Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (3288315): wrapper (7.7.26015): starting
00:03:33 (3288315): wrapper: running run_atlas (--nthreads 12)
[2026-04-18 00:03:33] Arguments: --nthreads 12
[2026-04-18 00:03:33] Threads: 12
[2026-04-18 00:03:33] Checking for CVMFS
[2026-04-18 00:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 00:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 00:03:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 00:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 00:03:38] 2.13.3.0 9863 235331 178816 158566 2 17 32409360 32935937 17699 16776704 0 990259719 99.698 777765331 31934 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-18 00:03:38] CVMFS is ok
[2026-04-18 00:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 00:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 00:03:38] Further information can be found at the LHC@home message board.
[2026-04-18 00:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 00:03:38] Checking for apptainer binary...
[2026-04-18 00:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 00:03:38] Running /usr/bin/apptainer --version
[2026-04-18 00:03:38] apptainer version 1.4.5-2.el9
[2026-04-18 00:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 00:03:40] c-5-3.aglt2.org
[2026-04-18 00:03:40] apptainer works
[2026-04-18 00:03:40] Set ATHENA_PROC_NUMBER=12
[2026-04-18 00:03:40] Set ATHENA_CORE_NUMBER=12
[2026-04-18 00:03:40] Starting ATLAS job with PandaID=7093477216
[2026-04-18 00:03:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 13:44:54]  *** The last 200 lines of the pilot log: ***
[2026-04-18 13:44:54] 2026-04-18 15:20:52,956 | INFO     | mean y: 2638914.676291793
[2026-04-18 13:44:54] 2026-04-18 15:20:52,956 | INFO     | intersect: 2638914.676291793
[2026-04-18 13:44:54] 2026-04-18 15:20:52,957 | INFO     | chi2: 10.949615902972592
[2026-04-18 13:44:54] 2026-04-18 15:20:52,958 | INFO     | sum of square deviations: 86340515964.96484
[2026-04-18 13:44:54] 2026-04-18 15:20:53,046 | INFO     | sum of deviations: 969647225811.2699
[2026-04-18 13:44:54] 2026-04-18 15:20:53,046 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,046 | INFO     | mean y: 2642065.9127105665
[2026-04-18 13:44:54] 2026-04-18 15:20:53,046 | INFO     | intersect: 2642065.9127105665
[2026-04-18 13:44:54] 2026-04-18 15:20:53,047 | INFO     | chi2: 10.143420589747928
[2026-04-18 13:44:54] 2026-04-18 15:20:53,047 | INFO     | current chi2=10.143420589747928 (change=7.362772542603977 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,047 | INFO     | right removable region: 652
[2026-04-18 13:44:54] 2026-04-18 15:20:53,048 | INFO     | sum of square deviations: 86339577140.42525
[2026-04-18 13:44:54] 2026-04-18 15:20:53,138 | INFO     | sum of deviations: 675405938170.6648
[2026-04-18 13:44:54] 2026-04-18 15:20:53,139 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,139 | INFO     | mean y: 2658185.447166922
[2026-04-18 13:44:54] 2026-04-18 15:20:53,139 | INFO     | intersect: 2658185.447166922
[2026-04-18 13:44:54] 2026-04-18 15:20:53,140 | INFO     | chi2: 6.080644126914533
[2026-04-18 13:44:54] 2026-04-18 15:20:53,140 | INFO     | current chi2=6.080644126914533 (change=44.46705545841325 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,141 | INFO     | sum of square deviations: 84370741756.98619
[2026-04-18 13:44:54] 2026-04-18 15:20:53,235 | INFO     | sum of deviations: 476868763963.5825
[2026-04-18 13:44:54] 2026-04-18 15:20:53,236 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,236 | INFO     | mean y: 2673562.972222222
[2026-04-18 13:44:54] 2026-04-18 15:20:53,236 | INFO     | intersect: 2673562.972222222
[2026-04-18 13:44:54] 2026-04-18 15:20:53,237 | INFO     | chi2: 3.2330972781237874
[2026-04-18 13:44:54] 2026-04-18 15:20:53,237 | INFO     | current chi2=3.2330972781237874 (change=46.82969089058761 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,252 | INFO     | sum of square deviations: 82432085639.93779
[2026-04-18 13:44:54] 2026-04-18 15:20:53,265 | INFO     | sum of deviations: 351918940918.63806
[2026-04-18 13:44:54] 2026-04-18 15:20:53,266 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,266 | INFO     | mean y: 2683382.8522550543
[2026-04-18 13:44:54] 2026-04-18 15:20:53,266 | INFO     | intersect: 2683382.8522550543
[2026-04-18 13:44:54] 2026-04-18 15:20:53,267 | INFO     | chi2: 2.098490603625221
[2026-04-18 13:44:54] 2026-04-18 15:20:53,267 | INFO     | current chi2=2.098490603625221 (change=35.09349013949234 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,268 | INFO     | sum of square deviations: 80523494216.70245
[2026-04-18 13:44:54] 2026-04-18 15:20:53,280 | INFO     | sum of deviations: 258332606891.0719
[2026-04-18 13:44:54] 2026-04-18 15:20:53,280 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,281 | INFO     | mean y: 2690859.631661442
[2026-04-18 13:44:54] 2026-04-18 15:20:53,281 | INFO     | intersect: 2690859.631661442
[2026-04-18 13:44:54] 2026-04-18 15:20:53,282 | INFO     | chi2: 1.5150984632691764
[2026-04-18 13:44:54] 2026-04-18 15:20:53,282 | INFO     | current chi2=1.5150984632691764 (change=27.800560047693935 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,283 | INFO     | sum of square deviations: 78644538480.74248
[2026-04-18 13:44:54] 2026-04-18 15:20:53,295 | INFO     | sum of deviations: 187347612149.0236
[2026-04-18 13:44:54] 2026-04-18 15:20:53,296 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,296 | INFO     | mean y: 2696619.5260663508
[2026-04-18 13:44:54] 2026-04-18 15:20:53,296 | INFO     | intersect: 2696619.5260663508
[2026-04-18 13:44:54] 2026-04-18 15:20:53,297 | INFO     | chi2: 1.1822516976158557
[2026-04-18 13:44:54] 2026-04-18 15:20:53,298 | INFO     | current chi2=1.1822516976158557 (change=21.968655748955523 %)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,298 | INFO     | left removable region: 25
[2026-04-18 13:44:54] 2026-04-18 15:20:53,299 | INFO     | sum of square deviations: 76429532537.40683
[2026-04-18 13:44:54] 2026-04-18 15:20:53,310 | INFO     | sum of deviations: 232405265331.81354
[2026-04-18 13:44:54] 2026-04-18 15:20:53,311 | INFO     | mean x (centered): 0.0
[2026-04-18 13:44:54] 2026-04-18 15:20:53,311 | INFO     | mean y: 2700310.9920255183
[2026-04-18 13:44:54] 2026-04-18 15:20:53,311 | INFO     | intersect: 2700310.9920255183
[2026-04-18 13:44:54] 2026-04-18 15:20:53,312 | INFO     | chi2: 0.3412763396056621
[2026-04-18 13:44:54] 2026-04-18 15:20:53,312 | INFO     | current memory leak: 3.04 B/s (using 627 data points, chi2=0.34)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | could have reported an average CPU frequency of 2600 MHz (26 samples)
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | ..............................
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | . Timing measurements:
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | . get job = 2 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | . initial setup = 71 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | . payload setup = 176 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,314 | INFO     | . stage-in = 0 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,315 | INFO     | . payload execution = 40196 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,315 | INFO     | . stage-out = 7 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,315 | INFO     | . log creation = 0 s
[2026-04-18 13:44:54] 2026-04-18 15:20:53,315 | INFO     | ..............................
[2026-04-18 13:44:54] 2026-04-18 15:20:54,012 | INFO     | 
[2026-04-18 13:44:54] 2026-04-18 15:20:54,012 | INFO     | job summary report
[2026-04-18 13:44:54] 2026-04-18 15:20:54,012 | INFO     | --------------------------------------------------
[2026-04-18 13:44:54] 2026-04-18 15:20:54,012 | INFO     | PanDA job id: 7093477216
[2026-04-18 13:44:54] 2026-04-18 15:20:54,012 | INFO     | task id: 49545114
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | errors: (none)
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | pilot state: finished 
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | transexitcode: 0
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | exeerrorcode: 0
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | exeerrordiag: 
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | exitcode: 0
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | exitmsg: OK
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | cpuconsumptiontime: 53954 s
[2026-04-18 13:44:54] 2026-04-18 15:20:54,013 | INFO     | nevents: 400
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | neventsw: 0
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | pid: 3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | pgrp: 3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | corecount: 12
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | event service: False
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | sizes: {0: 2281022, 1: 2281623, 2: 2281707, 3: 2281735, 4: 2281763, 5: 2281763, 6: 2252047, 7: 2283776, 19: 2283804, 40377: 2324898, 40378: 2324897, 40386: 2334287
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | --------------------------------------------------
[2026-04-18 13:44:54] 2026-04-18 15:20:54,014 | INFO     | 
[2026-04-18 13:44:54] 2026-04-18 15:20:54,015 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-18 13:44:54] 2026-04-18 15:20:54,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,181 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 13:44:54] 2026-04-18 15:20:54,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,181 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 13:44:54] 2026-04-18 15:20:54,181 | INFO     | job 7093477216 has completed (purged errors)
[2026-04-18 13:44:54] 2026-04-18 15:20:54,181 | INFO     | overall cleanup function is called
[2026-04-18 13:44:54] 2026-04-18 15:20:55,219 | INFO     | --- collectZombieJob: --- 10, [3315081]
[2026-04-18 13:44:54] 2026-04-18 15:20:55,219 | INFO     | zombie collector waiting for pid 3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:55,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 13:44:54] 2026-04-18 15:20:55,220 | INFO     | collected zombie processes
[2026-04-18 13:44:54] 2026-04-18 15:20:55,220 | INFO     | will attempt to kill all subprocesses of pid=3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:56,524 | INFO     | process IDs to be killed: [3315081] (in reverse order)
[2026-04-18 13:44:54] 2026-04-18 15:20:56,642 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 13:44:54] 2026-04-18 15:20:56,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 13:44:54] 2026-04-18 15:20:56,661 | INFO     | did not find any defunct processes belonging to 3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:56,681 | INFO     | did not find any defunct processes belonging to 3315081
[2026-04-18 13:44:54] 2026-04-18 15:20:56,681 | INFO     | Ready for new job
[2026-04-18 13:44:54] 2026-04-18 15:20:56,684 | INFO     | **************************************
[2026-04-18 13:44:54] 2026-04-18 15:20:56,685 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 13:44:54] 2026-04-18 15:20:56,685 | INFO     | **************************************
[2026-04-18 13:44:54] 2026-04-18 15:20:56,685 | INFO     | 
[2026-04-18 13:44:54] 2026-04-18 15:20:56,687 | INFO     | architecture information:
[2026-04-18 13:44:54] 2026-04-18 15:20:56,691 | INFO     | executing command: cat /etc/os-release
[2026-04-18 13:44:54] 2026-04-18 15:20:56,715 | INFO     | cat /etc/os-release:
[2026-04-18 13:44:54] NAME="CentOS Linux"
[2026-04-18 13:44:54] VERSION="7 (Core)"
[2026-04-18 13:44:54] ID="centos"
[2026-04-18 13:44:54] ID_LIKE="rhel fedora"
[2026-04-18 13:44:54] VERSION_ID="7"
[2026-04-18 13:44:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 13:44:54] ANSI_COLOR="0;31"
[2026-04-18 13:44:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 13:44:54] HOME_URL="https://www.centos.org/"
[2026-04-18 13:44:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 13:44:54] 
[2026-04-18 13:44:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 13:44:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 13:44:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 13:44:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 13:44:54] 
[2026-04-18 13:44:54] 2026-04-18 15:20:56,715 | INFO     | **************************************
[2026-04-18 13:44:54] 2026-04-18 15:20:57,219 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-18 13:44:54] 2026-04-18 15:20:57,435 | INFO     | sufficient remaining disk space (74262249472 B)
[2026-04-18 13:44:54] 2026-04-18 15:20:57,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 13:44:54] 2026-04-18 15:20:57,436 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 13:44:54] 2026-04-18 15:20:57,436 | INFO     | update_server=False
[2026-04-18 13:44:54] 2026-04-18 15:20:57,436 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 13:44:54] 2026-04-18 15:20:57,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:44:54] 2026-04-18 15:20:57,458 | INFO     | aborting loop
[2026-04-18 13:44:54] 2026-04-18 15:20:57,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 13:44:54] 2026-04-18 15:20:57,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 13:44:54] 2026-04-18 15:20:57,881 | INFO     | all data control threads have been joined
[2026-04-18 13:44:54] 2026-04-18 15:20:58,096 | INFO     | all payload control threads have been joined
[2026-04-18 13:44:54] 2026-04-18 15:20:58,389 | INFO     | all job control threads have been joined
[2026-04-18 13:44:54] 2026-04-18 15:20:58,442 | INFO     | [job] retrieve thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,467 | INFO     | [job] job monitor thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,518 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,527 | INFO     | [data] copytool_in thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,543 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,567 | INFO     | [job] validate thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,827 | INFO     | [payload] validate_post thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:58,893 | INFO     | [data] control thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:59,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 13:44:54] 2026-04-18 15:20:59,140 | INFO     | [payload] control thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:59,143 | INFO     | [payload] failed_post thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:59,397 | INFO     | [job] control thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:59,480 | INFO     | [data] copytool_out thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:20:59,651 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:21:00,052 | INFO     | [job] queue monitor thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:21:01,657 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 13:44:54] 2026-04-18 15:21:11,073 [wrapper] supervise_pilot (15 min periods counter: 46)
[2026-04-18 13:44:54] 2026-04-18 15:21:26,728 | INFO     | PID=3298249 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 13:44:54] 2026-04-18 15:21:26,728 | INFO     | .. there are 30 such processes running
[2026-04-18 13:44:54] 2026-04-18 15:21:26,728 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 13:44:54] 2026-04-18 15:21:26,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 13:44:54] 2026-04-18 15:21:26,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 13:44:54] 2026-04-18 15:21:52,892 | INFO     | [monitor] cgroup control has ended
[2026-04-18 13:44:54] 2026-04-18 15:21:54,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543244195648)>', '<ExcThread(monitor, started 140542352529152)>']
[2026-04-18 13:44:54] 2026-04-18 15:21:54,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 13:44:54] 2026-04-18 15:21:54,999 | INFO     | [monitor] control thread has ended
[2026-04-18 13:44:54] 2026-04-18 15:21:59,597 | INFO     | all workflow threads have been joined
[2026-04-18 13:44:54] 2026-04-18 15:21:59,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 13:44:54] 2026-04-18 15:21:59,598 | INFO     | traces error code: 0
[2026-04-18 13:44:54] 2026-04-18 15:21:59,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 13:44:54] 2026-04-18 15:22:00,311 [wrapper] ==== pilot stdout END ====
[2026-04-18 13:44:54] 2026-04-18 15:22:00,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 13:44:54] 2026-04-18 15:22:00,388 [wrapper] pilotpid: 3298249
[2026-04-18 13:44:54] 2026-04-18 15:22:00,445 [wrapper] Pilot exit status: 0
[2026-04-18 13:44:54] 2026-04-18 15:22:00,664 [wrapper] pandaids: 7093477216
[2026-04-18 13:44:54] 2026-04-18 15:22:01,046 [wrapper] cleanup supervisor_pilot 1107869 3298250
[2026-04-18 13:44:54] 2026-04-18 15:22:01,072 [wrapper] Test setup, not cleaning
[2026-04-18 13:44:54] 2026-04-18 15:22:01,111 [wrapper] apfmon messages muted
[2026-04-18 13:44:54] 2026-04-18 15:22:01,137 [wrapper] ==== wrapper stdout END ====
[2026-04-18 13:44:54] 2026-04-18 15:22:01,224 [wrapper] ==== wrapper stderr END ====
[2026-04-18 13:44:54]  *** Error codes and diagnostics ***
[2026-04-18 13:44:54]     "exeErrorCode": 0,
[2026-04-18 13:44:54]     "pilotErrorCode": 0,
[2026-04-18 13:44:55]  *** Listing of results directory ***
[2026-04-18 13:44:55] total 465192
[2026-04-18 13:44:55] -rwx------. 1 boincer umatlas     36322 Apr 16 12:07 runpilot2-wrapper.sh
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas    644190 Apr 17 23:05 pilot3.tar.gz
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas      5094 Apr 17 23:07 queuedata.json
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas       100 Apr 18 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 13:44:55] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 00:03 run_atlas
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas       105 Apr 18 00:03 job.xml
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas 281279754 Apr 18 00:03 EVNT.49539591._000637.pool.root.1
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 00:03 start_atlas.sh
[2026-04-18 13:44:55] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 00:03 shared
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas    656937 Apr 18 00:03 input.tar.gz
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas         0 Apr 18 00:03 boinc_lockfile
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas      2605 Apr 18 00:03 pandaJob.out
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas        57 Apr 18 00:03 setup.sh.local
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas       438 Apr 18 00:07 workernode_map.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas    996998 Apr 18 00:07 agis_schedconf.cvmfs.json
[2026-04-18 13:44:55] drwx------. 5 boincer umatlas      4096 Apr 18 00:07 pilot3
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas 184409500 Apr 18 11:19 HITS.49545114._015909.pool.root.1
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas       488 Apr 18 11:19 boinc_task_state.xml
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas      1045 Apr 18 11:20 memory_monitor_summary.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas        95 Apr 18 11:20 pilot_heartbeat.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas   1512404 Apr 18 11:20 agis_ddmendpoints.agis.ALL.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas    635070 Apr 18 11:20 log.49545114._015909.job.log.tgz.1
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas      6405 Apr 18 11:20 heartbeat_new.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas      6296 Apr 18 11:20 heartbeat.json
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas      4819 Apr 18 11:21 pilotlog.txt
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas   2669471 Apr 18 11:22 log.49545114._015909.job.log.1
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas       357 Apr 18 11:22 output.list
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas       410 Apr 18 11:22 runtime_log
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas   3317760 Apr 18 11:22 result.tar.gz
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas      8951 Apr 18 11:22 runtime_log.err
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas       656 Apr 18 11:22 094996e8ec0c.diag
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas      6623 Apr 18 13:31 init_data.xml
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 13:44 boinc_mmap_file
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas        28 Apr 18 13:44 wrapper_checkpoint.txt
[2026-04-18 13:44:55] -rw-r--r--. 1 boincer umatlas     20828 Apr 18 13:44 stderr.txt
[2026-04-18 13:44:55] HITS file was successfully produced:
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas 184409500 Apr 18 11:19 shared/HITS.pool.root.1
[2026-04-18 13:44:55]  *** Contents of shared directory: ***
[2026-04-18 13:44:55] total 458684
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas 281279754 Apr 18 00:03 ATLAS.root_0
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas     15665 Apr 18 00:03 start_atlas.sh
[2026-04-18 13:44:55] -rw-r--r--. 2 boincer umatlas    656937 Apr 18 00:03 input.tar.gz
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas 184409500 Apr 18 11:19 HITS.pool.root.1
[2026-04-18 13:44:55] -rw-------. 1 boincer umatlas   3317760 Apr 18 11:22 result.tar.gz
13:44:57 (3288315): run_atlas exited; CPU time 55166.627188
13:44:57 (3288315): called boinc_finish(0)

</stderr_txt>
]]>

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