Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-18 05:36:05 (2268): vboxwrapper version 26210
2026-04-18 05:36:05 (2268): BOINC client version: 8.2.8
2026-04-18 05:36:07 (2268): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-18 05:36:07 (2268): Successfully copied 'init_data.xml' to the shared directory.
2026-04-18 05:36:10 (2268): Create VM. (boinc_15cdb6e67b00267e, slot#3)
2026-04-18 05:36:12 (2268): Setting Memory Size for VM. (4200MB)
2026-04-18 05:36:12 (2268): Setting CPU Count for VM. (2)
2026-04-18 05:36:13 (2268): Setting Chipset Options for VM.
2026-04-18 05:36:13 (2268): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-18 05:36:13 (2268): Setting Boot Options for VM.
2026-04-18 05:36:14 (2268): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-18 05:36:14 (2268): Enabling VM Network Access.
2026-04-18 05:36:14 (2268): Disabling USB Support for VM.
2026-04-18 05:36:15 (2268): Disabling COM Port Support for VM.
2026-04-18 05:36:15 (2268): Disabling LPT Port Support for VM.
2026-04-18 05:36:15 (2268): Disabling Audio Support for VM.
2026-04-18 05:36:15 (2268): Disabling Clipboard Support for VM.
2026-04-18 05:36:16 (2268): Disabling Drag and Drop Support for VM.
2026-04-18 05:36:16 (2268): Adding storage controller(s) to VM.
2026-04-18 05:36:16 (2268): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-18 05:36:18 (2268): Adding VirtualBox Guest Additions to VM.
2026-04-18 05:36:19 (2268): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-18 05:36:19 (2268): forwarding host port 62635 to guest port 80
2026-04-18 05:36:19 (2268): Enabling remote desktop for VM.
2026-04-18 05:36:19 (2268): Required extension pack not installed, remote desktop not enabled.
2026-04-18 05:36:19 (2268): Enabling shared directory for VM.
2026-04-18 05:36:20 (2268): Starting VM using VBoxManage interface. (boinc_15cdb6e67b00267e, slot#3)
2026-04-18 05:36:28 (2268): Successfully started VM. (PID = '6504')
2026-04-18 05:36:28 (2268): Reporting VM Process ID to BOINC.
2026-04-18 05:36:28 (2268): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-18 05:36:28 (2268): Guest Log: CPUID EDX: 0x178bfbff
2026-04-18 05:36:28 (2268): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-18 05:36:28 (2268): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-18 05:36:28 (2268): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-18 05:36:28 (2268): Detected: Web Application Enabled (http://localhost:62635)
2026-04-18 05:36:28 (2268): Preference change detected
2026-04-18 05:36:28 (2268): Setting CPU throttle for VM. (100%)
2026-04-18 05:36:28 (2268): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-18 05:36:30 (2268): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-18 05:36:30 (2268): Guest Log: BIOS: Booting from Hard Disk...
2026-04-18 05:36:33 (2268): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-18 05:36:33 (2268): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-18 05:36:33 (2268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-18 05:36:39 (2268): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-18 05:36:39 (2268): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-18 05:36:49 (2268): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000237 main     Log opened 2026-04-18T05:36:47.129463000Z
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000433 main     OS Product: Linux
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000496 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000550 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000601 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000602 main     Process ID: 1268
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.000603 main     Package type: LINUX_64BITS_GENERIC
2026-04-18 05:36:49 (2268): Guest Log: 00:00:00.001851 main     5.2.32 r132073 started. Verbose level = 0
2026-04-18 05:36:49 (2268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-18 05:36:49 (2268): Guest Log: [INFO] Mounting shared directory
2026-04-18 05:36:49 (2268): Guest Log: [INFO] Checking for init_data.xml
2026-04-18 05:36:54 (2268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-18 05:36:54 (2268): Guest Log: [INFO] Detected branch: prod
2026-04-18 05:36:54 (2268): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-18 05:36:54 (2268): Guest Log: Copying input files
2026-04-18 05:36:57 (2268): Guest Log: Copied input files into RunAtlas.
2026-04-18 05:36:57 (2268): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-18 05:36:57 (2268): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-18 05:36:57 (2268): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-18 05:36:57 (2268): Guest Log: Further information can be found at the LHC@home message board.
2026-04-18 05:36:58 (2268): Guest Log: 00:00:10.008654 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 499 023 000ns (GuestNow=1 776 483 418 637 911 000 ns GuestLast=1 776 490 607 136 934 000 ns fSetTimeLastLoop=true )
2026-04-18 05:37:06 (2268): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-18 05:37:06 (2268): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-18 05:37:06 (2268): Guest Log: 2.6.3.0 1543 0 30060 158565 3 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-18 05:37:07 (2268): Guest Log: copied the webapp to /var/www
2026-04-18 05:37:07 (2268): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-18 05:37:07 (2268): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-18 05:37:08 (2268): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-18 05:37:08 (2268): Guest Log:  *** Starting ATLAS job. (PandaID=7098016168 taskID=49150353) ***
2026-04-18 07:23:11 (2268): Status Report: Elapsed Time: '6000.999176'
2026-04-18 07:23:11 (2268): Status Report: CPU Time: '11585.312500'
2026-04-18 09:08:50 (2268): Status Report: Elapsed Time: '12001.373480'
2026-04-18 09:08:50 (2268): Status Report: CPU Time: '23710.718750'
2026-04-18 10:54:46 (2268): Status Report: Elapsed Time: '18002.214285'
2026-04-18 10:54:46 (2268): Status Report: CPU Time: '35535.218750'
2026-04-18 12:41:10 (2268): Status Report: Elapsed Time: '24002.357355'
2026-04-18 12:41:10 (2268): Status Report: CPU Time: '47129.921875'
2026-04-18 14:26:54 (2268): Status Report: Elapsed Time: '30003.043112'
2026-04-18 14:26:54 (2268): Status Report: CPU Time: '58672.468750'
2026-04-18 16:11:33 (2268): Status Report: Elapsed Time: '36003.349499'
2026-04-18 16:11:33 (2268): Status Report: CPU Time: '70154.187500'
2026-04-18 17:43:17 (2268): Guest Log:  *** Job finished ***
2026-04-18 17:43:17 (2268): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:42:46,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:42:46,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:09,800 | INFO     | [monitor] cgroup control has ended
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:11,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163011012416)>', '<ExcThread(monitor, started 140162432497408)>']
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:12,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:12,082 | INFO     | [monitor] control thread has ended
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,518 | INFO     | all workflow threads have been joined
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,518 | INFO     | end of generic workflow (traces error code: 0)
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,518 | INFO     | traces error code: 0
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,694 [wrapper] ==== pilot stdout END ====
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,736 [wrapper] ==== wrapper stdout RESUME ====
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,771 [wrapper] pilotpid: 5920
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,807 [wrapper] Pilot exit status: 0
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,838 [wrapper] pandaids: 7098016168
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,924 [wrapper] cleanup supervisor_pilot  8076 5921
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,946 [wrapper] Test setup, not cleaning
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:16,972 [wrapper] apfmon messages muted
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:17,011 [wrapper] ==== wrapper stdout END ====
2026-04-18 17:43:17 (2268): Guest Log: 2026-04-18 15:43:17,018 [wrapper] ==== wrapper stderr END ====
2026-04-18 17:43:17 (2268): Guest Log:  *** Error codes and diagnostics ***
2026-04-18 17:43:17 (2268): Guest Log:     "exeErrorCode": 0,
2026-04-18 17:43:17 (2268): Guest Log:     "pilotErrorCode": 0,
2026-04-18 17:43:17 (2268): Guest Log:  *** Listing of results directory ***
2026-04-18 17:43:17 (2268): Guest Log: total 100316
2026-04-18 17:43:17 (2268): Guest Log: -rwx------. 1 atlas atlas    36322 Apr 16 16:03 runpilot2-wrapper.sh
2026-04-18 17:43:17 (2268): Guest Log: -rw-r--r--. 1 atlas atlas     5094 Apr 17 08:44 queuedata.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-r--r--. 1 atlas atlas   644190 Apr 17 08:44 pilot3.tar.gz
2026-04-18 17:43:17 (2268): Guest Log: -rwxr-xr-x. 1 atlas atlas     8968 Apr 18 03:36 init_data.xml
2026-04-18 17:43:17 (2268): Guest Log: -rwxr-xr-x. 1 atlas atlas   657125 Apr 18 03:36 input.tar.gz
2026-04-18 17:43:17 (2268): Guest Log: -rwxr-xr-x. 1 atlas atlas    15665 Apr 18 03:36 start_atlas.sh
2026-04-18 17:43:17 (2268): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Apr 18 03:36 EVNT.49150344._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-18 17:43:17 (2268): Guest Log: -rw-r--r--. 1 atlas atlas     2951 Apr 18 03:37 pandaJob.out
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas   996998 Apr 18 03:38 agis_schedconf.cvmfs.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas      425 Apr 18 03:38 workernode_map.json
2026-04-18 17:43:17 (2268): Guest Log: drwx------. 5 atlas atlas     4096 Apr 18 03:38 pilot3
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas 89198258 Apr 18 15:41 HITS.49150353._000019.pool.root.1
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas     1031 Apr 18 15:42 memory_monitor_summary.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas  1512404 Apr 18 15:42 agis_ddmendpoints.agis.ALL.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas   870133 Apr 18 15:42 log.49150353._000019.job.log.tgz.1
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas     7020 Apr 18 15:42 heartbeat_new.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas     6911 Apr 18 15:42 heartbeat.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas       95 Apr 18 15:42 pilot_heartbeat.json
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas     4800 Apr 18 15:43 pilotlog.txt
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas  3897823 Apr 18 15:43 log.49150353._000019.job.log.1
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas      353 Apr 18 15:43 output.list
2026-04-18 17:43:17 (2268): Guest Log: -rw-r--r--. 1 atlas atlas      410 Apr 18 15:43 runtime_log
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas  4782080 Apr 18 15:43 result.tar.gz
2026-04-18 17:43:17 (2268): Guest Log: -rw-r--r--. 1 atlas atlas     8389 Apr 18 15:43 runtime_log.err
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas      664 Apr 18 15:43 0847e0c92069.diag
2026-04-18 17:43:17 (2268): Guest Log: Looking for outputfile HITS.49150353._000019.pool.root.1
2026-04-18 17:43:17 (2268): Guest Log: HITS file was successfully produced
2026-04-18 17:43:17 (2268): Guest Log: -rw-------. 1 atlas atlas 89198258 Apr 18 15:41 /home/atlas/RunAtlas/HITS.49150353._000019.pool.root.1
2026-04-18 17:43:18 (2268): Guest Log: Successfully finished the ATLAS job!
2026-04-18 17:43:18 (2268): Guest Log: Copying the results back to the shared directory!
2026-04-18 17:43:19 (2268): Guest Log:  *** Contents of shared directory: ***
2026-04-18 17:43:19 (2268): Guest Log: total 421120
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root 336554926 Apr 18 03:36 ATLAS.root_0
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root  89198258 Apr 18 15:43 HITS.pool.root.1
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root      8968 Apr 18 03:36 init_data.xml
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root    657125 Apr 18 02:47 input.tar.gz
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root   4782080 Apr 18 15:43 result.tar.gz
2026-04-18 17:43:19 (2268): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 18 02:47 start_atlas.sh
2026-04-18 17:43:19 (2268): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-18 17:43:19 (2268): VM Completion File Detected.
2026-04-18 17:43:19 (2268): Powering off VM.
2026-04-18 17:43:20 (2268): Successfully stopped VM.
2026-04-18 17:43:20 (2268): Deregistering VM. (boinc_15cdb6e67b00267e, slot#3)
2026-04-18 17:43:20 (2268): Removing network bandwidth throttle group from VM.
2026-04-18 17:43:21 (2268): Removing VM from VirtualBox.
2026-04-18 17:43:26 (2268): called boinc_finish(0)

</stderr_txt>
]]>

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