Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:39:18 (3819952): wrapper (7.7.26015): starting
23:39:18 (3819952): wrapper: running run_atlas (--nthreads 12)
[2026-04-17 23:39:18] Arguments: --nthreads 12
[2026-04-17 23:39:18] Threads: 12
[2026-04-17 23:39:18] Checking for CVMFS
[2026-04-17 23:39:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-17 23:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-17 23:39:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-17 23:39:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-17 23:39:21] 2.13.3.0 9105 163406 632988 158565 1 889 33675965 39288832 19925 16776704 0 352422634 99.597 441525609 30649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-17 23:39:21] CVMFS is ok
[2026-04-17 23:39:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-17 23:39:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-17 23:39:21] Further information can be found at the LHC@home message board.
[2026-04-17 23:39:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-17 23:39:21] Checking for apptainer binary...
[2026-04-17 23:39:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-17 23:39:21] Running /usr/bin/apptainer --version
[2026-04-17 23:39:21] apptainer version 1.4.5-2.el9
[2026-04-17 23:39:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-17 23:39:22] c-211-21.aglt2.org
[2026-04-17 23:39:22] apptainer works
[2026-04-17 23:39:22] Set ATHENA_PROC_NUMBER=12
[2026-04-17 23:39:22] Set ATHENA_CORE_NUMBER=12
[2026-04-17 23:39:22] Starting ATLAS job with PandaID=7094196952
[2026-04-17 23:39:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 14:11:01]  *** The last 200 lines of the pilot log: ***
[2026-04-18 14:11:01] 2026-04-18 18:09:57,758 | INFO     | mean y: 2714166.4407971865
[2026-04-18 14:11:01] 2026-04-18 18:09:57,759 | INFO     | intersect: 2714166.4407971865
[2026-04-18 14:11:01] 2026-04-18 18:09:57,760 | INFO     | chi2: 2.5910351675397756
[2026-04-18 14:11:01] 2026-04-18 18:09:57,761 | INFO     | sum of square deviations: 189079250775.43277
[2026-04-18 14:11:01] 2026-04-18 18:09:57,788 | INFO     | sum of deviations: 387758677384.3497
[2026-04-18 14:11:01] 2026-04-18 18:09:57,788 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,788 | INFO     | mean y: 2713981.5754716983
[2026-04-18 14:11:01] 2026-04-18 18:09:57,788 | INFO     | intersect: 2713981.5754716983
[2026-04-18 14:11:01] 2026-04-18 18:09:57,790 | INFO     | chi2: 2.590978081536795
[2026-04-18 14:11:01] 2026-04-18 18:09:57,790 | INFO     | current chi2=2.590978081536795 (change=0.002203212202438561 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,790 | INFO     | right removable region: 847
[2026-04-18 14:11:01] 2026-04-18 18:09:57,791 | INFO     | sum of square deviations: 189078697923.75464
[2026-04-18 14:11:01] 2026-04-18 18:09:57,817 | INFO     | sum of deviations: 166870511143.70282
[2026-04-18 14:11:01] 2026-04-18 18:09:57,817 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,817 | INFO     | mean y: 2724348.8549528304
[2026-04-18 14:11:01] 2026-04-18 18:09:57,817 | INFO     | intersect: 2724348.8549528304
[2026-04-18 14:11:01] 2026-04-18 18:09:57,819 | INFO     | chi2: 0.17955930078122506
[2026-04-18 14:11:01] 2026-04-18 18:09:57,819 | INFO     | current chi2=0.17955930078122506 (change=93.06997824534666 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,820 | INFO     | sum of square deviations: 185753294869.5042
[2026-04-18 14:11:01] 2026-04-18 18:09:57,841 | INFO     | sum of deviations: 124148581602.53015
[2026-04-18 14:11:01] 2026-04-18 18:09:57,841 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,842 | INFO     | mean y: 2726305.074733096
[2026-04-18 14:11:01] 2026-04-18 18:09:57,842 | INFO     | intersect: 2726305.074733096
[2026-04-18 14:11:01] 2026-04-18 18:09:57,843 | INFO     | chi2: 0.09616499341554843
[2026-04-18 14:11:01] 2026-04-18 18:09:57,843 | INFO     | current chi2=0.09616499341554843 (change=46.44388065828136 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,844 | INFO     | sum of square deviations: 182467101974.64096
[2026-04-18 14:11:01] 2026-04-18 18:09:57,864 | INFO     | sum of deviations: 127945544964.75778
[2026-04-18 14:11:01] 2026-04-18 18:09:57,864 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,864 | INFO     | mean y: 2726125.5238663484
[2026-04-18 14:11:01] 2026-04-18 18:09:57,865 | INFO     | intersect: 2726125.5238663484
[2026-04-18 14:11:01] 2026-04-18 18:09:57,866 | INFO     | chi2: 0.07099585170922626
[2026-04-18 14:11:01] 2026-04-18 18:09:57,866 | INFO     | current chi2=0.07099585170922626 (change=26.172873113567647 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,867 | INFO     | sum of square deviations: 179219937308.85226
[2026-04-18 14:11:01] 2026-04-18 18:09:57,890 | INFO     | sum of deviations: 147650499203.19116
[2026-04-18 14:11:01] 2026-04-18 18:09:57,890 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,890 | INFO     | mean y: 2725203.9147659065
[2026-04-18 14:11:01] 2026-04-18 18:09:57,890 | INFO     | intersect: 2725203.9147659065
[2026-04-18 14:11:01] 2026-04-18 18:09:57,892 | INFO     | chi2: 0.01731223567274434
[2026-04-18 14:11:01] 2026-04-18 18:09:57,892 | INFO     | current chi2=0.01731223567274434 (change=75.61514475007766 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,893 | INFO     | sum of square deviations: 176011568612.6803
[2026-04-18 14:11:01] 2026-04-18 18:09:57,916 | INFO     | sum of deviations: 136837923574.12317
[2026-04-18 14:11:01] 2026-04-18 18:09:57,916 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,916 | INFO     | mean y: 2725717.384057971
[2026-04-18 14:11:01] 2026-04-18 18:09:57,916 | INFO     | intersect: 2725717.384057971
[2026-04-18 14:11:01] 2026-04-18 18:09:57,917 | INFO     | chi2: 0.01393045793993571
[2026-04-18 14:11:01] 2026-04-18 18:09:57,918 | INFO     | current chi2=0.01393045793993571 (change=19.534032442342276 %)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,918 | INFO     | left removable region: 25
[2026-04-18 14:11:01] 2026-04-18 18:09:57,919 | INFO     | sum of square deviations: 172212877877.79187
[2026-04-18 14:11:01] 2026-04-18 18:09:57,941 | INFO     | sum of deviations: 134052649106.27753
[2026-04-18 14:11:01] 2026-04-18 18:09:57,942 | INFO     | mean x (centered): 0.0
[2026-04-18 14:11:01] 2026-04-18 18:09:57,942 | INFO     | mean y: 2725583.5255474453
[2026-04-18 14:11:01] 2026-04-18 18:09:57,942 | INFO     | intersect: 2725583.5255474453
[2026-04-18 14:11:01] 2026-04-18 18:09:57,943 | INFO     | chi2: 0.01372058218117587
[2026-04-18 14:11:01] 2026-04-18 18:09:57,943 | INFO     | current memory leak: 0.78 B/s (using 822 data points, chi2=0.01)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,944 | INFO     | could have reported an average CPU frequency of 2899 MHz (32 samples)
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | ..............................
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | . Timing measurements:
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | . get job = 0 s
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | . initial setup = 30 s
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | . payload setup = 67 s
[2026-04-18 14:11:01] 2026-04-18 18:09:57,945 | INFO     | . stage-in = 0 s
[2026-04-18 14:11:01] 2026-04-18 18:09:57,946 | INFO     | . payload execution = 52053 s
[2026-04-18 14:11:01] 2026-04-18 18:09:57,946 | INFO     | . stage-out = 5 s
[2026-04-18 14:11:02] 2026-04-18 18:09:57,946 | INFO     | . log creation = 1 s
[2026-04-18 14:11:02] 2026-04-18 18:09:57,946 | INFO     | ..............................
[2026-04-18 14:11:02] 2026-04-18 18:09:58,082 | INFO     | 
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | job summary report
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | --------------------------------------------------
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | PanDA job id: 7094196952
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | task id: 49545114
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | errors: (none)
[2026-04-18 14:11:02] 2026-04-18 18:09:58,083 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | pilot state: finished 
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | transexitcode: 0
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | exeerrorcode: 0
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | exeerrordiag: 
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | exitcode: 0
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | exitmsg: OK
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | cpuconsumptiontime: 77226 s
[2026-04-18 14:11:02] 2026-04-18 18:09:58,084 | INFO     | nevents: 400
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | neventsw: 0
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | pid: 3860059
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | pgrp: 3860059
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | corecount: 12
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | event service: False
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | sizes: {0: 2281020, 1: 2281705, 2: 2281705, 3: 2283506, 4: 2283562, 52126: 2329309, 52133: 2338307, 52135: 2338557}
[2026-04-18 14:11:02] 2026-04-18 18:09:58,085 | INFO     | --------------------------------------------------
[2026-04-18 14:11:02] 2026-04-18 18:09:58,086 | INFO     | 
[2026-04-18 14:11:02] 2026-04-18 18:09:58,086 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 14:11:02] 2026-04-18 18:09:58,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 14:11:02] 2026-04-18 18:09:58,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,117 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 14:11:02] 2026-04-18 18:09:58,118 | INFO     | job 7094196952 has completed (purged errors)
[2026-04-18 14:11:02] 2026-04-18 18:09:58,120 | INFO     | overall cleanup function is called
[2026-04-18 14:11:02] 2026-04-18 18:09:59,146 | INFO     | --- collectZombieJob: --- 10, [3860059]
[2026-04-18 14:11:02] 2026-04-18 18:09:59,146 | INFO     | zombie collector waiting for pid 3860059
[2026-04-18 14:11:02] 2026-04-18 18:09:59,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 14:11:02] 2026-04-18 18:09:59,147 | INFO     | collected zombie processes
[2026-04-18 14:11:02] 2026-04-18 18:09:59,147 | INFO     | will attempt to kill all subprocesses of pid=3860059
[2026-04-18 14:11:02] 2026-04-18 18:10:02,354 | INFO     | process IDs to be killed: [3860059] (in reverse order)
[2026-04-18 14:11:02] 2026-04-18 18:10:02,927 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 14:11:02] 2026-04-18 18:10:02,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 14:11:02] 2026-04-18 18:10:02,957 | INFO     | did not find any defunct processes belonging to 3860059
[2026-04-18 14:11:02] 2026-04-18 18:10:02,977 | INFO     | did not find any defunct processes belonging to 3860059
[2026-04-18 14:11:02] 2026-04-18 18:10:02,978 | INFO     | Ready for new job
[2026-04-18 14:11:02] 2026-04-18 18:10:02,980 | INFO     | **************************************
[2026-04-18 14:11:02] 2026-04-18 18:10:02,981 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 14:11:02] 2026-04-18 18:10:02,981 | INFO     | **************************************
[2026-04-18 14:11:02] 2026-04-18 18:10:02,981 | INFO     | 
[2026-04-18 14:11:02] 2026-04-18 18:10:03,011 | INFO     | architecture information:
[2026-04-18 14:11:02] 2026-04-18 18:10:03,013 | INFO     | executing command: cat /etc/os-release
[2026-04-18 14:11:02] 2026-04-18 18:10:03,108 | INFO     | cat /etc/os-release:
[2026-04-18 14:11:02] NAME="CentOS Linux"
[2026-04-18 14:11:02] VERSION="7 (Core)"
[2026-04-18 14:11:02] ID="centos"
[2026-04-18 14:11:02] ID_LIKE="rhel fedora"
[2026-04-18 14:11:02] VERSION_ID="7"
[2026-04-18 14:11:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 14:11:02] ANSI_COLOR="0;31"
[2026-04-18 14:11:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 14:11:02] HOME_URL="https://www.centos.org/"
[2026-04-18 14:11:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 14:11:02] 
[2026-04-18 14:11:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 14:11:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 14:11:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 14:11:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 14:11:02] 
[2026-04-18 14:11:02] 2026-04-18 18:10:03,118 | INFO     | **************************************
[2026-04-18 14:11:02] 2026-04-18 18:10:03,627 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 14:11:02] 2026-04-18 18:10:03,738 | INFO     | sufficient remaining disk space (51884589056 B)
[2026-04-18 14:11:02] 2026-04-18 18:10:03,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 14:11:02] 2026-04-18 18:10:03,739 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 14:11:02] 2026-04-18 18:10:03,739 | INFO     | update_server=False
[2026-04-18 14:11:02] 2026-04-18 18:10:03,739 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 14:11:02] 2026-04-18 18:10:03,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 14:11:02] 2026-04-18 18:10:03,739 | INFO     | aborting loop
[2026-04-18 14:11:02] 2026-04-18 18:10:03,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 14:11:02] 2026-04-18 18:10:03,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 14:11:02] 2026-04-18 18:10:04,104 | INFO     | all job control threads have been joined
[2026-04-18 14:11:02] 2026-04-18 18:10:04,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 14:11:02] 2026-04-18 18:10:04,641 | INFO     | all payload control threads have been joined
[2026-04-18 14:11:02] 2026-04-18 18:10:04,737 | INFO     | all data control threads have been joined
[2026-04-18 14:11:02] 2026-04-18 18:10:04,744 | INFO     | [job] retrieve thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:04,746 | INFO     | [job] queue monitor thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:04,749 | INFO     | [job] job monitor thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:04,814 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:04,892 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,110 | INFO     | [job] control thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,116 | INFO     | [data] copytool_in thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,287 | INFO     | [payload] validate_post thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,587 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,589 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,593 | INFO     | [job] validate thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,647 | INFO     | [payload] control thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,743 | INFO     | [data] control thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:05,912 | INFO     | [payload] failed_post thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:06,227 | INFO     | [data] copytool_out thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:07,757 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 14:11:02] 2026-04-18 18:10:30,972 | INFO     | PID=3836563 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-18 14:11:02] 2026-04-18 18:10:30,973 | INFO     | .. there are 40 such processes running
[2026-04-18 14:11:02] 2026-04-18 18:10:30,974 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 14:11:02] 2026-04-18 18:10:30,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 14:11:02] 2026-04-18 18:10:30,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 14:11:02] 2026-04-18 18:10:39,533 [wrapper] supervise_pilot (15 min periods counter: 59)
[2026-04-18 14:11:02] 2026-04-18 18:10:54,718 | INFO     | [monitor] cgroup control has ended
[2026-04-18 14:11:02] 2026-04-18 18:10:54,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230206756672)>', '<ExcThread(monitor, started 140229658793728)>']
[2026-04-18 14:11:02] 2026-04-18 18:10:55,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 14:11:02] 2026-04-18 18:10:55,161 | INFO     | [monitor] control thread has ended
[2026-04-18 14:11:02] 2026-04-18 18:10:59,913 | INFO     | all workflow threads have been joined
[2026-04-18 14:11:02] 2026-04-18 18:10:59,913 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 14:11:02] 2026-04-18 18:10:59,914 | INFO     | traces error code: 0
[2026-04-18 14:11:02] 2026-04-18 18:10:59,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 14:11:02] 2026-04-18 18:11:00,895 [wrapper] ==== pilot stdout END ====
[2026-04-18 14:11:02] 2026-04-18 18:11:00,904 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 14:11:02] 2026-04-18 18:11:00,920 [wrapper] pilotpid: 3836563
[2026-04-18 14:11:02] 2026-04-18 18:11:00,924 [wrapper] Pilot exit status: 0
[2026-04-18 14:11:02] 2026-04-18 18:11:00,969 [wrapper] pandaids: 7094196952
[2026-04-18 14:11:02] 2026-04-18 18:11:01,133 [wrapper] cleanup supervisor_pilot   25683 3836564
[2026-04-18 14:11:02] 2026-04-18 18:11:01,150 [wrapper] Test setup, not cleaning
[2026-04-18 14:11:02] 2026-04-18 18:11:01,184 [wrapper] apfmon messages muted
[2026-04-18 14:11:02] 2026-04-18 18:11:01,204 [wrapper] ==== wrapper stdout END ====
[2026-04-18 14:11:02] 2026-04-18 18:11:01,210 [wrapper] ==== wrapper stderr END ====
[2026-04-18 14:11:02]  *** Error codes and diagnostics ***
[2026-04-18 14:11:02]     "exeErrorCode": 0,
[2026-04-18 14:11:02]     "pilotErrorCode": 0,
[2026-04-18 14:11:02]  *** Listing of results directory ***
[2026-04-18 14:11:02] total 460400
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas    644190 Apr 16 12:02 pilot3.tar.gz
[2026-04-18 14:11:02] -rwx------. 1 boincer umatlas     36322 Apr 16 12:02 runpilot2-wrapper.sh
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas      5094 Apr 16 12:13 queuedata.json
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas       100 Apr 17 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 14:11:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 23:39 run_atlas
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas       105 Apr 17 23:39 job.xml
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas 276437934 Apr 17 23:39 EVNT.49539591._000659.pool.root.1
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas    656929 Apr 17 23:39 input.tar.gz
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 23:39 start_atlas.sh
[2026-04-18 14:11:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 23:39 shared
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas         0 Apr 17 23:39 boinc_lockfile
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas      2604 Apr 17 23:39 pandaJob.out
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas        57 Apr 17 23:39 setup.sh.local
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas    996998 Apr 17 23:40 agis_schedconf.cvmfs.json
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas       442 Apr 17 23:40 workernode_map.json
[2026-04-18 14:11:02] drwx------. 5 boincer umatlas      4096 Apr 17 23:40 pilot3
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas 183285667 Apr 18 14:08 HITS.49545114._016627.pool.root.1
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas       489 Apr 18 14:09 boinc_task_state.xml
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas      1046 Apr 18 14:09 memory_monitor_summary.json
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas   1512404 Apr 18 14:09 agis_ddmendpoints.agis.ALL.json
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas    686968 Apr 18 14:09 log.49545114._016627.job.log.tgz.1
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas      6412 Apr 18 14:09 heartbeat_new.json
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas      6303 Apr 18 14:09 heartbeat.json
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas      6439 Apr 18 14:10 init_data.xml
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas        95 Apr 18 14:10 pilot_heartbeat.json
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 14:10 boinc_mmap_file
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas        28 Apr 18 14:10 wrapper_checkpoint.txt
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas      4819 Apr 18 14:10 pilotlog.txt
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas   3144225 Apr 18 14:11 log.49545114._016627.job.log.1
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas       357 Apr 18 14:11 output.list
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas       410 Apr 18 14:11 runtime_log
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas   3850240 Apr 18 14:11 result.tar.gz
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas      8966 Apr 18 14:11 runtime_log.err
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas       658 Apr 18 14:11 08163e213dcf.diag
[2026-04-18 14:11:02] -rw-r--r--. 1 boincer umatlas     20872 Apr 18 14:11 stderr.txt
[2026-04-18 14:11:02] HITS file was successfully produced:
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas 183285667 Apr 18 14:08 shared/HITS.pool.root.1
[2026-04-18 14:11:02]  *** Contents of shared directory: ***
[2026-04-18 14:11:02] total 453380
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas 276437934 Apr 17 23:39 ATLAS.root_0
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas    656929 Apr 17 23:39 input.tar.gz
[2026-04-18 14:11:02] -rw-r--r--. 2 boincer umatlas     15665 Apr 17 23:39 start_atlas.sh
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas 183285667 Apr 18 14:08 HITS.pool.root.1
[2026-04-18 14:11:02] -rw-------. 1 boincer umatlas   3850240 Apr 18 14:11 result.tar.gz
14:11:03 (3819952): run_atlas exited; CPU time 79692.448521
14:11:03 (3819952): called boinc_finish(0)

</stderr_txt>
]]>

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