Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:10 (2776975): wrapper (7.7.26015): starting
23:48:10 (2776975): wrapper: running run_atlas (--nthreads 8)
[2026-04-17 23:48:10] Arguments: --nthreads 8
[2026-04-17 23:48:10] Threads: 8
[2026-04-17 23:48:10] Checking for CVMFS
[2026-04-17 23:48:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-17 23:48:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-17 23:48:11] Running cvmfs_config stat atlas.cern.ch
[2026-04-17 23:48:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-17 23:48:13] 2.13.3.0 11842 46823 446864 158565 1 924 39316175 40960001 19652 16776704 0 52524183 99.461 76614978 10833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-17 23:48:13] CVMFS is ok
[2026-04-17 23:48:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-17 23:48:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-17 23:48:13] Further information can be found at the LHC@home message board.
[2026-04-17 23:48:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-17 23:48:13] Checking for apptainer binary...
[2026-04-17 23:48:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-17 23:48:13] Running /usr/bin/apptainer --version
[2026-04-17 23:48:13] apptainer version 1.4.5-3.el9
[2026-04-17 23:48:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-17 23:48:13] c7-10-13.aglt2.org
[2026-04-17 23:48:13] apptainer works
[2026-04-17 23:48:14] Set ATHENA_PROC_NUMBER=8
[2026-04-17 23:48:14] Set ATHENA_CORE_NUMBER=8
[2026-04-17 23:48:14] Starting ATLAS job with PandaID=7098075541
[2026-04-17 23:48:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-19 05:55:24]  *** The last 200 lines of the pilot log: ***
[2026-04-19 05:55:24] 2026-04-19 09:54:38,378 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7098075541/memory_monitor_summary.json (trf name=prmon)
[2026-04-19 05:55:24] 2026-04-19 09:54:38,379 | INFO     | extracted standard info from prmon json
[2026-04-19 05:55:24] 2026-04-19 09:54:38,379 | INFO     | extracted standard memory fields from prmon json
[2026-04-19 05:55:24] 2026-04-19 09:54:38,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-19 05:55:24] 2026-04-19 09:54:38,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-19 05:55:24] 2026-04-19 09:54:38,458 | INFO     | fitting pss+swap vs Time
[2026-04-19 05:55:24] 2026-04-19 09:54:38,463 | INFO     | sum of square deviations: 1731102086439.1084
[2026-04-19 05:55:24] 2026-04-19 09:54:38,734 | INFO     | sum of deviations: 3723723330481.809
[2026-04-19 05:55:24] 2026-04-19 09:54:38,734 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:38,734 | INFO     | mean y: 2494023.0107102594
[2026-04-19 05:55:24] 2026-04-19 09:54:38,735 | INFO     | intersect: 2494023.0107102594
[2026-04-19 05:55:24] 2026-04-19 09:54:38,741 | INFO     | chi2: 11.161165002656215
[2026-04-19 05:55:24] 2026-04-19 09:54:38,746 | INFO     | sum of square deviations: 1716505972427.2603
[2026-04-19 05:55:24] 2026-04-19 09:54:39,436 | INFO     | sum of deviations: 4287420370710.4746
[2026-04-19 05:55:24] 2026-04-19 09:54:39,437 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:39,437 | INFO     | mean y: 2499912.3459581686
[2026-04-19 05:55:24] 2026-04-19 09:54:39,437 | INFO     | intersect: 2499912.3459581686
[2026-04-19 05:55:24] 2026-04-19 09:54:39,444 | INFO     | chi2: 7.617664203449516
[2026-04-19 05:55:24] 2026-04-19 09:54:39,444 | INFO     | current chi2=7.617664203449516 (change=31.74848502251683 %)
[2026-04-19 05:55:24] 2026-04-19 09:54:39,449 | INFO     | sum of square deviations: 1701992139027.8872
[2026-04-19 05:55:24] 2026-04-19 09:54:40,048 | INFO     | sum of deviations: 4270191196968.912
[2026-04-19 05:55:24] 2026-04-19 09:54:40,049 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:40,049 | INFO     | mean y: 2499731.3832199546
[2026-04-19 05:55:24] 2026-04-19 09:54:40,049 | INFO     | intersect: 2499731.3832199546
[2026-04-19 05:55:24] 2026-04-19 09:54:40,082 | INFO     | chi2: 7.615300402676094
[2026-04-19 05:55:24] 2026-04-19 09:54:40,082 | INFO     | current chi2=7.615300402676094 (change=0.031030519464905953 %)
[2026-04-19 05:55:24] 2026-04-19 09:54:40,082 | INFO     | right removable region: 1763
[2026-04-19 05:55:24] 2026-04-19 09:54:40,090 | INFO     | sum of square deviations: 1716504964707.2612
[2026-04-19 05:55:24] 2026-04-19 09:54:40,304 | INFO     | monitor loop #5430: job 0:7098075541 is in state 'finished'
[2026-04-19 05:55:24] 2026-04-19 09:54:40,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-19 05:55:24] 2026-04-19 09:54:41,600 | INFO     | sum of deviations: 3167532825732.7627
[2026-04-19 05:55:24] 2026-04-19 09:54:41,601 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:41,601 | INFO     | mean y: 2499832.4680610513
[2026-04-19 05:55:24] 2026-04-19 09:54:41,631 | INFO     | intersect: 2499832.4680610513
[2026-04-19 05:55:24] 2026-04-19 09:54:41,638 | INFO     | chi2: 7.695523988617467
[2026-04-19 05:55:24] 2026-04-19 09:54:41,638 | INFO     | current chi2=7.695523988617467 (change=31.050889519274826 %)
[2026-04-19 05:55:24] 2026-04-19 09:54:41,643 | INFO     | sum of square deviations: 1701990123587.8882
[2026-04-19 05:55:24] 2026-04-19 09:54:41,903 | INFO     | sum of deviations: 2766133159352.5806
[2026-04-19 05:55:24] 2026-04-19 09:54:41,903 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:41,904 | INFO     | mean y: 2504049.0810657595
[2026-04-19 05:55:24] 2026-04-19 09:54:41,904 | INFO     | intersect: 2504049.0810657595
[2026-04-19 05:55:24] 2026-04-19 09:54:41,910 | INFO     | chi2: 5.979986191254427
[2026-04-19 05:55:24] 2026-04-19 09:54:41,911 | INFO     | current chi2=5.979986191254427 (change=22.29267038736427 %)
[2026-04-19 05:55:24] 2026-04-19 09:54:41,911 | INFO     | left removable region: 10
[2026-04-19 05:55:24] 2026-04-19 09:54:41,916 | INFO     | sum of square deviations: 1670348171797.1816
[2026-04-19 05:55:24] 2026-04-19 09:54:42,175 | INFO     | sum of deviations: 3312584404388.4946
[2026-04-19 05:55:24] 2026-04-19 09:54:42,176 | INFO     | mean x (centered): 0.0
[2026-04-19 05:55:24] 2026-04-19 09:54:42,176 | INFO     | mean y: 2509822.2127780947
[2026-04-19 05:55:24] 2026-04-19 09:54:42,176 | INFO     | intersect: 2509822.2127780947
[2026-04-19 05:55:24] 2026-04-19 09:54:42,183 | INFO     | chi2: 2.403058547660238
[2026-04-19 05:55:24] 2026-04-19 09:54:42,183 | INFO     | current memory leak: 1.98 B/s (using 1753 data points, chi2=2.40)
[2026-04-19 05:55:24] 2026-04-19 09:54:42,186 | INFO     | could have reported an average CPU frequency of 3291 MHz (63 samples)
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | ..............................
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . Timing measurements:
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . get job = 1 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . initial setup = 39 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . payload setup = 61 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . stage-in = 0 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,187 | INFO     | . payload execution = 108187 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,188 | INFO     | . stage-out = 9 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,188 | INFO     | . log creation = 2 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,188 | INFO     | ..............................
[2026-04-19 05:55:24] 2026-04-19 09:54:42,625 | INFO     | 
[2026-04-19 05:55:24] 2026-04-19 09:54:42,655 | INFO     | job summary report
[2026-04-19 05:55:24] 2026-04-19 09:54:42,656 | INFO     | --------------------------------------------------
[2026-04-19 05:55:24] 2026-04-19 09:54:42,656 | INFO     | PanDA job id: 7098075541
[2026-04-19 05:55:24] 2026-04-19 09:54:42,656 | INFO     | task id: 49177127
[2026-04-19 05:55:24] 2026-04-19 09:54:42,656 | INFO     | errors: (none)
[2026-04-19 05:55:24] 2026-04-19 09:54:42,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | pilot state: finished 
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | transexitcode: 0
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | exeerrorcode: 0
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | exeerrordiag: 
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | exitcode: 0
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | exitmsg: OK
[2026-04-19 05:55:24] 2026-04-19 09:54:42,657 | INFO     | cpuconsumptiontime: 272735 s
[2026-04-19 05:55:24] 2026-04-19 09:54:42,658 | INFO     | nevents: 400
[2026-04-19 05:55:24] 2026-04-19 09:54:42,658 | INFO     | neventsw: 0
[2026-04-19 05:55:24] 2026-04-19 09:54:42,658 | INFO     | pid: 2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:42,658 | INFO     | pgrp: 2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:42,658 | INFO     | corecount: 8
[2026-04-19 05:55:24] 2026-04-19 09:54:42,659 | INFO     | event service: False
[2026-04-19 05:55:24] 2026-04-19 09:54:42,659 | INFO     | sizes: {0: 2280967, 1: 2281652, 2: 2266803, 3: 2283509, 14: 2283509, 108253: 2356279, 108254: 2356406, 108265: 2365460, 108268: 2365516, 108273: 2365710}
[2026-04-19 05:55:24] 2026-04-19 09:54:42,659 | INFO     | --------------------------------------------------
[2026-04-19 05:55:24] 2026-04-19 09:54:42,659 | INFO     | 
[2026-04-19 05:55:24] 2026-04-19 09:54:42,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-19 05:55:24] 2026-04-19 09:54:42,915 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,916 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,916 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,916 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,934 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-19 05:55:24] 2026-04-19 09:54:42,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-19 05:55:24] 2026-04-19 09:54:42,934 | INFO     | job 7098075541 has completed (purged errors)
[2026-04-19 05:55:24] 2026-04-19 09:54:42,935 | INFO     | overall cleanup function is called
[2026-04-19 05:55:24] 2026-04-19 09:54:43,952 | INFO     | --- collectZombieJob: --- 10, [2789106]
[2026-04-19 05:55:24] 2026-04-19 09:54:43,953 | INFO     | zombie collector waiting for pid 2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:43,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-19 05:55:24] 2026-04-19 09:54:43,953 | INFO     | collected zombie processes
[2026-04-19 05:55:24] 2026-04-19 09:54:43,954 | INFO     | will attempt to kill all subprocesses of pid=2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:44,605 | INFO     | PID=2781895 has CPU usage=33.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-19 05:55:24] 2026-04-19 09:54:44,606 | INFO     | .. there are 18 such processes running
[2026-04-19 05:55:24] 2026-04-19 09:54:45,102 | INFO     | process IDs to be killed: [2789106] (in reverse order)
[2026-04-19 05:55:24] 2026-04-19 09:54:46,231 | WARNING  | found no corresponding commands to process id(s)
[2026-04-19 05:55:24] 2026-04-19 09:54:46,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-19 05:55:24] 2026-04-19 09:54:46,261 | INFO     | did not find any defunct processes belonging to 2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:46,290 | INFO     | did not find any defunct processes belonging to 2789106
[2026-04-19 05:55:24] 2026-04-19 09:54:46,291 | INFO     | Ready for new job
[2026-04-19 05:55:24] 2026-04-19 09:54:46,362 | INFO     | **************************************
[2026-04-19 05:55:24] 2026-04-19 09:54:46,363 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-19 05:55:24] 2026-04-19 09:54:46,363 | INFO     | **************************************
[2026-04-19 05:55:24] 2026-04-19 09:54:46,363 | INFO     | 
[2026-04-19 05:55:24] 2026-04-19 09:54:46,436 | INFO     | architecture information:
[2026-04-19 05:55:24] 2026-04-19 09:54:46,464 | INFO     | executing command: cat /etc/os-release
[2026-04-19 05:55:24] 2026-04-19 09:54:46,687 | INFO     | cat /etc/os-release:
[2026-04-19 05:55:24] NAME="CentOS Linux"
[2026-04-19 05:55:24] VERSION="7 (Core)"
[2026-04-19 05:55:24] ID="centos"
[2026-04-19 05:55:24] ID_LIKE="rhel fedora"
[2026-04-19 05:55:24] VERSION_ID="7"
[2026-04-19 05:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-19 05:55:24] ANSI_COLOR="0;31"
[2026-04-19 05:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-19 05:55:24] HOME_URL="https://www.centos.org/"
[2026-04-19 05:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-19 05:55:24] 
[2026-04-19 05:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-19 05:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-19 05:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-19 05:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-19 05:55:24] 
[2026-04-19 05:55:24] 2026-04-19 09:54:46,688 | INFO     | **************************************
[2026-04-19 05:55:24] 2026-04-19 09:54:47,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-19 05:55:24] 2026-04-19 09:54:47,548 | INFO     | sufficient remaining disk space (84222672896 B)
[2026-04-19 05:55:24] 2026-04-19 09:54:47,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-19 05:55:24] 2026-04-19 09:54:47,549 | INFO     | current server update state: UPDATING_FINAL
[2026-04-19 05:55:24] 2026-04-19 09:54:47,549 | INFO     | update_server=False
[2026-04-19 05:55:24] 2026-04-19 09:54:47,549 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-19 05:55:24] 2026-04-19 09:54:47,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-19 05:55:24] 2026-04-19 09:54:47,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-19 05:55:24] 2026-04-19 09:54:47,838 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-19 05:55:24] 2026-04-19 09:54:47,839 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-19 05:55:24] 2026-04-19 09:54:47,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-19 05:55:24] 2026-04-19 09:54:47,839 | INFO     | will abort loop
[2026-04-19 05:55:24] 2026-04-19 09:54:48,043 | INFO     | all data control threads have been joined
[2026-04-19 05:55:24] 2026-04-19 09:54:48,262 | INFO     | all payload control threads have been joined
[2026-04-19 05:55:24] 2026-04-19 09:54:48,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-19 05:55:24] 2026-04-19 09:54:48,556 | INFO     | [job] retrieve thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:48,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:48,619 | INFO     | [job] queue monitor thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:48,846 | INFO     | [job] job monitor thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:48,961 | INFO     | all job control threads have been joined
[2026-04-19 05:55:24] 2026-04-19 09:54:49,050 | INFO     | [data] control thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,172 | INFO     | [job] validate thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,174 | INFO     | [payload] validate_pre thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,176 | INFO     | [data] copytool_in thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,269 | INFO     | [payload] control thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,436 | INFO     | [payload] failed_post thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,453 | INFO     | [payload] validate_post thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,607 | INFO     | [data] copytool_out thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,927 | INFO     | [payload] execute_payloads thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:49,967 | INFO     | [job] control thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:50,041 | INFO     | [job] create_data_payload thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:54:52,437 | INFO     | [data] queue_monitor thread has finished
[2026-04-19 05:55:24] 2026-04-19 09:55:11,474 | INFO     | [monitor] cgroup control has ended
[2026-04-19 05:55:24] 2026-04-19 09:55:11,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248869431104)>', '<ExcThread(monitor, started 140248516384512)>']
[2026-04-19 05:55:24] 2026-04-19 09:55:16,719 | INFO     | all workflow threads have been joined
[2026-04-19 05:55:24] 2026-04-19 09:55:16,780 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-19 05:55:24] 2026-04-19 09:55:16,780 | INFO     | traces error code: 0
[2026-04-19 05:55:24] 2026-04-19 09:55:16,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-19 05:55:24] 2026-04-19 09:55:20,351 | INFO     | PID=2781895 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-19 05:55:24] 2026-04-19 09:55:20,352 | INFO     | .. there are 18 such processes running
[2026-04-19 05:55:24] 2026-04-19 09:55:20,352 | INFO     | found 0 job(s) in 20 queues
[2026-04-19 05:55:24] 2026-04-19 09:55:20,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-19 05:55:24] 2026-04-19 09:55:20,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-19 05:55:24] 2026-04-19 09:55:20,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-19 05:55:24] 2026-04-19 09:55:20,353 | INFO     | [monitor] control thread has ended
[2026-04-19 05:55:24] 2026-04-19 09:55:20,954 [wrapper] ==== pilot stdout END ====
[2026-04-19 05:55:24] 2026-04-19 09:55:21,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-19 05:55:24] 2026-04-19 09:55:21,085 [wrapper] pilotpid: 2781895
[2026-04-19 05:55:24] 2026-04-19 09:55:21,169 [wrapper] Pilot exit status: 0
[2026-04-19 05:55:24] 2026-04-19 09:55:21,282 [wrapper] pandaids: 7098075541
[2026-04-19 05:55:24] 2026-04-19 09:55:22,516 [wrapper] cleanup supervisor_pilot 1293710 2781896
[2026-04-19 05:55:24] 2026-04-19 09:55:22,581 [wrapper] Test setup, not cleaning
[2026-04-19 05:55:24] 2026-04-19 09:55:22,648 [wrapper] apfmon messages muted
[2026-04-19 05:55:24] 2026-04-19 09:55:22,705 [wrapper] ==== wrapper stdout END ====
[2026-04-19 05:55:24] 2026-04-19 09:55:22,797 [wrapper] ==== wrapper stderr END ====
[2026-04-19 05:55:24]  *** Error codes and diagnostics ***
[2026-04-19 05:55:24]     "exeErrorCode": 0,
[2026-04-19 05:55:24]     "pilotErrorCode": 0,
[2026-04-19 05:55:24]  *** Listing of results directory ***
[2026-04-19 05:55:24] total 498064
[2026-04-19 05:55:24] -rwx------. 1 boincer umatlas     36322 Apr 16 12:01 runpilot2-wrapper.sh
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas    644190 Apr 16 12:02 pilot3.tar.gz
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas      5094 Apr 16 12:10 queuedata.json
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas       100 Apr 17 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-19 05:55:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 23:48 run_atlas
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas       105 Apr 17 23:48 job.xml
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas 240142337 Apr 17 23:48 EVNT.49136573._000022.pool.root.1
[2026-04-19 05:55:24] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 23:48 shared
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas    656938 Apr 17 23:48 input.tar.gz
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 23:48 start_atlas.sh
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas         0 Apr 17 23:48 boinc_lockfile
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas      2603 Apr 17 23:48 pandaJob.out
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas        57 Apr 17 23:48 setup.sh.local
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas    996998 Apr 17 23:49 agis_schedconf.cvmfs.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas       429 Apr 17 23:49 workernode_map.json
[2026-04-19 05:55:24] drwx------. 5 boincer umatlas      4096 Apr 17 23:49 pilot3
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas      6826 Apr 19 05:45 init_data.xml
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas 248328649 Apr 19 05:49 HITS.49177127._000956.pool.root.1
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas       489 Apr 19 05:49 boinc_task_state.xml
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas      1045 Apr 19 05:54 memory_monitor_summary.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas   1512404 Apr 19 05:54 agis_ddmendpoints.agis.ALL.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas   1114050 Apr 19 05:54 log.49177127._000956.job.log.tgz.1
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas        95 Apr 19 05:54 pilot_heartbeat.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas      6356 Apr 19 05:54 heartbeat_new.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas      6247 Apr 19 05:54 heartbeat.json
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas       823 Apr 19 05:55 pilotlog.txt
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas   7629294 Apr 19 05:55 log.49177127._000956.job.log.1
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas       357 Apr 19 05:55 output.list
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 05:55 boinc_mmap_file
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas        29 Apr 19 05:55 wrapper_checkpoint.txt
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas       410 Apr 19 05:55 runtime_log
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas   8765440 Apr 19 05:55 result.tar.gz
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas      8965 Apr 19 05:55 runtime_log.err
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas       663 Apr 19 05:55 07baff973f18.diag
[2026-04-19 05:55:24] -rw-r--r--. 1 boincer umatlas     21214 Apr 19 05:55 stderr.txt
[2026-04-19 05:55:24] HITS file was successfully produced:
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas 248328649 Apr 19 05:49 shared/HITS.pool.root.1
[2026-04-19 05:55:24]  *** Contents of shared directory: ***
[2026-04-19 05:55:24] total 486252
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas 240142337 Apr 17 23:48 ATLAS.root_0
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas    656938 Apr 17 23:48 input.tar.gz
[2026-04-19 05:55:24] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 23:48 start_atlas.sh
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas 248328649 Apr 19 05:49 HITS.pool.root.1
[2026-04-19 05:55:24] -rw-------. 1 boincer umatlas   8765440 Apr 19 05:55 result.tar.gz
05:55:26 (2776975): run_atlas exited; CPU time 278000.259101
05:55:26 (2776975): called boinc_finish(0)

</stderr_txt>
]]>

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