disabling USB Support for VM.
2026-04-23 10:04:19 (5812): Disabling COM Port Support for VM.
2026-04-23 10:04:19 (5812): Disabling LPT Port Support for VM.
2026-04-23 10:04:19 (5812): Disabling Audio Support for VM.
2026-04-23 10:04:19 (5812): Disabling Clipboard Support for VM.
2026-04-23 10:04:20 (5812): Disabling Drag and Drop Support for VM.
2026-04-23 10:04:20 (5812): Adding storage controller(s) to VM.
2026-04-23 10:04:20 (5812): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-23 10:04:21 (5812): Adding VirtualBox Guest Additions to VM.
2026-04-23 10:04:21 (5812): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-23 10:04:21 (5812): forwarding host port 59598 to guest port 80
2026-04-23 10:04:21 (5812): Enabling remote desktop for VM.
2026-04-23 10:04:22 (5812): Required extension pack not installed, remote desktop not enabled.
2026-04-23 10:04:22 (5812): Enabling shared directory for VM.
2026-04-23 10:04:22 (5812): Starting VM using VBoxManage interface. (boinc_52fe0c6e0f5fb592, slot#2)
2026-04-23 10:04:26 (5812): Successfully started VM. (PID = '3288')
2026-04-23 10:04:26 (5812): Reporting VM Process ID to BOINC.
2026-04-23 10:04:26 (5812): Guest Log: BIOS: VirtualBox 6.1.34
2026-04-23 10:04:26 (5812): Guest Log: CPUID EDX: 0x178bfbff
2026-04-23 10:04:26 (5812): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-23 10:04:26 (5812): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-23 10:04:26 (5812): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-23 10:04:26 (5812): Detected: Web Application Enabled (http://localhost:59598)
2026-04-23 10:04:26 (5812): Preference change detected
2026-04-23 10:04:26 (5812): Setting CPU throttle for VM. (85%)
2026-04-23 10:04:26 (5812): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-23 10:04:28 (5812): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-23 10:04:28 (5812): Guest Log: BIOS: Booting from Hard Disk...
2026-04-23 10:04:31 (5812): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-23 10:04:31 (5812): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-23 10:04:31 (5812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-23 10:04:41 (5812): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-23 10:04:41 (5812): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-23 10:04:47 (5812): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000140 main     Log opened 2026-04-23T10:04:44.347416000Z
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000259 main     OS Product: Linux
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000293 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000323 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000363 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000364 main     Process ID: 1307
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.000365 main     Package type: LINUX_64BITS_GENERIC
2026-04-23 10:04:47 (5812): Guest Log: 00:00:00.001160 main     5.2.32 r132073 started. Verbose level = 0
2026-04-23 10:04:47 (5812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-23 10:04:47 (5812): Guest Log: [INFO] Mounting shared directory
2026-04-23 10:04:47 (5812): Guest Log: [INFO] Checking for init_data.xml
2026-04-23 10:04:51 (5812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-23 10:04:51 (5812): Guest Log: [INFO] Detected branch: prod
2026-04-23 10:04:51 (5812): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-23 10:04:51 (5812): Guest Log: Copying input files
2026-04-23 10:04:53 (5812): Guest Log: Copied input files into RunAtlas.
2026-04-23 10:04:53 (5812): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-23 10:04:53 (5812): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-23 10:04:53 (5812): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-23 10:04:53 (5812): Guest Log: Further information can be found at the LHC@home message board.
2026-04-23 10:04:57 (5812): Guest Log: 00:00:10.004972 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 964 472 000ns (GuestNow=1 776 931 496 386 318 000 ns GuestLast=1 776 938 684 350 790 000 ns fSetTimeLastLoop=true )
2026-04-23 10:05:03 (5812): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-23 10:05:03 (5812): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-23 10:05:03 (5812): Guest Log: 2.6.3.0 1582 0 30180 158756 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-23 10:05:04 (5812): Guest Log: copied the webapp to /var/www
2026-04-23 10:05:04 (5812): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-23 10:05:04 (5812): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-23 10:05:05 (5812): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-23 10:05:05 (5812): Guest Log:  *** Starting ATLAS job. (PandaID=7093247812 taskID=49545114) ***
2026-04-23 11:45:41 (5812): Status Report: Elapsed Time: '6000.000000'
2026-04-23 11:45:41 (5812): Status Report: CPU Time: '18967.381585'
2026-04-23 13:26:34 (5812): Status Report: Elapsed Time: '12000.000000'
2026-04-23 13:26:34 (5812): Status Report: CPU Time: '40251.393620'
2026-04-23 13:43:30 (5812): Guest Log:  *** Job finished ***
2026-04-23 13:43:30 (5812): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:18,167 | INFO     | all workflow threads have been joined
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:18,167 | INFO     | end of generic workflow (traces error code: 0)
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:18,168 | INFO     | traces error code: 0
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:18,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,801 | INFO     | PID=5972 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,801 | INFO     | found 0 job(s) in 20 queues
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,802 | INFO     | [monitor] control thread has ended
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,898 [wrapper] ==== pilot stdout END ====
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,904 [wrapper] ==== wrapper stdout RESUME ====
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,911 [wrapper] pilotpid: 5972
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:27,917 [wrapper] Pilot exit status: 0
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,317 [wrapper] pandaids: 7093247812
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,347 [wrapper] cleanup supervisor_pilot 27515 5973
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,353 [wrapper] Test setup, not cleaning
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,359 [wrapper] apfmon messages muted
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,364 [wrapper] ==== wrapper stdout END ====
2026-04-23 13:43:30 (5812): Guest Log: 2026-04-23 11:43:28,370 [wrapper] ==== wrapper stderr END ====
2026-04-23 13:43:30 (5812): Guest Log:  *** Error codes and diagnostics ***
2026-04-23 13:43:30 (5812): Guest Log:     "exeErrorCode": 0,
2026-04-23 13:43:30 (5812): Guest Log:     "pilotErrorCode": 0,
2026-04-23 13:43:30 (5812): Guest Log:  *** Listing of results directory ***
2026-04-23 13:43:30 (5812): Guest Log: total 184312
2026-04-23 13:43:30 (5812): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 16 16:06 runpilot2-wrapper.sh
2026-04-23 13:43:30 (5812): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr 17 08:44 pilot3.tar.gz
2026-04-23 13:43:30 (5812): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr 18 03:11 queuedata.json
2026-04-23 13:43:30 (5812): Guest Log: -rwxr-xr-x. 1 atlas atlas      5713 Apr 23 08:04 init_data.xml
2026-04-23 13:43:30 (5812): Guest Log: -rwxr-xr-x. 1 atlas atlas    656923 Apr 23 08:04 input.tar.gz
2026-04-23 13:43:30 (5812): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 23 08:04 start_atlas.sh
2026-04-23 13:43:30 (5812): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 23 08:04 EVNT.49539591._000622.pool.root.1 -> /data/./ATLAS.root_0
2026-04-23 13:43:30 (5812): Guest Log: -rw-r--r--. 1 atlas atlas      2605 Apr 23 08:05 pandaJob.out
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas    997258 Apr 23 08:05 agis_schedconf.cvmfs.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas       428 Apr 23 08:05 workernode_map.json
2026-04-23 13:43:30 (5812): Guest Log: drwx------. 5 atlas atlas      4096 Apr 23 08:05 pilot3
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas 181761875 Apr 23 11:41 HITS.49545114._015540.pool.root.1
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 23 11:42 memory_monitor_summary.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas        95 Apr 23 11:42 pilot_heartbeat.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 23 11:42 agis_ddmendpoints.agis.ALL.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas    321659 Apr 23 11:42 log.49545114._015540.job.log.tgz.1
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas      6396 Apr 23 11:42 heartbeat_new.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas      6287 Apr 23 11:42 heartbeat.json
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas       744 Apr 23 11:43 pilotlog.txt
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas   1177458 Apr 23 11:43 log.49545114._015540.job.log.1
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas       357 Apr 23 11:43 output.list
2026-04-23 13:43:30 (5812): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 23 11:43 runtime_log
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas   1515520 Apr 23 11:43 result.tar.gz
2026-04-23 13:43:30 (5812): Guest Log: -rw-r--r--. 1 atlas atlas      8365 Apr 23 11:43 runtime_log.err
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas       655 Apr 23 11:43 090521b153cf.diag
2026-04-23 13:43:30 (5812): Guest Log: Looking for outputfile HITS.49545114._015540.pool.root.1
2026-04-23 13:43:30 (5812): Guest Log: HITS file was successfully produced
2026-04-23 13:43:30 (5812): Guest Log: -rw-------. 1 atlas atlas 181761875 Apr 23 11:41 /home/atlas/RunAtlas/HITS.49545114._015540.pool.root.1
2026-04-23 13:43:31 (5812): Guest Log: Successfully finished the ATLAS job!
2026-04-23 13:43:31 (5812): Guest Log: Copying the results back to the shared directory!
2026-04-23 13:43:31 (5812): Guest Log:  *** Contents of shared directory: ***
2026-04-23 13:43:31 (5812): Guest Log: total 452388
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root 279279652 Apr 23 08:04 ATLAS.root_0
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root 181761875 Apr 23 11:43 HITS.pool.root.1
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root      5713 Apr 23 08:04 init_data.xml
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root    656923 Apr 18 04:17 input.tar.gz
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root   1515520 Apr 23 11:43 result.tar.gz
2026-04-23 13:43:31 (5812): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 04:17 start_atlas.sh
2026-04-23 13:43:31 (5812): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-23 13:43:31 (5812): VM Completion File Detected.
2026-04-23 13:43:31 (5812): Powering off VM.
2026-04-23 13:43:31 (5812): Successfully stopped VM.
2026-04-23 13:43:31 (5812): Deregistering VM. (boinc_52fe0c6e0f5fb592, slot#2)
2026-04-23 13:43:31 (5812): Removing network bandwidth throttle group from VM.
2026-04-23 13:43:32 (5812): Removing VM from VirtualBox.
2026-04-23 13:43:37 (5812): called boinc_finish(0)

</stderr_txt>
]]>

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