Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:58 (296248): wrapper (7.7.26015): starting
05:40:58 (296248): wrapper: running run_atlas (--nthreads 3)
[2026-04-18 05:40:58] Arguments: --nthreads 3
[2026-04-18 05:40:58] Threads: 3
[2026-04-18 05:40:58] Checking for CVMFS
[2026-04-18 05:40:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-18 05:41:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-18 05:41:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-18 05:41:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-18 05:41:00] 2.9.2.0 296447 0 29192 158565 3 1 11171564 36864000 0 130560 0 0 0.000 1282 47481 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-18 05:41:00] CVMFS is ok
[2026-04-18 05:41:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-18 05:41:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-18 05:41:00] Further information can be found at the LHC@home message board.
[2026-04-18 05:41:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-18 05:41:00] Checking for apptainer binary...
[2026-04-18 05:41:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-18 05:41:00] Running /usr/bin/apptainer --version
[2026-04-18 05:41:00] apptainer version 1.4.1-1.1
[2026-04-18 05:41:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-18 05:41:00] belleA259
[2026-04-18 05:41:00] apptainer works
[2026-04-18 05:41:00] Set ATHENA_PROC_NUMBER=3
[2026-04-18 05:41:00] Set ATHENA_CORE_NUMBER=3
[2026-04-18 05:41:00] Starting ATLAS job with PandaID=7092903096
[2026-04-18 05:41:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 07:04:23]  *** The last 200 lines of the pilot log: ***
[2026-04-18 07:04:23] 2026-04-18 05:03:58,287 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 07:04:23] 2026-04-18 05:03:58,300 | INFO     | sufficient remaining disk space (350736089088 B)
[2026-04-18 07:04:23] 2026-04-18 05:03:58,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 07:04:23] 2026-04-18 05:03:58,300 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 07:04:23] 2026-04-18 05:03:58,300 | INFO     | update_server=False
[2026-04-18 07:04:23] 2026-04-18 05:03:58,300 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 07:04:23] 2026-04-18 05:03:58,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 07:04:23] 2026-04-18 05:03:58,477 | INFO     | all job control threads have been joined
[2026-04-18 07:04:23] 2026-04-18 05:03:59,018 | INFO     | all payload control threads have been joined
[2026-04-18 07:04:23] 2026-04-18 05:03:59,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 07:04:23] 2026-04-18 05:03:59,176 | INFO     | all data control threads have been joined
[2026-04-18 07:04:23] 2026-04-18 05:03:59,306 | INFO     | [job] retrieve thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:03:59,306 | INFO     | [job] queue monitor thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:03:59,361 | INFO     | [data] copytool_in thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:03:59,445 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:03:59,483 | INFO     | [job] control thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:03:59,665 | INFO     | [payload] validate_post thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,023 | INFO     | [payload] control thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,181 | INFO     | [data] control thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,516 | INFO     | [payload] failed_post thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,676 | INFO     | [job] validate thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,724 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:00,746 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:01,120 | INFO     | [data] copytool_out thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:01,371 | WARNING  | process 304993 can no longer be monitored (due to stat problems) - aborting
[2026-04-18 07:04:23] 2026-04-18 05:04:01,408 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 07:04:23] 2026-04-18 05:04:01,408 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 07:04:23] 2026-04-18 05:04:01,409 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-18 07:04:23] 2026-04-18 05:04:01,409 | WARNING  | maxPSS not found in memory monitor output
[2026-04-18 07:04:23] 2026-04-18 05:04:01,409 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7092903096/payload.stdout) since it has not been created yet
[2026-04-18 07:04:23] 2026-04-18 05:04:01,409 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-18 07:04:23] 2026-04-18 05:04:01,419 | INFO     | sufficient remaining disk space (350736089088 B)
[2026-04-18 07:04:23] 2026-04-18 05:04:01,419 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-18 07:04:23] 2026-04-18 05:04:01,419 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7092903096/HITS.49545114._014028.pool.root.1 since it does not exist
[2026-04-18 07:04:23] 2026-04-18 05:04:01,469 | INFO     | number of running child processes to parent process 304993: 1
[2026-04-18 07:04:23] 2026-04-18 05:04:01,469 | INFO     | maximum number of monitored processes: 6
[2026-04-18 07:04:23] 2026-04-18 05:04:01,469 | INFO     | aborting job monitoring since job object (job id=7092903096) has expired
[2026-04-18 07:04:23] 2026-04-18 05:04:01,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 07:04:23] 2026-04-18 05:04:01,469 | INFO     | will abort loop
[2026-04-18 07:04:23] 2026-04-18 05:04:02,308 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:02,475 | INFO     | [job] job monitor thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:08,446 | INFO     | job.realtimelogging is not enabled
[2026-04-18 07:04:23] 2026-04-18 05:04:09,452 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 07:04:23] 2026-04-18 05:04:17,579 | INFO     | [monitor] cgroup control has ended
[2026-04-18 07:04:23] 2026-04-18 05:04:18,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681022785344)>', '<ExcThread(monitor, started 140680672290560)>']
[2026-04-18 07:04:23] 2026-04-18 05:04:19,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 07:04:23] 2026-04-18 05:04:19,413 | INFO     | [monitor] control thread has ended
[2026-04-18 07:04:23] 2026-04-18 05:04:23,505 | INFO     | all workflow threads have been joined
[2026-04-18 07:04:23] 2026-04-18 05:04:23,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 07:04:23] 2026-04-18 05:04:23,506 | INFO     | traces error code: 0
[2026-04-18 07:04:23] 2026-04-18 05:04:23,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 07:04:23] 2026-04-18 05:04:23,555 [wrapper] ==== pilot stdout END ====
[2026-04-18 07:04:23] 2026-04-18 05:04:23,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 07:04:23] 2026-04-18 05:04:23,560 [wrapper] pilotpid: 300544
[2026-04-18 07:04:23] 2026-04-18 05:04:23,562 [wrapper] Pilot exit status: 0
[2026-04-18 07:04:23] 2026-04-18 05:04:23,571 [wrapper] pandaids: 7092903096
[2026-04-18 07:04:23] 2026-04-18 05:04:23,589 [wrapper] cleanup supervisor_pilot  314796 300545
[2026-04-18 07:04:23] 2026-04-18 05:04:23,591 [wrapper] Test setup, not cleaning
[2026-04-18 07:04:23] 2026-04-18 05:04:23,594 [wrapper] apfmon messages muted
[2026-04-18 07:04:23] 2026-04-18 05:04:23,596 [wrapper] ==== wrapper stdout END ====
[2026-04-18 07:04:23] 2026-04-18 05:04:23,599 [wrapper] ==== wrapper stderr END ====
[2026-04-18 07:04:23]  *** Error codes and diagnostics ***
[2026-04-18 07:04:23]     "exeErrorCode": 0,
[2026-04-18 07:04:23]     "pilotErrorCode": 0,
[2026-04-18 07:04:23]  *** Listing of results directory ***
[2026-04-18 07:04:23] total 461648
[2026-04-18 07:04:23] -rwx------ 1 boinc boinc     36322 Apr 16 18:03 runpilot2-wrapper.sh
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      5094 Apr 17 10:44 queuedata.json
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc    644190 Apr 17 10:44 pilot3.tar.gz
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc       100 Apr 18 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 07:04:23] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 05:40 run_atlas
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc       105 Apr 18 05:40 job.xml
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc 279065159 Apr 18 05:40 EVNT.49539591._000562.pool.root.1
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc    656934 Apr 18 05:40 input.tar.gz
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc     15665 Apr 18 05:40 start_atlas.sh
[2026-04-18 07:04:23] drwxrwx--x 2 boinc boinc      4096 Apr 18 05:40 shared
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc         0 Apr 18 05:40 boinc_setup_complete
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      6362 Apr 18 05:40 init_data.xml
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc         0 Apr 18 05:40 boinc_lockfile
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      2604 Apr 18 05:41 pandaJob.out
[2026-04-18 07:04:23] -rw------- 1 boinc boinc    996998 Apr 18 05:41 agis_schedconf.cvmfs.json
[2026-04-18 07:04:23] -rw------- 1 boinc boinc   1512404 Apr 18 05:41 agis_ddmendpoints.agis.ALL.json
[2026-04-18 07:04:23] -rw------- 1 boinc boinc       426 Apr 18 05:41 workernode_map.json
[2026-04-18 07:04:23] drwx------ 5 boinc boinc      4096 Apr 18 05:41 pilot3
[2026-04-18 07:04:23] -rw------- 1 boinc boinc        95 Apr 18 07:03 pilot_heartbeat.json
[2026-04-18 07:04:23] -rw------- 1 boinc boinc 188209354 Apr 18 07:03 HITS.49545114._014028.pool.root.1
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc       487 Apr 18 07:03 boinc_task_state.xml
[2026-04-18 07:04:23] -rw------- 1 boinc boinc      1013 Apr 18 07:03 memory_monitor_summary.json
[2026-04-18 07:04:23] -rw------- 1 boinc boinc    217778 Apr 18 07:03 log.49545114._014028.job.log.tgz.1
[2026-04-18 07:04:23] -rw------- 1 boinc boinc      6321 Apr 18 07:03 heartbeat_new.json
[2026-04-18 07:04:23] -rw------- 1 boinc boinc      6212 Apr 18 07:03 heartbeat.json
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      8192 Apr 18 07:04 boinc_mmap_file
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc        27 Apr 18 07:04 wrapper_checkpoint.txt
[2026-04-18 07:04:23] -rw------- 1 boinc boinc      6122 Apr 18 07:04 pilotlog.txt
[2026-04-18 07:04:23] -rw------- 1 boinc boinc    485217 Apr 18 07:04 log.49545114._014028.job.log.1
[2026-04-18 07:04:23] -rw------- 1 boinc boinc       357 Apr 18 07:04 output.list
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc       410 Apr 18 07:04 runtime_log
[2026-04-18 07:04:23] -rw------- 1 boinc boinc    716800 Apr 18 07:04 result.tar.gz
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      8533 Apr 18 07:04 runtime_log.err
[2026-04-18 07:04:23] -rw------- 1 boinc boinc       660 Apr 18 07:04 0848067c2426.diag
[2026-04-18 07:04:23] -rw-r--r-- 1 boinc boinc      9555 Apr 18 07:04 stderr.txt
[2026-04-18 07:04:23] HITS file was successfully produced:
[2026-04-18 07:04:23] -rw------- 1 boinc boinc 188209354 Apr 18 07:03 shared/HITS.pool.root.1
[2026-04-18 07:04:23]  *** Contents of shared directory: ***
[2026-04-18 07:04:23] total 457696
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc 279065159 Apr 18 05:40 ATLAS.root_0
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc    656934 Apr 18 05:40 input.tar.gz
[2026-04-18 07:04:23] -rw-r--r-- 2 boinc boinc     15665 Apr 18 05:40 start_atlas.sh
[2026-04-18 07:04:23] -rw------- 1 boinc boinc 188209354 Apr 18 07:03 HITS.pool.root.1
[2026-04-18 07:04:23] -rw------- 1 boinc boinc    716800 Apr 18 07:04 result.tar.gz
07:04:45 (296248): run_atlas exited; CPU time 13914.865358
07:04:45 (296248): called boinc_finish(0)

</stderr_txt>
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