Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:45:51 (8822): wrapper (7.7.26015): starting
22:45:51 (8822): wrapper: running run_atlas (--nthreads 8)
[2026-04-17 22:45:51] Arguments: --nthreads 8
[2026-04-17 22:45:51] Threads: 8
[2026-04-17 22:45:51] Checking for CVMFS
[2026-04-17 22:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-17 22:45:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-17 22:45:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-17 22:45:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-17 22:45:52] 2.11.2.0 2800 30218 78908 158565 3 188 19596761 20275200 1 130560 0 6297703 99.904 1306693 27836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-17 22:45:52] CVMFS is ok
[2026-04-17 22:45:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-17 22:45:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-17 22:45:52] Further information can be found at the LHC@home message board.
[2026-04-17 22:45:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-17 22:45:52] Checking for apptainer binary...
[2026-04-17 22:45:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-17 22:45:52] Running /usr/bin/apptainer --version
[2026-04-17 22:45:52] apptainer version 1.3.2-1.el7
[2026-04-17 22:45:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-17 22:45:54] c-204-3.aglt2.org
[2026-04-17 22:45:54] apptainer works
[2026-04-17 22:45:54] Set ATHENA_PROC_NUMBER=8
[2026-04-17 22:45:54] Set ATHENA_CORE_NUMBER=8
[2026-04-17 22:45:54] Starting ATLAS job with PandaID=7093478354
[2026-04-17 22:45:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-18 00:47:39]  *** The last 200 lines of the pilot log: ***
[2026-04-18 00:47:39] 2026-04-18 04:46:32,733 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7093478354/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 00:47:39] 2026-04-18 04:46:32,813 | INFO     | number of running child processes to parent process 17390: 1
[2026-04-18 00:47:39] 2026-04-18 04:46:32,813 | INFO     | maximum number of monitored processes: 6
[2026-04-18 00:47:39] 2026-04-18 04:46:33,075 | INFO     | job 7093478354 has state=finished
[2026-04-18 00:47:39] 2026-04-18 04:46:33,075 | INFO     | preparing for final server update for job 7093478354 in state='finished'
[2026-04-18 00:47:39] 2026-04-18 04:46:33,075 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7093478354/jobReport.json
[2026-04-18 00:47:39] 2026-04-18 04:46:33,078 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-18 00:47:39] 2026-04-18 04:46:33,079 | INFO     | this job has now completed (state=finished)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,079 | INFO     | log transfer has been attempted: DONE
[2026-04-18 00:47:39] 2026-04-18 04:46:33,079 | INFO     | job 7093478354 has finished - writing final server update
[2026-04-18 00:47:39] 2026-04-18 04:46:33,080 | INFO     | total number of processed events: 400 (read)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7093478354/memory_monitor_summary.json (trf name=prmon)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,083 | INFO     | extracted standard info from prmon json
[2026-04-18 00:47:39] 2026-04-18 04:46:33,083 | INFO     | extracted standard memory fields from prmon json
[2026-04-18 00:47:39] 2026-04-18 04:46:33,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-18 00:47:39] 2026-04-18 04:46:33,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-18 00:47:39] 2026-04-18 04:46:33,086 | INFO     | fitting pss+swap vs Time
[2026-04-18 00:47:39] 2026-04-18 04:46:33,086 | INFO     | sum of square deviations: 509440249.5
[2026-04-18 00:47:39] 2026-04-18 04:46:33,087 | INFO     | sum of deviations: -4342590213.5
[2026-04-18 00:47:39] 2026-04-18 04:46:33,087 | INFO     | mean x (centered): 0.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,087 | INFO     | mean y: 2659337.5
[2026-04-18 00:47:39] 2026-04-18 04:46:33,087 | INFO     | intersect: 2659337.5
[2026-04-18 00:47:39] 2026-04-18 04:46:33,087 | INFO     | chi2: 1.75290421639172
[2026-04-18 00:47:39] 2026-04-18 04:46:33,088 | INFO     | sum of square deviations: 447383272.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,088 | INFO     | sum of deviations: -2189706996.000003
[2026-04-18 00:47:39] 2026-04-18 04:46:33,088 | INFO     | mean x (centered): 0.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | mean y: 2664635.115044248
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | intersect: 2664635.115044248
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | chi2: 1.7543753187246272
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | current chi2=1.7543753187246272 (change=-0.08392371466453893 %)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | right removable region: 112
[2026-04-18 00:47:39] 2026-04-18 04:46:33,089 | INFO     | sum of square deviations: 447383272.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,090 | INFO     | sum of deviations: -24845037700.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,090 | INFO     | mean x (centered): 0.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,090 | INFO     | mean y: 2708861.053097345
[2026-04-18 00:47:39] 2026-04-18 04:46:33,090 | INFO     | intersect: 2708861.053097345
[2026-04-18 00:47:39] 2026-04-18 04:46:33,091 | INFO     | chi2: 0.1075568419755735
[2026-04-18 00:47:39] 2026-04-18 04:46:33,091 | INFO     | current chi2=0.1075568419755735 (change=93.86407762787093 %)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,091 | INFO     | sum of square deviations: 390582207.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,091 | INFO     | sum of deviations: -23923987475.999992
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | mean x (centered): 0.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | mean y: 2706355.962962963
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | intersect: 2706355.962962963
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | chi2: 0.09384745548388146
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | current chi2=0.09384745548388146 (change=12.746177964955018 %)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,092 | INFO     | left removable region: 10
[2026-04-18 00:47:39] 2026-04-18 04:46:33,093 | INFO     | sum of square deviations: 329031285.5
[2026-04-18 00:47:39] 2026-04-18 04:46:33,093 | INFO     | sum of deviations: -20621565145.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,093 | INFO     | mean x (centered): 0.0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,093 | INFO     | mean y: 2716190.901960784
[2026-04-18 00:47:39] 2026-04-18 04:46:33,094 | INFO     | intersect: 2716190.901960784
[2026-04-18 00:47:39] 2026-04-18 04:46:33,094 | INFO     | chi2: 0.09299787113281156
[2026-04-18 00:47:39] 2026-04-18 04:46:33,094 | INFO     | current memory leak: -62.67 B/s (using 102 data points, chi2=0.09)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,094 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,094 | INFO     | ..............................
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . Timing measurements:
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . get job = 0 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . initial setup = 8 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . payload setup = 18 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . stage-in = 0 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . payload execution = 7173 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . stage-out = 0 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | . log creation = 0 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,095 | INFO     | ..............................
[2026-04-18 00:47:39] 2026-04-18 04:46:33,180 | INFO     | 
[2026-04-18 00:47:39] 2026-04-18 04:46:33,180 | INFO     | job summary report
[2026-04-18 00:47:39] 2026-04-18 04:46:33,180 | INFO     | --------------------------------------------------
[2026-04-18 00:47:39] 2026-04-18 04:46:33,180 | INFO     | PanDA job id: 7093478354
[2026-04-18 00:47:39] 2026-04-18 04:46:33,181 | INFO     | task id: 49545114
[2026-04-18 00:47:39] 2026-04-18 04:46:33,181 | INFO     | errors: (none)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-18 00:47:39] 2026-04-18 04:46:33,181 | INFO     | pilot state: finished 
[2026-04-18 00:47:39] 2026-04-18 04:46:33,181 | INFO     | transexitcode: 0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | exeerrorcode: 0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | exeerrordiag: 
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | exitcode: 0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | exitmsg: OK
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | cpuconsumptiontime: 53988 s
[2026-04-18 00:47:39] 2026-04-18 04:46:33,182 | INFO     | nevents: 400
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | neventsw: 0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | pid: 17390
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | pgrp: 17390
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | corecount: 8
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | event service: False
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | sizes: {0: 2281906, 1: 2283480, 11: 2283508, 7194: 2310868, 7195: 2310867, 7196: 2319921, 7199: 2320299}
[2026-04-18 00:47:39] 2026-04-18 04:46:33,183 | INFO     | --------------------------------------------------
[2026-04-18 00:47:39] 2026-04-18 04:46:33,184 | INFO     | 
[2026-04-18 00:47:39] 2026-04-18 04:46:33,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-18 00:47:39] 2026-04-18 04:46:33,211 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,212 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,212 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,213 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,215 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,216 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-18 00:47:39] 2026-04-18 04:46:33,216 | INFO     | job 7093478354 has completed (purged errors)
[2026-04-18 00:47:39] 2026-04-18 04:46:33,216 | INFO     | overall cleanup function is called
[2026-04-18 00:47:39] 2026-04-18 04:46:34,225 | INFO     | --- collectZombieJob: --- 10, [17390]
[2026-04-18 00:47:39] 2026-04-18 04:46:34,225 | INFO     | zombie collector waiting for pid 17390
[2026-04-18 00:47:39] 2026-04-18 04:46:34,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-18 00:47:39] 2026-04-18 04:46:34,225 | INFO     | collected zombie processes
[2026-04-18 00:47:39] 2026-04-18 04:46:34,226 | INFO     | will attempt to kill all subprocesses of pid=17390
[2026-04-18 00:47:39] 2026-04-18 04:46:34,314 | INFO     | process IDs to be killed: [17390] (in reverse order)
[2026-04-18 00:47:39] 2026-04-18 04:46:34,369 | WARNING  | found no corresponding commands to process id(s)
[2026-04-18 00:47:39] 2026-04-18 04:46:34,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-18 00:47:39] 2026-04-18 04:46:34,375 | INFO     | did not find any defunct processes belonging to 17390
[2026-04-18 00:47:39] 2026-04-18 04:46:34,378 | INFO     | did not find any defunct processes belonging to 17390
[2026-04-18 00:47:39] 2026-04-18 04:46:34,378 | INFO     | Ready for new job
[2026-04-18 00:47:39] 2026-04-18 04:46:34,380 | INFO     | **************************************
[2026-04-18 00:47:39] 2026-04-18 04:46:34,380 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-18 00:47:39] 2026-04-18 04:46:34,380 | INFO     | **************************************
[2026-04-18 00:47:39] 2026-04-18 04:46:34,380 | INFO     | 
[2026-04-18 00:47:39] 2026-04-18 04:46:34,381 | INFO     | architecture information:
[2026-04-18 00:47:39] 2026-04-18 04:46:34,381 | INFO     | executing command: cat /etc/os-release
[2026-04-18 00:47:39] 2026-04-18 04:46:34,399 | INFO     | cat /etc/os-release:
[2026-04-18 00:47:39] NAME="CentOS Linux"
[2026-04-18 00:47:39] VERSION="7 (Core)"
[2026-04-18 00:47:39] ID="centos"
[2026-04-18 00:47:39] ID_LIKE="rhel fedora"
[2026-04-18 00:47:39] VERSION_ID="7"
[2026-04-18 00:47:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-18 00:47:39] ANSI_COLOR="0;31"
[2026-04-18 00:47:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-18 00:47:39] HOME_URL="https://www.centos.org/"
[2026-04-18 00:47:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-18 00:47:39] 
[2026-04-18 00:47:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-18 00:47:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-18 00:47:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-18 00:47:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-18 00:47:39] 
[2026-04-18 00:47:39] 2026-04-18 04:46:34,400 | INFO     | **************************************
[2026-04-18 00:47:39] 2026-04-18 04:46:34,903 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-18 00:47:39] 2026-04-18 04:46:34,923 | INFO     | sufficient remaining disk space (18430820352 B)
[2026-04-18 00:47:39] 2026-04-18 04:46:34,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-18 00:47:39] 2026-04-18 04:46:34,924 | INFO     | current server update state: UPDATING_FINAL
[2026-04-18 00:47:39] 2026-04-18 04:46:34,924 | INFO     | update_server=False
[2026-04-18 00:47:39] 2026-04-18 04:46:34,925 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-18 00:47:39] 2026-04-18 04:46:34,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-18 00:47:39] 2026-04-18 04:46:34,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-18 00:47:39] 2026-04-18 04:46:34,944 | INFO     | all data control threads have been joined
[2026-04-18 00:47:39] 2026-04-18 04:46:35,317 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-18 00:47:39] 2026-04-18 04:46:35,317 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-18 00:47:39] 2026-04-18 04:46:35,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-18 00:47:39] 2026-04-18 04:46:35,317 | INFO     | will abort loop
[2026-04-18 00:47:39] 2026-04-18 04:46:35,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-18 00:47:39] 2026-04-18 04:46:35,356 | INFO     | all payload control threads have been joined
[2026-04-18 00:47:39] 2026-04-18 04:46:35,928 | INFO     | [job] queue monitor thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:35,929 | INFO     | [job] retrieve thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:35,937 | INFO     | [payload] validate_post thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:35,950 | INFO     | [data] control thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:36,323 | INFO     | [job] job monitor thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:36,362 | INFO     | [payload] control thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:36,381 | INFO     | all job control threads have been joined
[2026-04-18 00:47:39] 2026-04-18 04:46:36,429 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:36,893 | INFO     | [payload] execute_payloads thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,003 | INFO     | [job] validate thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,033 | INFO     | [payload] failed_post thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,353 | INFO     | [data] copytool_out thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,386 | INFO     | [job] control thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,398 | INFO     | [data] copytool_in thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,412 | INFO     | [job] create_data_payload thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:37,431 | INFO     | [payload] validate_pre thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:46:38,932 | INFO     | [data] queue_monitor thread has finished
[2026-04-18 00:47:39] 2026-04-18 04:47:04,673 | INFO     | PID=12931 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-18 00:47:39] 2026-04-18 04:47:04,674 | INFO     | found 0 job(s) in 20 queues
[2026-04-18 00:47:39] 2026-04-18 04:47:04,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-18 00:47:39] 2026-04-18 04:47:04,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-18 00:47:39] 2026-04-18 04:47:33,807 | INFO     | [monitor] cgroup control has ended
[2026-04-18 00:47:39] 2026-04-18 04:47:34,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551654029120)>', '<ExcThread(monitor, started 140550925711104)>']
[2026-04-18 00:47:39] 2026-04-18 04:47:34,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-18 00:47:39] 2026-04-18 04:47:34,813 | INFO     | [monitor] control thread has ended
[2026-04-18 00:47:39] 2026-04-18 04:47:39,162 | INFO     | all workflow threads have been joined
[2026-04-18 00:47:39] 2026-04-18 04:47:39,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-18 00:47:39] 2026-04-18 04:47:39,167 | INFO     | traces error code: 0
[2026-04-18 00:47:39] 2026-04-18 04:47:39,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-18 00:47:39] 2026-04-18 04:47:39,296 [wrapper] ==== pilot stdout END ====
[2026-04-18 00:47:39] 2026-04-18 04:47:39,301 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-18 00:47:39] 2026-04-18 04:47:39,306 [wrapper] pilotpid: 12931
[2026-04-18 00:47:39] 2026-04-18 04:47:39,310 [wrapper] Pilot exit status: 0
[2026-04-18 00:47:39] 2026-04-18 04:47:39,328 [wrapper] pandaids: 7093478354
[2026-04-18 00:47:39] 2026-04-18 04:47:39,382 [wrapper] cleanup supervisor_pilot 28506 12932
[2026-04-18 00:47:39] 2026-04-18 04:47:39,387 [wrapper] Test setup, not cleaning
[2026-04-18 00:47:39] 2026-04-18 04:47:39,392 [wrapper] apfmon messages muted
[2026-04-18 00:47:39] 2026-04-18 04:47:39,397 [wrapper] ==== wrapper stdout END ====
[2026-04-18 00:47:39] 2026-04-18 04:47:39,402 [wrapper] ==== wrapper stderr END ====
[2026-04-18 00:47:39]  *** Error codes and diagnostics ***
[2026-04-18 00:47:39]     "exeErrorCode": 0,
[2026-04-18 00:47:39]     "pilotErrorCode": 0,
[2026-04-18 00:47:39]  *** Listing of results directory ***
[2026-04-18 00:47:39] total 461884
[2026-04-18 00:47:39] -rwx------ 1 boincer umatlas     36322 Apr 16 12:01 runpilot2-wrapper.sh
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas      5094 Apr 16 12:02 queuedata.json
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas    644190 Apr 16 12:02 pilot3.tar.gz
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas       100 Apr 17 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-18 00:47:39] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 22:45 run_atlas
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas       105 Apr 17 22:45 job.xml
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas 280825216 Apr 17 22:45 EVNT.49539591._000648.pool.root.1
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas     15665 Apr 17 22:45 start_atlas.sh
[2026-04-18 00:47:39] drwxrwx--x 2 boincer umatlas      4096 Apr 17 22:45 shared
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas    656927 Apr 17 22:45 input.tar.gz
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas         0 Apr 17 22:45 boinc_lockfile
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas      2605 Apr 17 22:45 pandaJob.out
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas        57 Apr 17 22:45 setup.sh.local
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas    996998 Apr 17 22:46 agis_schedconf.cvmfs.json
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas   1512404 Apr 17 22:46 agis_ddmendpoints.agis.ALL.json
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas       432 Apr 17 22:46 workernode_map.json
[2026-04-18 00:47:39] drwx------ 5 boincer umatlas      4096 Apr 17 22:46 pilot3
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas      5824 Apr 18 00:45 init_data.xml
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas 186075131 Apr 18 00:45 HITS.49545114._016198.pool.root.1
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas       487 Apr 18 00:46 boinc_task_state.xml
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas      1047 Apr 18 00:46 memory_monitor_summary.json
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas    339050 Apr 18 00:46 log.49545114._016198.job.log.tgz.1
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas      6433 Apr 18 00:46 heartbeat_new.json
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas      6324 Apr 18 00:46 heartbeat.json
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas        95 Apr 18 00:47 pilot_heartbeat.json
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 00:47 boinc_mmap_file
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas        27 Apr 18 00:47 wrapper_checkpoint.txt
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas      4927 Apr 18 00:47 pilotlog.txt
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas    670782 Apr 18 00:47 log.49545114._016198.job.log.1
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas       357 Apr 18 00:47 output.list
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas       410 Apr 18 00:47 runtime_log
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas   1024000 Apr 18 00:47 result.tar.gz
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas      8958 Apr 18 00:47 runtime_log.err
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas       658 Apr 18 00:47 07f12e8d08f8.diag
[2026-04-18 00:47:39] -rw-r--r-- 1 boincer umatlas     21165 Apr 18 00:47 stderr.txt
[2026-04-18 00:47:39] HITS file was successfully produced:
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas 186075131 Apr 18 00:45 shared/HITS.pool.root.1
[2026-04-18 00:47:39]  *** Contents of shared directory: ***
[2026-04-18 00:47:39] total 457620
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas 280825216 Apr 17 22:45 ATLAS.root_0
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas     15665 Apr 17 22:45 start_atlas.sh
[2026-04-18 00:47:39] -rw-r--r-- 2 boincer umatlas    656927 Apr 17 22:45 input.tar.gz
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas 186075131 Apr 18 00:45 HITS.pool.root.1
[2026-04-18 00:47:39] -rw------- 1 boincer umatlas   1024000 Apr 18 00:47 result.tar.gz
00:47:40 (8822): run_atlas exited; CPU time 53965.403928
00:47:40 (8822): called boinc_finish(0)

</stderr_txt>
]]>

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